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Dive into the research topics where Tessa S. Cook is active.

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Featured researches published by Tessa S. Cook.


Radiographics | 2011

RADIANCE: An automated, enterprise-wide solution for archiving and reporting CT radiation dose estimates.

Tessa S. Cook; Stefan L. Zimmerman; Andrew D. A. Maidment; Woojin Kim; William W. Boonn

There is growing interest in the ability to monitor, track, and report exposure to radiation from medical imaging. Historically, however, dose information has been stored on an image-based dose sheet, an arrangement that precludes widespread indexing. Although scanner manufacturers are beginning to include dose-related parameters in the Digital Imaging and Communications in Medicine (DICOM) headers of imaging studies, there remains a vast repository of retrospective computed tomographic (CT) data with image-based dose sheets. Consequently, it is difficult for imaging centers to monitor their dose estimates or participate in the American College of Radiology (ACR) Dose Index Registry. An automated extraction software pipeline known as Radiation Dose Intelligent Analytics for CT Examinations (RADIANCE) has been designed that quickly and accurately parses CT dose sheets to extract and archive dose-related parameters. Optical character recognition of information in the dose sheet leads to creation of a text file, which along with the DICOM study header is parsed to extract dose-related data. The data are then stored in a relational database that can be queried for dose monitoring and report creation. RADIANCE allows efficient dose analysis of CT examinations and more effective education of technologists, radiologists, and referring physicians regarding patient exposure to radiation at CT. RADIANCE also allows compliance with the ACRs dose reporting guidelines and greater awareness of patient radiation dose, ultimately resulting in improved patient care and treatment.


Journal of The American College of Radiology | 2010

Automated Extraction of Radiation Dose Information for CT Examinations

Tessa S. Cook; Stefan L. Zimmerman; Andrew D. A. Maidment; Woojin Kim; William W. Boonn

Exposure to radiation as a result of medical imaging is currently in the spotlight, receiving attention from Congress as well as the lay press. Although scanner manufacturers are moving toward including effective dose information in the Digital Imaging and Communications in Medicine headers of imaging studies, there is a vast repository of retrospective CT data at every imaging center that stores dose information in an image-based dose sheet. As such, it is difficult for imaging centers to participate in the ACRs Dose Index Registry. The authors have designed an automated extraction system to query their PACS archive and parse CT examinations to extract the dose information stored in each dose sheet. First, an open-source optical character recognition program processes each dose sheet and converts the information to American Standard Code for Information Interchange (ASCII) text. Each text file is parsed, and radiation dose information is extracted and stored in a database which can be queried using an existing pathology and radiology enterprise search tool. Using this automated extraction pipeline, it is possible to perform dose analysis on the >800,000 CT examinations in the PACS archive and generate dose reports for all of these patients. It is also possible to more effectively educate technologists, radiologists, and referring physicians about exposure to radiation from CT by generating report cards for interpreted and performed studies. The automated extraction pipeline enables compliance with the ACRs reporting guidelines and greater awareness of radiation dose to patients, thus resulting in improved patient care and management.


IEEE Transactions on Medical Imaging | 2011

Point Set Registration Using Havrda–Charvat–Tsallis Entropy Measures

Nicholas J. Tustison; Suyash P. Awate; Gang Song; Tessa S. Cook; James C. Gee

We introduce a labeled point set registration algorithm based on a family of novel information-theoretic measures derived as a generalization of the well-known Shannon entropy. This generalization, known as the Havrda-Charvat-Tsallis entropy, permits a fine-tuning between solution types of varying degrees of robustness of the divergence measure between multiple point sets. A variant of the traditional free-form deformation approach, known as directly manipulated free-form deformation, is used to model the transformation of the registration solution. We provide an overview of its open source implementation based on the Insight Toolkit of the National Institutes of Health. Characterization of the proposed framework includes comparison with other state of the art kernel-based methods and demonstration of its utility for lung registration via labeled point set representation of lung anatomy.


Journal of Digital Imaging | 2016

PORTER: a Prototype System for Patient-Oriented Radiology Reporting.

Seong Cheol Oh; Tessa S. Cook; Charles E. Kahn

To empower patients to participate in their medical care and decision-making, effective communication is critical. In radiology, the clinical report is the primary medium of communication. Although radiologists historically have authored reports with the referring provider as the intended reader, patients increasingly access the reports through portals to electronic health record systems. We developed a system named PORTER (Patient-Oriented Radiology Reporter) to augment radiology reports with lay-language definitions. Our IRB-approved, HIPAA-compliant study protocol analyzed 100 knee MRI reports from an academic medical center to identify the most commonly utilized terms. A glossary of 313 terms was constructed to include definitions of the terms and, where available, links to reference sources and public-domain images. Flesch-Kincaid readability scores were computed to assure that definitions were readable at or below 10th-grade reading level. The system provided an interactive web site to view outpatient knee MRI exams. After logging in with their exam ID number and date of birth, patients viewed their report annotated with definitions from the glossary. Applicable images were displayed when the user’s mouse hovered over a glossary term. This patient-oriented system can help empower patients to better understand their radiology results.


Journal of The American College of Radiology | 2014

Business Intelligence for the Radiologist: Making Your Data Work for You

Tessa S. Cook; Paul Nagy

Although it remains absent from most programs today, business intelligence (BI) has become an integral part of modern radiology practice management. BI facilitates the transition away from lack of understanding about a system and the data it produces toward incrementally more sophisticated comprehension of what has happened, could happen, and should happen. The individual components that make up BI are common across industries and include data extraction and transformation, process analysis and improvement, outcomes measures, performance assessment, graphical dashboarding, alerting, workflow analysis, and scenario modeling. As in other fields, these components can be directly applied in radiology to improve workflow, throughput, safety, efficacy, outcomes, and patient satisfaction. When approaching the subject of BI in radiology, it is important to know what data are available in your various electronic medical records, as well as where and how they are stored. In addition, it is critical to verify that the data actually represent what you think they do. Finally, it is critical for success to identify the features and limitations of the BI tools you choose to use and to plan your practice modifications on the basis of collected data. It is equally important to remember that BI plays a critical role in continuous process improvement; whichever BI tools you choose should be flexible to grow and evolve with your practice.


American Journal of Roentgenology | 2015

Cardiac CT Angiography in the Emergency Department

Maya Galperin-Aizenberg; Tessa S. Cook; Judd E. Hollander; Harold I. Litt

OBJECTIVE. Nearly 8 million patients present annually to emergency departments (EDs) in the United States with acute chest pain. Identifying those with a sufficiently low risk of acute coronary syndrome (ACS) remains challenging. Early imaging is important for risk stratification of these individuals. The objective of this article is to discuss the role of cardiac CT angiography (CTA) as a safe, efficient, and cost-effective tool in this setting and review state-of-the-art technology, protocols, advantages, and limitations from the perspective of our institutions 10-year experience. CONCLUSION. Early utilization of cardiac CTA in patients presenting to the ED with chest pain and a low to intermediate risk of ACS quickly identifies a group of particularly low-risk patients (< 1% risk of adverse events within 30 days) and allows safe and expedited discharge. By preventing unnecessary admissions and prolonged lengths of stay, a strategy based on early cardiac CTA has been shown to be efficient, although potential overutilization and other issues require long-term study.


Magnetic Resonance Imaging Clinics of North America | 2011

Normal and Variant Anatomy of the Wrist and Hand on MR Imaging

Joel Stein; Tessa S. Cook; Stephanie Simonson; Woojin Kim

Magnetic resonance imaging is the optimal modality for characterizing the ligaments, tendons, muscles, and neurovascular structures of the wrist and hand. Continued refinement in pulse sequence and coil design permits high-resolution examination of the many small structures and complex anatomy of this region. In this context, frequent anatomic variants and common false positives such as normal areas of high signal intensity in ligaments and tendons must be recognized to avoid misdiagnosis and improper treatment. This article discusses the osseous and soft tissue anatomy of the wrist and hand, as well as normal variants.


medical image computing and computer assisted intervention | 2007

How do registration parameters affect quantitation of lung kinematics

Tessa S. Cook; Nicholas J. Tustison; Jürgen Biederer; Ralf Tetzlaff; James C. Gee

Assessing the quality of motion estimation in the lung remains challenging. We approach the problem by imaging isolated porcine lungs within an artificial thorax with four-dimensional computed tomography (4DCT). Respiratory kinematics are estimated via pairwise non-rigid registration using different metrics and image resolutions. Landmarks are manually identified on the images and used to assess accuracy by comparing known displacements to the registration-derived displacements. We find that motion quantitation becomes less precise as the inflation interval between images increases. In addition, its sensitivity to image resolution varies anatomically. Mutual information and cross-correlation perform similarly, while mean squares is significantly poorer. However, none of the metrics compensate for the difficulty of registering over a large inflation interval. We intend to use the results of these experiments to more effectively and efficiently quantify pulmonary kinematics in future, and to explore additional parameter combinations.


Magnetic Resonance Imaging Clinics of North America | 2011

Normal and Variant Anatomy of the Elbow on Magnetic Resonance Imaging

Joel Stein; Tessa S. Cook; Stephanie Simonson; Woojin Kim

Magnetic resonance imaging (MRI) provides excellent delineation of the bones of the elbow and the surrounding soft tissue structures. The components of the elbow can be divided into osseous structures, the joint capsule and ligaments, muscles and tendons, and nerves. In this article, the authors review the normal anatomy and appearance of these structures on MRI as well as the anatomic variants that should be recognized and distinguished from pathologic entities.


Academic Radiology | 2011

Pulmonary Kinematics From Image Data: A Review

Nicholas J. Tustison; Tessa S. Cook; Gang Song; James C. Gee

The effects of certain lung pathologies include alterations in lung physiology negatively affecting pulmonary compliance. Current approaches to diagnosis and treatment assessment of lung disease commonly rely on pulmonary function testing. Such testing is limited to global measures of lung function, neglecting regional measurements, which are critical for early diagnosis and localization of disease. Increased accessibility to medical image acquisition strategies with high spatiotemporal resolution coupled with the development of sophisticated intensity-based and geometric registration techniques has resulted in the recent exploration of modeling pulmonary motion for calculating local measures of deformation. In this review, the authors provide a broad overview of such research efforts for the estimation of pulmonary deformation. This includes discussion of various techniques, current trends in validation approaches, and the public availability of software and data resources.

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Woojin Kim

Hospital of the University of Pennsylvania

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William W. Boonn

University of Pennsylvania

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Stefan L. Zimmerman

Johns Hopkins University School of Medicine

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Hanna M. Zafar

Hospital of the University of Pennsylvania

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Darco Lalevic

Hospital of the University of Pennsylvania

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James C. Gee

University of Pennsylvania

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Mary H. Scanlon

University of Pennsylvania

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Po-Hao Chen

Hospital of the University of Pennsylvania

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