Thomas Troxler

Oxygen Microscopy by Two‐Photon‐Excited Phosphorescence

High-resolution images of oxygen distributions in microheterogeneous samples are obtained by two-photon laser scanning microscopy (2P LSM), using a newly developed dendritic nanoprobe with internally enhanced two-photon absorption (2PA) cross-section. In this probe, energy is harvested by a 2PA antenna, which passes excitation onto a phosphorescent metalloporphyrin via intramolecular energy transfer. The 2P LSM allows sectioning of oxygen gradients with near diffraction-limited resolution, and lifetime-based acquisition eliminates dependence on the local probe concentration. The technique is validated on objects with a priori known oxygen distributions and applied to imaging of pO(2) in cells.

Light‐Induced Temperature Transitions in Biodegradable Polymer and Nanorod Composites

Shape-memory materials (including polymers, metals, and ceramics) are those that are processed into a temporary shape and respond to some external stimuli (e.g., temperature) to undergo a transition back to a permanent shape.[1, 2] Shape memory polymers are finding use in a range of applications from aerospace to fabrics, to biomedical devices and microsystem components.[3–5] For many applications, it would be beneficial to initiate heating with an external trigger (e.g., transdermal light exposure). In this work, we formulated composites of gold nanorods (<1% by volume) and biodegradable networks, where exposure to infrared light induced heating and consequently, shape transitions. The heating is repeatable and tunable based on nanorod concentration and light intensity and the nanorods did not alter the cytotoxicity or in vivo tissue response to the networks.

Electronic spectra of naphthalene⋅Arn solvent clusters (n=1–30)

Van der Waals (vdW) clusters of naphthalene with argon were synthesized in supersonic beam expansions. Mass‐selective absorption spectroscopy was carried out by using fragmentation‐free two‐color resonant two‐photon ionization with mass‐spectrometric detection. Electronic spectra of naph⋅Arn (n≤6) were recorded at the vicinity of the naphthalene S1←S0 electronic origin (32 020 cm−1 ), and corresponding spectra for the 810 transition up to n=30. For n=3, the spectra due to two different isomers could be separated. Clear evidence for the existence of different cluster isomers was also found for n=6, 8, 9, 12–14, and 25–28. In comparison with most other solvent clusters M⋅Arn (M is the aromatic molecule), the spectral red shifts of 000 and vibronic bands of the naph⋅Arn clusters are very small. Analysis of the size dependence of the electronic spectral shifts indicates that the stepwise solvation of the naphthalene molecule proceeds predominantly on one side of the molecule. Two semicyclic trends in the spe...

Substituent Effects on Xenon Binding Affinity and Solution Behavior of Water-Soluble Cryptophanes

A water-soluble triacetic acid cryptophane-A derivative (TAAC) was synthesized and determined by isothermal titration calorimetry and fluorescence quenching assay to have a xenon association constant of 33,000 M(-1) at 293 K, which is the largest value measured for any host molecule to date. Fluorescence lifetime measurements of TAAC in the presence of varying amounts of xenon indicated static quenching by the encapsulated xenon and the presence of a second non-xenon-binding conformer in solution. Acid-base titrations and aqueous NMR spectroscopy of TAAC and a previously synthesized tris(triazole propionic acid) cryptophane-A derivative (TTPC) showed how solvation of the carboxylate anions can affect the aqueous behavior of the large, nonpolar cryptophane. Specifically, whereas only the crown-crown conformer of TTPC was observed, a crown-saddle conformer of TAAC was also assigned in aqueous solution.

Snapshot of the equilibrium dynamics of a drug bound to HIV-1 reverse transcriptase

The anti-AIDS drug rilpivirine undergoes conformational changes to bind HIV-1 reverse transcriptase and retain potency against drug-resistance mutations. Our discovery that water molecules play an essential role in the drug binding is reported. Femtosecond experiments and theory expose molecular level dynamics of rilpivirine bound to HIV-1 reverse transcriptase. The two nitrile substituents (-CN), one on each arm of the drug, have vibrational spectra consistent with their protein environments being similar in crystals and in solutions. Two-dimensional vibrational-echo spectroscopy reveals a dry environment for one nitrile while unexpectedly the other is hydrogen-bonded to a mobile water molecule, not identified in earlier X-ray structures. Ultrafast nitrile-water dynamics are confirmed by simulations. A higher (1.51 Å) resolution X-ray structure indeed reveals a water-drug interaction network. Maintenance of a crucial anchoring hydrogen bond, despite the enlargement and structural variation of the binding pocket, may help retain the potency of rilpivirine against the pocket mutations.

Design of Metalloporphyrin-Based Dendritic Nanoprobes for Two-Photon Microscopy of Oxygen

Metalloporphyrin-based phosphorescent nanoprobes are being developed for two-photon microscopy of oxygen. In these molecular constructs generation of porphyrin triplet states upon two-photon excitation is induced upon the intramolecular Förster-type resonance energy transfer from a covalently attached 2P antenna. In the earlier developed prototypes, electron transfer between the antenna and the metalloporphyrin strongly interfered with the phosphorescence, reducing the sensitivity and the dynamic range of the sensors. By tuning the distances between the antenna and the core and adjusting their redox potentials the unwanted electron transfer could be prevented. An array of phosphorescent Pt porphyrins (energy transfer acceptors) and 2P dyes (energy transfer donors) was screened using dynamic quenching of phosphorescence, and the FRET-pair with the minimal ET rate was identified. This pair, consisting of Coumarin-343 and Pt meso-tetra-(4-alkoxyphenyl)porphyrin, was used to construct a probe in which the antenna fragments were linked to the termini of G3 poly(arylglycine) (AG) dendrimer with PtP core. The folded dendrimer formed an insulating layer between the porphyrin and the antenna, simultaneously controlling the rate of oxygen quenching (Stern-Volmer oxygen quenching constant). Modification of the dendrimer periphery with oligoethyleneglycol residues made the probes signal insensitive to the presence of proteins and other macromolecular solutes.

Molecular dynamics and semiclassical electronic spectra of naphthalene⋅Arn clusters (n≤4)

Molecular dynamics simulations were performed for van der Waals clusters naphthalene⋅Arn, n=1 to 4. For all isomers and conformers of these clusters, dynamical quantities such as velocity autocorrelation functions, vibrational power spectra, and semiclassical electronic absorption spectra were calculated over a wide energy range, and averaged over a canonical distribution at temperatures in the range T=5 to 30 K. Electronic absorption spectra were calculated for the origin bands according to the semiclassical method [L. E. Fried and S. Mukamel, J. Chem. Phys. 96, 116 (1992)] and are compared with the corresponding experimental naphthalene⋅Arn R2PI spectra [T. Troxler and S. Leutwyler, J. Chem. Phys. 95, 4010 (1991)]. The appearance of distinct absorption bands due to specific isomers for a given cluster size, as observed experimentally, is well reproduced by the simulations. Comparison of calculated electronic shifts for different isomers allows clear assignments in the experimental spectra. Increasing th...

Melittin as model system for probing interactions between proteins and cyclodextrins

Cylcodextrin sugars are cyclic sugars that have a hydrophilic exterior and a hydrophobic center. This enables cyclodextrins to solubilize hydrophobic molecules in aqueous media. Cyclodextrins may inhibit aggregation by intercalating surface aromatic residues and competing with interprotein aromatic clusters (π–π interactions). In order to investigate this concept, the interaction of hydroxypropyl‐β‐cyclodextrin (HPBCD) with melittin is studied with steady‐state and time‐resolved fluorescence, fluorescence polarization, circular dichroism, and IR spectroscopy. HPBCD inhibits the aggregation of melittin. This inhibition and the spectroscopic results are consistent with the lone aromatic tryptophan of the peptide being intercalated within HPBCD. Proteins 2004.

Structural measurements of hydrogen‐bonded van der Waals dimers and trimers by rotational coherence spectroscopy: 2,5‐diphenyloxadiazole with argon, methane, water, and alcohols

Picosecond time‐resolved polarized fluorescence experiments involving time‐correlated single‐photon counting have studied rotational coherence phenomena of hydrogen‐bonded and other molecular aggregates in their lowest excited singlet states. The experiments are supported by detailed simulations. Using the molecule 2,5‐diphenyl‐1,3,4‐oxadiazole (PPD) as a host species, experiments have compared van der Waals aggregates with Ar1,2, (CH4)1,2, (H2O)1,2, (CH3OH)1,2, (C2H5OH)1, and (1‐C3H7OH)1. Bare PPD, and the argon and methane aggregates all exhibit prominent J‐type recurrences. The resulting sums of rotational constants (B+C) are consistent with center‐of‐mass‐bound, three‐dimensional structures, having out‐of‐plane distances for the attached species of 3.3–3.5 A. The 1:2 aggregates involving argon and methane exhibit additive spectral shifts and nearly additive rotational recurrence times. This shows that the sites for addition of consecutive species are equivalent.Calculations of rotational constants con...

Utility of 5-Cyanotryptophan Fluorescence as a Sensitive Probe of Protein Hydration

Tryptophan (Trp) fluorescence has been widely used to interrogate the structure, dynamics, and function of proteins. In particular, it provides a convenient and site-specific means to probe a proteins hydration status and dynamics. Herein, we show that a tryptophan analogue, 5-cyanotryptophan (TrpCN), can also be used for this purpose, but with the benefit of enhanced sensitivity to hydration. This conclusion is reached based on measurements of the static and time-resolved fluorescence properties of 5-cyanoindole, TrpCN, and TrpCN-containing peptides in different solvents, which indicate that upon dehydration the fluorescence quantum yield (QY) and lifetime (τF) of TrpCN undergo a much greater change in comparison to those of Trp. For example, in H2O the QY of TrpCN is less than 0.01, which increases to 0.11 in 1,4-dioxane. Consistently, the fluorescence decay kinetics of TrpCN in H2O are dominated by a 0.4 ns component, whereas in 1,4-dioxane the kinetics are dominated by a 6.0 ns component. The versatile utility of TrpCN as a sensitive fluorescence reporter is further demonstrated in three applications, where we used it (1) to probe the solvent property of a binary mixture consisting of dimethyl sulfoxide and H2O, (2) to monitor the binding interaction of an antimicrobial peptide with lipid membranes, and (3) to differentiate two differently hydrated environments in a folded protein.