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Dive into the research topics where Theodore J. Catino is active.

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Featured researches published by Theodore J. Catino.


Bioinformatics | 1999

ProbeDesigner: for the design of probesets for branched DNA (bDNA) signal amplification assays.

Steven Bushnell; J. Budde; Theodore J. Catino; Jack Cole; A. Derti; R. Kelso; M. L. Collins; G. Molino; P. Sheridan; John E. Monahan; M. Urdea

MOTIVATION The sensitivity and specificity of branched DNA (bDNA) assays are derived in part through the judicious design of the capture and label extender probes. To minimize non-specific hybridization (NSH) events, which elevate assay background, candidate probes must be computer screened for complementarity with generic sequences present in the assay. RESULTS We present a software application which allows for rapid and flexible design of bDNA probesets for novel targets. It includes an algorithm for estimating the magnitude of NSH contribution to background, a mechanism for removing probes with elevated contributions, a methodology for the simultaneous design of probesets for multiple targets, and a graphical user interface which guides the user through the design steps. AVAILABILITY The program is available as a commercial package through the Pharmaceutical Drug Discovery program at Chiron Diagnostics.


Archive | 2004

Novel human genes and gene expression products

Jon H. Astle; Lisa Allyn Boardman; Lawrence J. Burgart; Christopher C. Burgess; Theodore J. Catino; Poornima Dwivedi; Marcia E. Lewis; Gary A. Molino; Susan H. Myerow; Arunthathi Thiagalingam; Stephen N. Thibodeau


Archive | 2003

Detection methods using TIMP 1 for colon cancer diagnosis

Jon H. Astle; Lisa Allyn Boardman; Sheryl Lynn Andrea Brown-Shimer; Lawrence J. Bugart; Christopher C. Burgess; Theodore J. Catino; Poornima Dwivedi; Maryanne Huntress; Karen Anne Johnson; Marcia E. Lewis; Peter J. Maimonis; Gary A. Molino; Susan H. Myerow; Arunthathi Thiagalingam; Stephen N. Thibodeau


Archive | 2001

Nucleic acid sequences differentially expressed in cancer tissue

Christopher C. Burgess; John H. Astle; Eddie Carroll; Theodore J. Catino; Poornima Dwivedi; Gary A. Molino; Arunthathi Thiagalingam; Marcia E. Lewis


Archive | 1999

Human genes differentially expressed in colon cancer

Wilson O. Endege; Kathleen E. Steinmann; Jon H. Astle; Christopher C. Burgess; Steven E. Bushnell; Eddie Carroll; Theodore J. Catino; Adnan Derti; Donna Ford; Marcia E. Lewis; John E. Monahan; Robert Schlegel


Archive | 1999

Human genes differentially expressed in colorectal cancer

Wilson O. Endege; Kathleen E. Steinmann; Jon H. Astle; Christopher C. Burgess; Eddie Carroll; Theodore J. Catino; Poornima Dwivedi; Donna Ford; Marcia E. Lewis; Gary A. Molino; John E. Monahan; Robert Schlegel


Archive | 2002

Novel human genes and gene expression products: II

Jon H. Astle; Christopher C. Burgess; Theodore J. Catino; Poornima Dwivedi; Marcia E. Lewis; Gary A. Molino; Susan H. Myerow; Arunthathi Thiagalingam


Archive | 2001

Method for detecting a differentially expressed sequence

Jon H. Astle; Christopher C. Burgess; Theodore J. Catino; Poornima Dwivedi; Marcia E. Lewis; Gary A. Molino; Susan H. Myerow; Arunthathi Thiagalingam; Stephen N. Thibodeau; Lawrence J. Burgart; Lisa Allyn Boardman


Archive | 2005

Differential expression of genes in microsatellite instability

Christopher C. Burgess; Theodore J. Catino; Gary A. Molino; Susan H. Myerow; Arunthathi Thiagalingam; Stephen N. Thibodeau; Lisa Allyn Boardman; Lawrence J. Burgart; Marcia E. Lewis


Archive | 2003

Detection method using timp1

Jon H. Astle; Lisa A. Boardman; Sheryl Brown-Shimer; Lawrence J. Bugart; Christopher C. Burgess; Theodore J. Catino; Poornima Dwivedi; Maryanne Huntress; Karen A. Johnson; Marcia E. Lewis; Peter Maimonis; Gary A. Molino; Susan H. Myerow; Arunthathi Thiagalingam; Stephen N. Thibodeau; シアガリンガム アランザッシ; アン ジョンソン カレン; シー. バージェス クリストファー; エイ. モリノ ゲイリイ; リン アンドレア ブラウン−シメール シェリル; ジェー. カティーノ シオドア; エイチ. アスツル ジョン; エイチ. マイアロウ スーザン; エヌ. シボドゥ スティーブン; ジェー. メイモニス ピーター; ドウィヴェディ プルニマ; イー. ルイス マーシャ; ハントレス メリーアン; アライン ボードマン リサ; ジェー. バガート ローレンス

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