Tianyu Hu

Mapping Global Forest Aboveground Biomass with Spaceborne LiDAR, Optical Imagery, and Forest Inventory Data

As a large carbon pool, global forest ecosystems are a critical component of the global carbon cycle. Accurate estimations of global forest aboveground biomass (AGB) can improve the understanding of global carbon dynamics and help to quantify anthropogenic carbon emissions. Light detection and ranging (LiDAR) techniques have been proven that can accurately capture both horizontal and vertical forest structures and increase the accuracy of forest AGB estimation. In this study, we mapped the global forest AGB density at a 1-km resolution through the integration of ground inventory data, optical imagery, Geoscience Laser Altimeter System/Ice, Cloud, and Land Elevation Satellite data, climate surfaces, and topographic data. Over 4000 ground inventory records were collected from published literatures to train the forest AGB estimation model and validate the resulting global forest AGB product. Our wall-to-wall global forest AGB map showed that the global forest AGB density was 210.09 Mg/ha on average, with a standard deviation of 109.31 Mg/ha. At the continental level, Africa (333.34 ± 63.80 Mg/ha) and South America (301.68 ± 67.43 Mg/ha) had higher AGB density. The AGB density in Asia, North America and Europe were 172.28 ± 94.75, 166.48 ± 84.97, and 132.97 ± 50.70 Mg/ha, respectively. The wall-to-wall forest AGB map was evaluated at plot level using independent plot measurements. The adjusted coefficient of determination (R2) and root-mean-square error (RMSE) between our predicted results and the validation plots were 0.56 and 87.53 Mg/ha, respectively. At the ecological zone level, the R2 and RMSE between our map and Intergovernmental Panel on Climate Change suggested values were 0.56 and 101.21 Mg/ha, respectively. Moreover, a comprehensive comparison was also conducted between our forest AGB map and other published regional AGB products. Overall, our forest AGB map showed good agreements with these regional AGB products, but some of the regional AGB products tended to underestimate forest AGB density.

Forest fuel treatment detection using multi-temporal airborne lidar data and high-resolution aerial imagery: a case study in the Sierra Nevada Mountains, California

ABSTRACT Treatments to reduce forest fuels are often performed in forests to enhance forest health, regulate stand density, and reduce the risk of wildfires. Although commonly employed, there are concerns that these forest fuel treatments (FTs) may have negative impacts on certain wildlife species. Often FTs are planned across large landscapes, but the actual treatment extents can differ from the planned extents due to operational constraints and protection of resources (e.g. perennial streams, cultural resources, wildlife habitats). Identifying the actual extent of the treated areas is of primary importance to understand the environmental influence of FTs. Light detection and ranging (lidar) is a powerful remote-sensing tool that can provide accurate measurements of forest structures and has great potential for monitoring forest changes. This study used the canopy height model (CHM) and canopy cover (CC) products derived from multi-temporal airborne laser scanning (ALS) data to monitor forest changes following the implementation of landscape-scale FT projects. Our approach involved the combination of a pixel-wise thresholding method and an object-of-interest (OBI) segmentation method. We also investigated forest change using normalized difference vegetation index (NDVI) and standardized principal component analysis from multi-temporal high-resolution aerial imagery. The same FT detection routine was then applied to compare the capability of ALS data and aerial imagery for FT detection. Our results demonstrate that the FT detection using ALS-derived CC products produced both the highest total accuracy (93.5%) and kappa coefficient (κ) (0.70), and was more robust in identifying areas with light FTs. The accuracy using ALS-derived CHM products (the total accuracy was 91.6%, and the κ was 0.59) was significantly lower than that using ALS-derived CC, but was still higher than using aerial imagery. Moreover, we also developed and tested a method to recognize the intensity of FTs directly from pre- and post-treatment ALS point clouds.

An integrated UAV-borne lidar system for 3D habitat mapping in three forest ecosystems across China

ABSTRACT In recent decades, global biodiversity has gradually diminished due to the increasing pressure from anthropogenic activities and climatic change. Accurate estimations of spatially continuous three-dimensional (3D) vegetation structures and terrain information are prerequisites for biodiversity studies, which are usually unavailable in current ecosystem-wide studies. Although the airborne lidar technique has been successfully used for mapping 3D vegetation structures at landscape and regional scales, the relatively high cost of airborne lidar flight mission has significantly limited its applications. The unmanned aerial vehicle (UAV) provides an alternative platform for lidar data acquisition, which can largely lower the cost and provide denser lidar points compared with airborne lidar. In this study, we implemented a low-cost UAV-borne lidar system, including both a hardware system and a software system, to collect and process lidar data for biodiversity studies. The implemented UAV-borne lidar system was tested in three different ecosystems across China, including a needleleaf–broadleaf mixed forest, an evergreen broadleaf forest, and a mangrove forest. Various 3D vegetation structure parameters (e.g. canopy height model, canopy cover, leaf area index, aboveground biomass) were derived from the UAV-borne lidar data. The results show that the implemented UAV-borne lidar system can generate very high resolution 3D terrain and vegetation information. The developed UAV-based hardware and software systems provide a turn-key solution for the use of UAV-borne lidar data on biodiversity studies.

Global patterns of woody residence time and its influence on model simulation of aboveground biomass

Woody residence time (τw) is an important parameter that expresses the balance between mature forest recruitment/growth and mortality. Using field data collected from the literature, this study explored the global forest τw and investigated its influence on model simulations of aboveground biomass (AGB) at a global scale. Specifically, τw was found to be related to forest age, annual temperature, and precipitation at a global scale, but its determinants were different among various plant function types. The estimated global forest τw based on the filed data showed large spatial heterogeneity, which plays an important role in model simulation of AGB by a dynamic global vegetation model (DGVM). The τw could change the resulting AGB in tenfold based on a site-level test using the Monte Carlo method. At the global level, different parameterization schemes of the Integrated Biosphere Simulator using the estimated τw resulted in a twofold change in the AGB simulation for 2100. Our results highlight the influences of various biotic and abiotic variables on forest τw. The estimation of τw in our study may help improve the model simulations and reduce the parameters uncertainty over the projection of future AGB in the current DGVM or Earth System Models. A clearer understanding of the responses of τw to climate change and the corresponding sophisticated description of forest growth/mortality in model structure is also needed for the improvement of carbon stock prediction in future studies.

Deep Learning: Individual Maize Segmentation From Terrestrial Lidar Data Using Faster R-CNN and Regional Growth Algorithms

The rapid development of light detection and ranging (Lidar) provides a promising way to obtain three-dimensional (3D) phenotype traits with its high ability of recording accurate 3D laser points. Recently, Lidar has been widely used to obtain phenotype data in the greenhouse and field with along other sensors. Individual maize segmentation is the prerequisite for high throughput phenotype data extraction at individual crop or leaf level, which is still a huge challenge. Deep learning, a state-of-the-art machine learning method, has shown high performance in object detection, classification, and segmentation. In this study, we proposed a method to combine deep leaning and regional growth algorithms to segment individual maize from terrestrial Lidar data. The scanned 3D points of the training site were sliced row and row with a fixed 3D window. Points within the window were compressed into deep images, which were used to train the Faster R-CNN (region-based convolutional neural network) model to learn the ability of detecting maize stem. Three sites of different planting densities were used to test the method. Each site was also sliced into many 3D windows, and the testing deep images were generated. The detected stem in the testing images can be mapped into 3D points, which were used as seed points for the regional growth algorithm to grow individual maize from bottom to up. The results showed that the method combing deep leaning and regional growth algorithms was promising in individual maize segmentation, and the values of r, p, and F of the three testing sites with different planting density were all over 0.9. Moreover, the height of the truly segmented maize was highly correlated to the manually measured height (R2> 0.9). This work shows the possibility of using deep leaning to solve the individual maize segmentation problem from Lidar data.