Tea Tomljanović

A single mitochondrial haplotype and nuclear genetic differentiation in sympatric colour morphs of a riverine cichlid fish.

Some of the diversity of lacustrine cichlid fishes has been ascribed to sympatric divergence, whereas diversification in rivers is generally driven by vicariance and geographic isolation. In the riverine Pseudocrenilabrus philander species complex, several morphologically highly distinct populations are restricted to particular river systems, sinkholes and springs in southern Africa. One of these populations consists of a prevalent yellow morph in sympatry with a less frequent blue morph, and no individuals bear intermediate phenotypes. Genetic variation in microsatellites and AFLP markers was very low in both morphs and one single mtDNA haplotype was fixed in all samples, indicating a very young evolutionary age and small effective population size. Nevertheless, the nuclear markers detected low but significant differentiation between the two morphs. The data suggest recent and perhaps sympatric divergence in the riverine habitat.

Genetic composition of the Jadro softmouth trout following translocation into a new habitat

Genetic founder effects of a historical translocation (1965; app. 12 generations ago) of endangered softmouth trout from the only remaining indigenous population to an adjacent uninhabited river were investigated.A comparison of 15 microsatellites from contemporary samples in both the source and re-established populations indicated a very low level of genetic diversity within the two populations. Furthermore, considerable differences in estimates of variability and effective population sizes were detected between populations, but no recent bottlenecks were evident. Our data suggest that the re-established population has lost variation due to genetic drift associated with founder effects following the translocation. Accordingly, in relation to management, we suggest that the re-established population could serve as a secondary source of individuals to buffer possible extinction due to demographic events. Finally, conservation initiatives to enhance the census population size and increase levels of variability in the re-established population are proposed.

Developmental transcriptome analysis and identification of genes involved in formation of intestinal air-breathing function of Dojo loach, Misgurnus anguillicaudatus

Dojo loach, Misgurnus anguillicaudatus is a freshwater fish species of the loach family Cobitidae, using its posterior intestine as an accessory air-breathing organ. Little is known about the molecular regulatory mechanisms in the formation of intestinal air-breathing function of M. anguillicaudatus. Here high-throughput sequencing of mRNAs was performed from six developmental stages of posterior intestine of M. anguillicaudatus: 4-Dph (days post hatch) group, 8-Dph group, 12-Dph group, 20-Dph group, 40-Dph group and Oyd (one-year-old) group. These six libraries were assembled into 81300 unigenes. Totally 40757 unigenes were annotated. Subsequently, 35291 differentially expressed genes (DEGs) were scanned among different developmental stages and clustered into 20 gene expression profiles. Finally, 15 key pathways and 25 key genes were mined, providing potential targets for candidate gene selection involved in formation of intestinal air-breathing function in M. anguillicaudatus. This is the first report of developmental transcriptome of posterior intestine in M. anguillicaudatus, offering a substantial contribution to the sequence resources for this species and providing a deep insight into the formation mechanism of its intestinal air-breathing function. This report demonstrates that M. anguillicaudatus is a good model for studies to identify and characterize the molecular basis of accessory air-breathing organ development in fish.

Comparative proteomics analysis of teleost intermuscular bones and ribs provides insight into their development

BackgroundIntermuscular bones (IBs) and ribs both are a part of skeletal system in teleosts, but with different developing process. The chemical composition of fish IBs and ribs as well as the underlying mechanism about their development have not been investigated. In the present study, histological structures showed that one bone cavity containing osteoclasts were existed in ribs, but not in IBs of Megalobrama amblycephala. We constructed the first proteomics map for fish bones including IBs and ribs, and identified the differentially expressed proteins between IBs and ribs through iTRAQ LC-MS/MS proteomic analysis.ResultsThe proteins extracted from IBs and ribs at 1- to 2-year old M. amblycephala were quantified 2,342 proteins, with 1,451 proteins annotated with GO annotation in biological processes, molecular function and cellular component. A number of bone related proteins as well as pathways were identified in the study. A total of 93 and 154 differently expressed proteins were identified in comparison groups of 1-IB-vs-1-Rib and 2-IB-vs-2-Rib, which indicated the obvious differences of chemical composition between these two bone tissues. The two proteins (vitronectin b precursor and matrix metalloproteinase-2) related to osteoclasts differentiation were significantly up-regulated in ribs compared with IBs (P < 0.05), which was in accordance with the results from histological structures. In comparison groups of 1-IB-vs-2-IB and 1-Rib-vs-2-Rib, 33 and 51 differently expressed proteins were identified and the function annotation results showed that these proteins were involved in regulating bone development and differentiation. Subsequently, 11 and 13 candidate proteins in comparison group of 1-IB-vs-1-Rib and 1-IB-vs-2-IB related to bone development were validated by MRM assays.ConclusionsOur present study suggested the different key proteins involved in the composition of fish ribs and IBs as well as their growth development. These findings could provide important clues towards further understanding of fish skeletal system and the roles of proteins playing in regulating diverse biological processes in fish.

ZOOPLANKTON STRUCTURE IN TWO INTERCONNECTED PONDS: SIMILARITIES AND DIFFERENCES

Abstract The research of zooplankton diversity, abundance and trophic structure was conducted during the summer period in pelagial zone on the longitudinal profile of the Sutla River Backwater. Investigated site consists of two interconnected basins: transparent Upper Basin with submerged macrophytes and turbid Lower Basin without macrophytes in the littoral zone. In the Upper Basin, abundance and diversity of zooplankton in the pelagial was higher in comparison to the Lower Basin, with prevailing species of genus Keratella as microfilter-feeder, and genera of Polyartha and Trihocerca as macrofilter-feeder rotifers. On the contrary, in the Lower Basin, crustaceans dominated in abundance. Microfilter-feeder cladoceran (Bosmina longirostris) and larval and adult stages of macrofilter-feeder copepod (Macrocyclops albidus) prevailed in the Lower Basin. Fish predation pressure was more pronounced in the pelagial of the Upper Basin, indicated by low cladoceran abundance in the surface layer. Although the studied basins were interconnected, results indicate significant (Mann-Whitney U test, p < 0.05) differences in the zooplankton structure as a potential result of the macrophyte impact on environmental conditions and fish predation pressure.

First record of palmetto bass (Morone saxatilis x M. chrysops) in the Croatian part of the river Danube

On October 19, 2010, a male specimen of palmetto bass (Morone saxatilis x M. chrysops) was caught by commer- cial fishing net in the Croatian section of the river Danube (302 mm TL and 331 g). It was in its third year of age (2+). A condition factor of 1.20 was based on the total length. Six specimens of prey fish were found in its gut (22.97 g altogether). Morphometric and meristic traits of this palmetto bass are presented and its possible threat to the fish community is dis- cussed.

Microsatellite-based genetic variability and differentiation of hatchery and feral common carp Cyprinus carpio L. (Cyprinidae, Cypriniformes) populations in Croatia.

Common carp production has an important status in Croatian aquaculture. In addition, the sport fishing of common carp in open waters is very popular, but it is often based on stocking from fish farms. Using fifteen microsatellites, 243 individuals from 5 hatchery and 5 feral populations have been analyzed. A total number of 148 alleles were recorded. However, the mean number of alleles per locus was remarkably low. Pairwise FST values (0.026-0.130) were significant (P<0.01), demonstrating differentiation among populations. The Markov chain method test showed that all the popula- tions deviated from HWE (P <0.05). After sequential Bonferroni correction only the Vrana lake was in HWE in all the loci but MFW20. The factors that may result in genetic divergence and significant reduction of the observed heterozygosity are discussed. AMOVA results for 10 populations indicate that the percentage of the variation among populations was 6.26%, which is lower than the variation within populations (91.04%).

The common carp Cyprinus carpio in Croatia (Danube and Adriatic basins): a historical review

This review provides the first historical account of the ecology and biology of common carp Cyprinus carpio in the Danube and Adriatic basins of Croatia, and emphasises the species’ economic relevance and management implications. As a semi-native species that is native to the Danube but translocated across the Adriatic Basin, carp plays an important role for aquaculture, recreational and artisanal fisheries. However, original strains have now disappeared, and because of genetic pollution in inland waters there is an increasing demand for restoring populations of the now rare and threatened wild carp, making conservation measures a priority. Translocations of carp across water bodies of the Adriatic Basin mostly for food supply did not prove successful in the long term, as the resulting ecological impacts may have been higher than the expected economic advantages. Measures for the prevention of further (uncontrolled) carp re-stocking are therefore necessary and this will require closer collaboration between scientists and environmental managers.

Effects of dietary vitamin C and soybean lecithin in the nutrition of brown bullhead ( Ameiurus nebulosus L.) fingerlings

The effects of different forms of vitamin C and soybean lecithin on growth performance, feed utilization and body composition of brown bullhead (Ameiurus nebulosus, Lesuer 1819) were evaluated during a 9-week growth trial. A special interest was to investigate a possible combine effect of these nutritional components. The diets used contained three forms of vitamin C (crystallized ascorbic acid, encapsulated L-ascorbic acid and Ca-L-threonate) (100 mg/kg) with and without the combination of soybean lecithin. Besides control diet (K), one more diet was supplemented with soybean lecithin (L) only. One-hundred-ninety-two brown bullhead of about 45 g initial body weight was randomly divided in 24 tanks (115 L each). Testing conditions included 8 fish per tank, with triplicate tanks for treatment. All diets with supplemented components had higher final weight. Specific growth rate, feed conversion rate and condition factor were significantly higher with encapsulated vitamin C diets (CC, CCL), followed by the results of enriched ascorbic acid diets. Vitamin C and lecithin supplementation showed positive influence on significantly higher number of erythrocytes, haematocrit, triglycerides and total protein. Vitamin C content of muscle and liver tissue was not uniform and was significantly higher in AAL, CCL, CC and AA feeding groups. The fatty acids profile of muscle and liver tissue showed that phospholipids from soybean lecithin and vitamin C diets enhanced the quality of usable part of the fish body. Combine supplementation of vitamin C and soy lecithin indicated positive production effects, but did not cause a statistically significant difference.

Long-term analysis of fish assemblage structure in the middle section of the Sava River – The impact of pollution, flood protection and dam construction

At the beginning of the 20th century, the middle section of the Sava River in Croatia was unaffected by major human activities and rich in ichthyofauna. The Sava River was important for commercial and recreational fishing for the local population, which still remains today. However, the 1920s mining industry was established in Slovenia, which emitted carbon dust into the Sava River. At the same time, the construction of embankments to mitigate flooding started in the middle section. Furthermore, in the 1980s, the Krško nuclear power plant (NPP), and in the 2010s, the Krško hydropower plant (HPP) were built in Slovenia. These activities could have an impact on the composition of fish communities downstream from the major sources of disturbances. Therefore, the main aim of this paper were to analyze the changes in fish assemblages of the Sava River from 1978 to 2017, prior to and after the construction of Krško NPP and HPP at the Medsave site on the Sava River, 20 km downstream from the major construction operations. Collected data were divided into four sampling periods (SP): SP1, from 1978 to 1980; SP2, from 1991 to 1994; SP3, from 2001 to 2006, and SP4 from 2011 to 2017. Besides alien fish species, water quality and hydromorphological modifications were identified as significant stressors. In SP1 and SP2 limnophilic and eurytopic fish groups were predominant, and 26 different fish species were identified, but in SP3 and SP4 rheophilic fish groups become dominant, and the diversity has declined to 21 species. Threatened species blageon, Telestes souffia seems to be missing from the main course of the Sava River in last 20 years. It can be concluded that disturbances in the fish assemblage pattern have coincided with the presence of multiple stressors of human origin.