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Dive into the research topics where Thomas R. Covey is active.

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Featured researches published by Thomas R. Covey.


Journal of Chromatography A | 1988

On-line capillary zone electrophoresis-ion spray tandem mass spectrometry for the determination of dynorphins

Edgar D. Lee; Wolfgang M. Mück; Jack D. Henion; Thomas R. Covey

Capillary zone electrophoresis-mass spectrometry and capillary zone electrophoresis-tandem mass spectrometry with ionization at atmospheric pressure are demonstrated as being feasible for the separation and determination of small peptides such as dynorphins (1-6, 1-7, 1-8, 1-9) and leucine enkephalin at low picomole levels by full-scan mass spectrometry and tandem mass spectrometry and at the low femtomole range under selected ion monitoring conditions. Ion evaporation resulting from the ion spray liquid chromatography-mass spectrometry interface exhibits primarily molecular weight information as singly and multiply charged ions and is shown to be a sensitive and mild ionization method for peptides. The full-scan daughter ion mass spectrum of leucine enkephalin is shown to contain fragment ions consistent with the sequence of the peptide. Parent ion scanning in the tandem mass spectrometry mode is a promising technique for the screening of related peptides.


Analytical Chemistry | 2008

Comparison of drug distribution images from whole-body thin tissue sections obtained using desorption electrospray ionization tandem mass spectrometry and autoradiography.

Vilmos Kertesz; Gary J. Van Berkel; Marissa Vavrek; Kenneth A. Koeplinger; Bradley B. Schneider; Thomas R. Covey

Desorption electrospray ionization tandem mass spectrometry (DESI-MS/MS) and whole-body autoradiography (WBA) were used for chemical imaging of whole-body thin tissue sections of mice intravenously dosed with propranolol (7.5 mg/kg). DESI-MS/MS imaging utilized selected reaction monitoring detection performed on an AB/MDS SCIEX 4000 QTRAP mass spectrometer equipped with a prototype extended length particle discriminator interface. Propranolol images of the tissue sections using DESI-MS/MS were obtained at surface scan rates of 0.1, 0.5, 2, and 7 mm/s. Although signal decreased with increasing scan rate, useful whole-body images for propranolol were obtained from the tissues even at 7 mm/s, which required just 79 min of analysis time. Attempts to detect and image the distribution of the known propranolol metabolites were unsuccessful. Regions of the tissue sections showing the most radioactivity from WBA sections were excised and analyzed by high-performance liquid chromatography (HPLC) with radiochemical detection to determine relative levels of propranolol and metabolites present. Comparison of the DESI-MS/MS signal for propranolol and the radioactivity attributed to propranolol from WBA sections indicated nominal agreement between the two techniques for the amount of propranolol in the brain, lung, and liver. Data from the kidney showed an unexplained disparity between the two techniques. The results of this study show the feasibility of using DESI-MS/MS to obtain useful chemical images of a drug in whole-body thin tissue sections following drug administration at a pharmacologically relevant level. Further optimization to improve sensitivity and enable detection of the drug metabolites will be among the requirements necessary to move DESI-MS/MS chemical imaging forward as a practical tool in drug discovery.


Analytical Chemistry | 2010

Chemical effects in the separation process of a differential mobility/mass spectrometer system.

Bradley B. Schneider; Thomas R. Covey; Stephen L. Coy; Evgeny Krylov; Erkinjon G. Nazarov

In differential mobility spectrometry (also referred to as high-field asymmetric waveform ion mobility spectrometry), ions are separated on the basis of the difference in their mobility under high and low electric fields. The addition of polar modifiers to the gas transporting the ions through a differential mobility spectrometer enhances the formation of clusters in a field-dependent way and thus amplifies the high- and low-field mobility difference, resulting in increased peak capacity and separation power. Observations of the increase in mobility field dependence are consistent with a cluster formation model, also referred to as the dynamic cluster-decluster model. The uniqueness of chemical interactions that occur between an ion and cluster-forming neutrals increases the selectivity of the separation, and the depression of low-field mobility relative to high-field mobility increases the compensation voltage and peak capacity. The effect of a polar modifier on the peak capacity across a broad range of chemicals has been investigated. We discuss the theoretical underpinnings which explain the observed effects. In contrast to the result with a polar modifier, we find that using mixtures of inert gases as the transport gas improves the resolution by reducing the peak width but has very little effect on the peak capacity or selectivity. The inert gas helium does not cluster and thus does not reduce low-field mobility relative to high-field mobility. The observed changes in the differential mobility alpha parameter exhibited by different classes of compounds when the transport gas contains a polar modifier or has a significant fraction of inert gas can be explained on the basis of the physical mechanisms involved in the separation processes.


Journal of the American Society for Mass Spectrometry | 2006

Design considerations for high speed quantitative mass spectrometry with MALDI ionization

Jay J. Corr; Peter Kovarik; Bradley B. Schneider; Jan Hendrikse; Alexander Loboda; Thomas R. Covey

A MALDI ion source on a triple quadrupole mass spectrometer constructed for the purpose of obtaining high speed quantitative measurements on drugs and other low molecular weight compounds is described. Particular attention is given to the ion generation and transport phenomena that affect analysis speed, throughput, and practical instrument robustness. In this regard parameters that affect desorption speed, beam spreading, ion flight times, sensitivity, signal-to-noise, ion fragmentation, sample carry-over, and instrument contamination are examined and experimental results are provided. MALDI and electrospray sensitivity is compared, to provide a practical frame of reference.


European Journal of Mass Spectrometry | 2010

Control of Chemical Effects in the Separation Process of a Differential Mobility Mass Spectrometer System

Bradley B. Schneider; Thomas R. Covey; Stephen L. Coy; Evgeny V. Krylov; Erkinjon G. Nazarov

Differential mobility spectrometry (DMS) separates ions on the basis of the difference in their migration rates under high versus low electric fields. Several models describing the physical nature of this field mobility dependence have been proposed but emerging as a dominant effect is the clusterization model sometimes referred to as the dynamic cluster–decluster model. DMS resolution and peak capacity is strongly influenced by the addition of modifiers which results in the formation and dissociation of clusters. This process increases selectivity due to the unique chemical interactions that occur between an ion and neutral gas-phase molecules. It is thus imperative to bring the parameters influencing the chemical interactions under control and find ways to exploit them in order to improve the analytical utility of the device. In this paper, we describe three important areas that need consideration in order to stabilize and capitalize on the chemical processes that dominate a DMS separation. The first involves means of controlling the dynamic equilibrium of the clustering reactions with high concentrations of specific reagents. The second area involves a means to deal with the unwanted heterogeneous cluster ion populations emitted from the electrospray ionization process that degrade resolution and sensitivity. The third involves fine control of parameters that affect the fundamental collision processes, temperature and pressure.


Review of Scientific Instruments | 2010

Selection and generation of waveforms for differential mobility spectrometry

Evgeny V. Krylov; Stephen L. Coy; John Vandermey; Bradley B. Schneider; Thomas R. Covey; Erkinjon G. Nazarov

Devices based on differential mobility spectrometry (DMS) are used in a number of ways, including applications as ion prefilters for API-MS systems, as detectors or selectors in hybrid instruments (GC-DMS, DMS-IMS), and in standalone systems for chemical detection and identification. DMS ion separation is based on the relative difference between high field and low field ion mobility known as the alpha dependence, and requires the application of an intense asymmetric electric field known as the DMS separation field, typically in the megahertz frequency range. DMS performance depends on the waveform and on the magnitude of this separation field. In this paper, we analyze the relationship between separation waveform and DMS resolution and consider feasible separation field generators. We examine ideal and practical DMS separation field waveforms and discuss separation field generator circuit types and their implementations. To facilitate optimization of the generator designs, we present a set of relations that connect ion alpha dependence to DMS separation fields. Using these relationships we evaluate the DMS separation power of common generator types as a function of their waveform parameters. Optimal waveforms for the major types of DMS separation generators are determined for ions with various alpha dependences. These calculations are validated by comparison with experimental data.


Mass Spectrometry Reviews | 2016

Differential mobility spectrometry/mass spectrometry history, theory, design optimization, simulations, and applications

Bradley B. Schneider; Erkinjon G. Nazarov; Frank Londry; Paul Vouros; Thomas R. Covey

This review of differential mobility spectrometry focuses primarily on mass spectrometry coupling, starting with the history of the development of this technique in the Soviet Union. Fundamental principles of the separation process are covered, in addition to efforts related to design optimization and advancements in computer simulations. The flexibility of differential mobility spectrometry design features is explored in detail, particularly with regards to separation capability, speed, and ion transmission. 2015 Wiley Periodicals, Inc. Mass Spec Rev 35:687-737, 2016.


Journal of the American Society for Mass Spectrometry | 1993

Application of electrospray mass spectrometry in probing protein-protein and protein-ligand noncovalent interactions.

Eric Huang; Birendra N. Pramanik; Anthony Tsarbopoulos; Paul Reichert; Ashit K. Ganguly; Paul P. Trotta; Tattanahalli L. Nagabhushan; Thomas R. Covey

A novel mass spectrometry-based methodology using electrospray ionization (ESI) is described for the detection of protein-protein [interferon (IFN)-γ dimer] and protein-ligand [ras-guanosine diphosphate (GDP)] noncovalent interactions. The method utilizes ESI from aqueous solution at appropriate pH. The presence of the noncovalent complex of the IFN-γ dimer was confirmed by the observed average molecular weight of 33,819 Da. The key to the detection of the IFN-γ dimer is the use of an alkaline solution (pH ≈ 9) for sample preparation and for mass spectrornetry analysis. The effect of the declustering energy in the region of the ion sampling orifice and focusing quadrupole on the preservation of the gas-phase noncovalent complex (IFN-γ dimer) was also studied. The effect of the declustering energy on complex dissociation was further extended to probe the noncovalent protein-ligand association of ras-GDP. It was found that little energy is required to dissociate the IFN-γ dimer, whereas a substantial amount of energy is required to dissociate the gas-phase ras-GDP complex.


Archive | 1991

LC/MS and LC/MS/MS Screening for the Sites of Post-Translational Modification in Proteins

Thomas R. Covey; Bori Shushan; Ron Bonner; Werner Schröder; Ferdinand Hucho

Coupled high performance liquid chromatography/mass spectrometry (LC/MS) is utilized for the molecular weight determination of peptides from enzymatic digests of proteins. Methods designed to identify the individual peptides that contain sites of phosphorylation are described and demonstrated for the Lys C digest of the nicotinic acetylcholine receptor (AChR). The technique employs both the use of LC/MS and coupled LC/tandem mass spectrometry (LC/MS/MS) to screen for the neutral loss of phosphate from the peptides. The coupling of HPLC and mass spectrometry is accomplished through the use of an atmospheric pressure ionization source (API) and IonSpra® LC/MS interface on a triple quadrupole mass spectrometer.


Journal of the American Society for Mass Spectrometry | 2003

Particle discriminator interface for nanoflow ESI-MS

Bradley B. Schneider; Vladimir Baranov; Hassan Javaheri; Thomas R. Covey

An atmosphere to vacuum interface was designed to exploit the different mobility and momentum characteristics of ions, and charged and neutral particles in electrospray ionization-mass spectrometry. The purpose of this device is to transmit with high efficiency the ions created at atmospheric pressure into the mass analyzer and to deflect the large charged and neutral particles prior to entrance into the vacuum system, thereby maintaining system cleanliness and stability. This interface is particularly suitable for low flow rate electrospray ionization-mass spectrometry where the close proximity of the electrospray emitters to the vacuum entrance, and near total consumption of the entire spray, leads to the production of large quantities of non-desolvated droplets and large charged and neutral particles. The improvement involves the application of potential gradients to a particle discriminator space located between the gas restricting ion entrance orifice of the mass spectrometer and the exit of a heated laminar flow chamber to divert large particles from the gas conductance limiting orifice. A counter-current flow of drying gas is used to deflect neutral particles and solvent vapor. Two stages of desolvation are achieved with the combined effects of the curtain gas and heated laminar flow chamber. This enhances the efficiency of desolvation and ion production, and stabilizes the resulting ion current under a wide variety of solvent compositions. In addition, this system eliminates the problems associated with the boiling of solution in nanospray tips when operated in close proximity to a heated mass spectrometer inlet. The particle discriminator interface gives approximately a 2-fold improvement in ion count rates, and a 3-fold improvement in stability (as measured by the signal relative standard deviation).

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Chang Liu

University of British Columbia

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