Thomas D. O'Sullivan
Stanford University
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Featured researches published by Thomas D. O'Sullivan.
Cancer Research | 2012
Shigeto Ueda; Darren Roblyer; Albert E. Cerussi; Amanda Durkin; Anais Leproux; Ylenia Santoro; Shanshan Xu; Thomas D. O'Sullivan; David Hsiang; Rita S. Mehta; John Butler; Bruce J. Tromberg
Tissue hemoglobin oxygen saturation (i.e., oxygenation) is a functional imaging endpoint that can reveal variations in tissue hypoxia, which may be predictive of pathologic response in subjects undergoing neoadjuvant chemotherapy. In this study, we used diffuse optical spectroscopic imaging (DOSI) to measure concentrations of oxyhemoglobin (ctO(2)Hb), deoxy-hemoglobin (ctHHb), total Hb (ctTHb = ctO(2)Hb + ctHHb), and oxygen saturation (stO(2) = ctO(2)Hb/ctTHb) in tumor and contralateral normal tissue from 41 patients with locally advanced primary breast cancer. Measurements were acquired before the start of neoadjuvant chemotherapy. Optically derived parameters were analyzed separately and in combination with clinical biomarkers to evaluate correlations with pathologic response. Discriminant analysis was conducted to determine the ability of optical and clinical biomarkers to classify subjects into response groups. Twelve (28.6%) of 42 tumors achieved pathologic complete response (pCR) and 30 (71.4%) were non-pCR. Tumor measurements in pCR subjects had higher stO(2) levels (median 77.8%) than those in non-pCR individuals (median 72.3%, P = 0.01). There were no significant differences in baseline ctO(2)Hb, ctHHb, and ctTHb between response groups. An optimal tumor oxygenation threshold of stO(2) = 76.7% was determined for pCR versus non-pCR (sensitivity = 75.0%, specificity = 73.3%). Multivariate discriminant analysis combining estrogen receptor staining and stO(2) further improved the classification of pCR versus non-pCR (sensitivity = 100%, specificity = 85.7%). These results show that elevated baseline tumor stO(2) are correlated with a pCR. Noninvasive DOSI scans combined with histopathology subtyping may aid in stratification of individual patients with breast cancer before neoadjuvant chemotherapy.
Breast Cancer Research | 2013
Thomas D. O'Sullivan; Anais Leproux; Jeon-Hor Chen; Shadfar Bahri; Alex Matlock; Darren Roblyer; Christine E. McLaren; Wen-Pin Chen; Albert E. Cerussi; Min-Ying Su; Bruce J. Tromberg
IntroductionIn addition to being a risk factor for breast cancer, breast density has beenhypothesized to be a surrogate biomarker for predicting response toendocrine-based chemotherapies. The purpose of this study was to evaluate whethera noninvasive bedside scanner based on diffuse optical spectroscopic imaging(DOSI) provides quantitative metrics to measure and track changes in breast tissuecomposition and density. To access a broad range of densities in a limited patientpopulation, we performed optical measurements on the contralateral normal breastof patients before and during neoadjuvant chemotherapy (NAC). In this work, DOSIparameters, including tissue hemoglobin, water, and lipid concentrations, wereobtained and correlated with magnetic resonance imaging (MRI)-measuredfibroglandular tissue density. We evaluated how DOSI could be used to assessbreast density while gaining new insight into the impact of chemotherapy on breasttissue.MethodsThis was a retrospective study of 28 volunteers undergoing NAC treatment forbreast cancer. Both 3.0-T MRI and broadband DOSI (650 to 1,000 nm) were obtainedfrom the contralateral normal breast before and during NAC. Longitudinal DOSImeasurements were used to calculate breast tissue concentrations of oxygenated anddeoxygenated hemoglobin, water, and lipid. These values were compared withMRI-measured fibroglandular density before and during therapy.ResultsWater (r = 0.843; P < 0.001), deoxyhemoglobin (r =0.785; P = 0.003), and lipid (r = -0.707; P = 0.010)concentration measured with DOSI correlated strongly with MRI-measured densitybefore therapy. Mean DOSI parameters differed significantly between pre- andpostmenopausal subjects at baseline (water, P < 0.001;deoxyhemoglobin, P = 0.024; lipid, P = 0.006). During NACtreatment measured at about 90 days, significant reductions were observed inoxyhemoglobin for pre- (-20.0%; 95% confidence interval (CI), -32.7 to -7.4) andpostmenopausal subjects (-20.1%; 95% CI, -31.4 to -8.8), and water concentrationfor premenopausal subjects (-11.9%; 95% CI, -17.1 to -6.7) compared with baseline.Lipid increased slightly in premenopausal subjects (3.8%; 95% CI, 1.1 to 6.5), andwater increased slightly in postmenopausal subjects (4.4%; 95% CI, 0.1 to 8.6).Percentage change in water at the end of therapy compared with baseline correlatedstrongly with percentage change in MRI-measured density (r = 0.864; P = 0.012).ConclusionsDOSI functional measurements correlate with MRI fibroglandular density, bothbefore therapy and during NAC. Although from a limited patient dataset, theseresults suggest that DOSI may provide new functional indices of density based onhemoglobin and water that could be used at the bedside to assess response totherapy and evaluate disease risk.
Biomedical Optics Express | 2012
Albert E. Cerussi; Robert V. Warren; Brian Hill; Darren Roblyer; Ana s Leproux; Amanda Durkin; Thomas D. O'Sullivan; Sam Keene; Hosain Haghany; Timothy Quang; William M. Mantulin; Bruce J. Tromberg
Tissue simulating phantoms are an important part of instrumentation validation, standardization/training and clinical translation. Properly used, phantoms form the backbone of sound quality control procedures. We describe the development and testing of a series of optically turbid phantoms used in a multi-center American College of Radiology Imaging Network (ACRIN) clinical trial of Diffuse Optical Spectroscopic Imaging (DOSI). The ACRIN trial is designed to measure the response of breast tumors to neoadjuvant chemotherapy. Phantom measurements are used to determine absolute instrument response functions during each measurement session and assess both long and short-term operator and instrument reliability.
Optics Express | 2010
Thomas D. O'Sullivan; Elizabeth Munro; Natesh Parashurama; Conca C; Sanjiv S. Gambhir; James S. Harris; Ofer Levi
We have fabricated miniature implantable fluorescence sensors for continuous fluorescence sensing applications in living subjects. These monolithically integrated GaAs-based sensors incorporate a 675 nm vertical-cavity surface-emitting laser (VCSEL), a GaAs PIN photodiode, and a fluorescence emission filter. We demonstrate high detection sensitivity for Cy5.5 far-red dye (50 nanoMolar) in living tissue, limited by the intrinsic background autofluorescence. These low cost, sensitive and scalable sensors are promising for long-term continuous monitoring of molecular dynamics for biomedical studies in freely moving animals.
Semiconductor Science and Technology | 2011
James S. Harris; Thomas D. O'Sullivan; Tomas Sarmiento; Meredith M. Lee; Sonny Vo
Vertical cavity surface emitting lasers (VCSELs) emitting at 850 nm have experienced explosive growth in the past decade because of their many attractive optical features and incredibly low-cost manufacturability. This review reviews the foundations for GaAs-based VCSEL technology as well as the materials and device challenges to extend the operating wavelength to both shorter and longer wavelengths. We discuss some of the applications that are enabled by the integration of VCSELs with both active and passive semiconductor elements for telecommunications, both in vivo and in vitro biosensing, high-density optical storage and imaging at wavelengths much less than the diffraction limit of light.
Cancer Research | 2016
Bruce J. Tromberg; Zheng Zhang; Anais Leproux; Thomas D. O'Sullivan; Albert E. Cerussi; Philip M. Carpenter; Rita S. Mehta; Darren Roblyer; Wei Yang; Keith D. Paulsen; Brian W. Pogue; Shudong Jiang; Peter A. Kaufman; Arjun G. Yodh; So Hyun Chung; Mitchell D. Schnall; Bradley S. Snyder; Nola M. Hylton; David A. Boas; Stefan A. Carp; Steven J. Isakoff; David A. Mankoff
The prospective multicenter ACRIN 6691 trial was designed to evaluate whether changes from baseline to mid-therapy in a diffuse optical spectroscopic imaging (DOSI)-derived imaging endpoint, the tissue optical index (TOI), predict pathologic complete response (pCR) in women undergoing breast cancer neoadjuvant chemotherapy (NAC). DOSI instruments were constructed at the University of California, Irvine (Irvine, CA), and delivered to six institutions where 60 subjects with newly diagnosed breast tumors (at least 2 cm in the longest dimension) were enrolled over a 2-year period. Bedside DOSI images of the tissue concentrations of deoxy-hemoglobin (ctHHb), oxy-hemoglobin (ctHbO2), water (ctH2O), lipid, and TOI (ctHHb × ctH2O/lipid) were acquired on both breasts up to four times during NAC treatment: baseline, 1-week, mid-point, and completion. Of the 34 subjects (mean age 48.4 ± 10.7 years) with complete, evaluable data from both normal and tumor-containing breast, 10 (29%) achieved pCR as determined by central pathology review. The percent change in tumor-to-normal TOI ratio (%TOITN) from baseline to mid-therapy ranged from -82% to 321%, with a median of -36%. Using pCR as the reference standard and ROC curve methodology, %TOITN AUC was 0.60 (95% CI, 0.39-0.81). In the cohort of 17 patients with baseline tumor oxygen saturation (%StO2) greater than the 77% population median, %TOITN AUC improved to 0.83 (95% CI, 0.63-1.00). We conclude that the combination of baseline functional properties and dynamic optical response shows promise for clinical outcome prediction. Cancer Res; 76(20); 5933-44. ©2016 AACR.
Neurochemistry International | 2015
Tatiana B. Krasieva; Jennifer L. Ehren; Thomas D. O'Sullivan; Bruce J. Tromberg; Pamela Maher
Over the last few years, we have identified an orally active, novel neuroprotective and cognition-enhancing molecule, the flavonoid fisetin. Fisetin not only has direct antioxidant activity but it can also increase the intracellular levels of glutathione, the major intracellular antioxidant. Fisetin can also activate key neurotrophic factor signaling pathways. In addition, it has anti-inflammatory activity against microglia and astrocytes and inhibits the activity of lipoxygenases, thereby reducing the production of pro-inflammatory eicosanoids and their by-products. However, key questions about its targets and brain penetration remain. In this study, we used label-free two-photon microscopy of intrinsic fisetin fluorescence to examine the localization of fisetin in living nerve cells and the brains of living mice. In cells, fisetin but not structurally related flavonols with different numbers of hydroxyl groups, localized to the nucleoli suggesting that key targets of fisetin may reside in this organelle. In the mouse brain, following intraperitoneal injection and oral administration, fisetin rapidly distributed to the blood vessels of the brain followed by a slower dispersion into the brain parenchyma. Thus, these results provide further support for the effects of fisetin on brain function. In addition, they suggest that label-free two-photon microscopy may prove useful for studying the intracellular and tissue distribution of other intrinsically-fluorescent flavonoids.
International Journal of Obesity | 2016
Goutham Ganesan; Robert V. Warren; A Leproux; Montana Compton; K Cutler; S Wittkopp; G Tran; Thomas D. O'Sullivan; Shaista Malik; Pietro Galassetti; Bruce J. Tromberg
Background:Changes in subcutaneous adipose tissue (AT) structure and metabolism have been shown to correlate with the development of obesity and related metabolic disorders. Measurements of AT physiology could provide new insight into metabolic disease progression and response to therapy. An emerging functional imaging technology, diffuse optical spectroscopic imaging (DOSI), was used to obtain quantitative measures of near infrared (NIR) AT optical and physiological properties.Methods:Ten overweight or obese adults were assessed during 3 months on calorie-restricted diets. DOSI-derived tissue concentrations of hemoglobin, water and lipid and the wavelength-dependent scattering amplitude (A) and slope (b) obtained from 30 abdominal locations and three time points (T0, T6, T12) were calculated and analyzed using linear mixed-effects models and were also used to form 3D surface images.Results:Subjects lost a mean of 11.7±3.4% of starting weight, while significant changes in A (+0.23±0.04 mm−1, adj. P<0.001),b (−0.17±0.04, adj. P<0.001), tissue water fraction (+7.2±1.1%, adj. P<0.001) and deoxyhemoglobin (1.1±0.3 μM, adj. P<0.001) were observed using mixed-effect model analysis.Discussion:Optical scattering signals reveal alterations in tissue structure that possibly correlate with reductions in adipose cell volume, while water and hemoglobin dynamics suggest improved AT perfusion and oxygen extraction. These results suggest that DOSI measurements of NIR optical and physiological properties could be used to enhance understanding of the role of AT in metabolic disorders and provide new strategies for diagnostic monitoring of obesity and weight loss.
international solid-state circuits conference | 2011
Roxana T. Heitz; David B. Barkin; Thomas D. O'Sullivan; Natesh Parashurama; Sanjiv S. Gambhir; Bruce A. Wooley
Optical molecular imaging is emerging as a powerful preclinical research tool for investigating and quantifying molecular events in living subjects, with applications including earlier detection of disease, therapeutic monitoring and understanding fundamental biology [1]. For example, imaging the fluorescent molecular probe RGD-Cy5.5, which specifically binds to molecules (αvβ3 integrin receptors) that regulate new blood vessel growth in tumors, can be used to quantify this growth [2]. Capturing the fluorescent signal in living subjects with an implanted biosensor would enable continuous monitoring of tumors in freely moving subjects. Continuous monitoring in the setting of cancer would give valuable information on tumor progression, both in assessing drug efficacy and detecting recurrent tumor growth after treatment. Presently, fluorescence imaging in living subjects is performed with bulky instrumentation that does not permit continuous monitoring of freely moving subjects over long time periods. In order to make a fluorescence-detection system implantable, and portable, a laser excitation source, a photodetector and a readout circuit for measuring and digitizing photocurrents are integrated in a single package, and continuous fluorescence detection is demonstrated in live animals.
Scopus | 2009
Thomas D. O'Sullivan; Elizabeth Munro; Adam de la Zerda; Natesh Parashurama; Robert Teed; Zachary Walls; Ofer Levi; Sanjiv S. Gambhir; James S. Harris
We present the design and fabrication of an implantable fluorescence biosensor suitable for continuously monitored, freely-moving in vivo rodent studies. The GaAs-based semiconductor sensor incorporates an un-cooled photodetector with a 670nm vertical-cavity surface-emitting laser (VCSEL) optimized for sensing fluorescent Cy5.5 dye. For filtering unwanted spectra, a combination of physical and spectral blocking layers yields OD5 excitation rejection at the detector. The sensor detects near-IR fluorescent Cy5.5 molecules in vitro at 100nM concentration (in a 100μL volume) with linear response for concentrations up to 25μM. In a preliminary study in a living mouse, subcutaneously injected dye (1μM Cy5.5 in 50μL) was detected. This technology has the potential to enable new studies of living systems in applications that require long-term, continuous fluorescence sensing.