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Dive into the research topics where Timothy W. Bredy is active.

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Featured researches published by Timothy W. Bredy.


Annals of the New York Academy of Sciences | 2006

Epigenetic Programming of Stress Responses through Variations in Maternal Care

Eric W. Fish; Dara Shahrokh; Rose Bagot; Christian Caldji; Timothy W. Bredy; Moshe Szyf; Michael J. Meaney

Abstract: Early life experiences shape an individuals physical and mental health across the lifespan. Not surprisingly, an upbringing that is associated with adversity can produce detrimental effects on health. A central theme that arises from studies in human and nonhuman species is that the effects of adversity are mediated by the interactions between a mother and her young. In this review we describe some of the long‐term effects of maternal care on the offspring and we focus on the impact of naturally occurring variations in the behavior of female rats. Of particular interest are mothers that engage in high or low amounts of licking/grooming (LG) and arched‐back nursing (ABN) of their pups, but do so within the normal range for this species. Such variations in LG‐ABN can alter the function of the hypothalamic‐pituitary‐adrenal (HPA) axis, and cognitive and emotional development by directly affecting the underlying neural mechanisms. At the heart of these mechanisms is gene expression. By studying the hippocampal glucocorticoid receptor gene, we have identified that maternal care regulates its expression by changing two processes: the acetylation of histones H3‐K9, and the methylation of the NGFI‐A consensus sequence on the exon 17 promoter. Sustained “maternal effects” appear elsewhere in biology, including plants, insects, and lizards, and may have evolved to program advantages in the environments that the offspring will likely face as adults. Given the importance of early life and parent‐child interactions to later behavior, prevention and intervention programs should target this critical phase of development.


Neuroscience | 2003

Partial reversal of the effect of maternal care on cognitive function through environmental enrichment

Timothy W. Bredy; R.A Humpartzoomian; Donald P. Cain; Michael J. Meaney

Maternal care influences hippocampal development in the rat. The offspring of mothers that exhibit increased levels of pup licking/grooming and arched-back nursing (High LG-ABN mothers) show increased hippocampal N-methyl-D-aspartate (NMDA) receptor binding and enhanced hippocampal-dependent spatial learning. In these studies we examined whether environmental enrichment from days 22-70 of life might reverse the effects of low maternal care. Environmental enrichment eliminated the differences between the offspring of High and Low LG-ABN mothers in both Morris water maze learning and object recognition. However, enrichment did not reverse the effect of maternal care on long-term potentiation in the dentate gyrus or on hippocampal NMDA receptor binding. In contrast, peripubertal enrichment did reverse the effects of maternal care on hippocampal alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor binding. These findings provide evidence for the reversal of the effects of reduced maternal investment in early life on cognitive function in adulthood. Such effects might involve compensatory changes associated with peripubertal enrichment.


Learning & Memory | 2008

The histone deacetylase inhibitor valproic acid enhances acquisition, extinction, and reconsolidation of conditioned fear

Timothy W. Bredy; Mark Barad

Histone modifications contribute to the epigenetic regulation of gene expression, a process now recognized to be important for the consolidation of long-term memory. Valproic acid (VPA), used for many years as an anticonvulsant and a mood stabilizer, has effects on learning and memory and enhances the extinction of conditioned fear through its function as a histone deacetylase inhibitor (HDAC). Here we report that VPA enhances long-term memory for both acquisition and extinction of cued-fear. Interestingly, VPA enhances extinction, but also enhances renewal of the original conditioned fear when tested in a within-subjects design. This effect appears to be related to a reconsolidation-like process since a single CS reminder in the presence of VPA can enhance long-term memory for the original fear in the context in which fear conditioning takes place. We also show that by modifying the intertrial interval during extinction training, VPA can strengthen reconsolidation of the original fear memory or enhance long-term memory for extinction such that it becomes independent of context. These findings have important implications for the use of HDAC inhibitors as adjuncts to behavior therapy in the treatment of phobia and related anxiety disorders.


European Journal of Neuroscience | 2003

Maternal care influences neuronal survival in the hippocampus of the rat

Timothy W. Bredy; Rebecca J. Grant; Danielle L. Champagne; Michael J. Meaney

Maternal care during the first week of postnatal life influences hippocampal development and function (Liu et al., 2000; Nature Neurosci., 3, 799–806). Offspring reared by mothers who exhibit increased levels of pup licking/grooming (LG) show increased hippocampal synaptic density and enhanced spatial learning and memory. Using 5‐bromo‐2′‐deoxyuridine (BrdU), a thymidine analogue incorporated into cells during DNA synthesis, we examined the effects of early maternal care on hippocampal cell proliferation and neuronal survival in the rat. Twenty‐four hours following injection on day 7 of life (P7) there were no differences in BrdU labelling in the offspring of high‐ compared with low‐LG mothers, suggesting no maternal effect on the rate of proliferation at this age. However, 14 and 83 days following injection (P21 and P90), the offspring of high‐LG mothers had significantly more surviving BrdU‐labelled cells and BrdU–NeuN+‐colabelled neurons in the dentate gyrus subgranular zone and granule cell layer. At P21, the offspring of high‐LG mothers showed increased protein expression of basic fibroblast growth factor and significantly decreased levels of pyknosis. These findings suggest an influence of maternal care on neuronal survival in the hippocampus. Conversely, at the same time point there was a significantly higher level of hippocampal glial fibrillary acidic protein expression in the offspring of low‐LG mothers. These findings emphasize the importance of early maternal care for hippocampal development.


Molecular Psychiatry | 2014

The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing

Guy Barry; James Briggs; Darya Vanichkina; E. M. Poth; Natalie J. Beveridge; Vikram S. Ratnu; Sam P. Nayler; Katia Nones; Jianfei Hu; Timothy W. Bredy; Shinichi Nakagawa; Frank Rigo; Ryan J. Taft; Murray J. Cairns; Seth Blackshaw; Ernst J. Wolvetang; John S. Mattick

Schizophrenia (SZ) is a complex disease characterized by impaired neuronal functioning. Although defective alternative splicing has been linked to SZ, the molecular mechanisms responsible are unknown. Additionally, there is limited understanding of the early transcriptomic responses to neuronal activation. Here, we profile these transcriptomic responses and show that long non-coding RNAs (lncRNAs) are dynamically regulated by neuronal activation, including acute downregulation of the lncRNA Gomafu, previously implicated in brain and retinal development. Moreover, we demonstrate that Gomafu binds directly to the splicing factors QKI and SRSF1 (serine/arginine-rich splicing factor 1) and dysregulation of Gomafu leads to alternative splicing patterns that resemble those observed in SZ for the archetypal SZ-associated genes DISC1 and ERBB4. Finally, we show that Gomafu is downregulated in post-mortem cortical gray matter from the superior temporal gyrus in SZ. These results functionally link activity-regulated lncRNAs and alternative splicing in neuronal function and suggest that their dysregulation may contribute to neurological disorders.


European Journal of Neuroscience | 2004

Peripubertal environmental enrichment reverses the effects of maternal care on hippocampal development and glutamate receptor subunit expression

Timothy W. Bredy; Tie-Yuan Zhang; Rebecca J. Grant; Josie Diorio; Michael J. Meaney

Maternal care in the rat influences the development of cognitive function in the offspring through neural systems known to mediate activity‐dependent synaptic plasticity. The offspring of mothers that exhibit increased levels of pup licking/grooming (high‐LG mothers) show increased hippocampal N‐methyl‐d‐aspartate (NMDA) subunit mRNA expression, enhanced synaptogenesis and improved hippocampal‐dependent spatial learning in comparison with animals reared by low‐LG mothers. The effects of reduced maternal care on cognitive function are reversed with peripubertal environmental enrichment; however, the neural mechanisms mediating this effect are not known. In these studies we exposed the offspring of high‐ and low‐LG mothers to environmental enrichment from days 22 to 70 of life, and measured the expression of genes encoding for glutamate receptor subunits and synaptophysin expression as a measure of synaptic density. Environmental enrichment reversed the effects of maternal care on synaptic density and this effect was, in turn, associated with a reversal of the effect of maternal care on the NR2A and NR2B subunits of the NMDA receptor, as well as effects on (RS)‐α‐amino‐3‐hydroxy‐5‐methyl‐4‐isoxazolepropionic acid (AMPA) receptor subunits. Finally, direct infusion of an NR2B‐specific NMDA receptor antagonist into the hippocampus eliminated the effects of maternal care on spatial learning/memory in the Morris water maze. These findings suggest that: (1) the effects of maternal care are mediated by changes in NR2B gene expression; and (2) that environmental enrichment reverses the effects of reduced maternal care through the same genomic target, the NR2B gene, and possibly effects on other subunits of the NMDA and AMPA receptors.


The Journal of Physiology | 2013

The amygdala and medial prefrontal cortex: partners in the fear circuit

Roger Marek; Cornelia Strobel; Timothy W. Bredy; Pankaj Sah

Abstract  Fear conditioning and fear extinction are Pavlovian conditioning paradigms extensively used to study the mechanisms that underlie learning and memory formation. The neural circuits that mediate this learning are evolutionarily conserved, and seen in virtually all species from flies to humans. In mammals, the amygdala and medial prefrontal cortex are two structures that play a key role in the acquisition, consolidation and retrieval of fear memory, as well extinction of fear. These two regions have extensive bidirectional connections, and in recent years, the neural circuits that mediate fear learning and fear extinction are beginning to be elucidated. In this review, we provide an overview of our current understanding of the neural architecture within the amygdala and medial prefrontal cortex. We describe how sensory information is processed in these two structures and the neural circuits between them thought to mediate different aspects of fear learning. Finally, we discuss how changes in circuits within these structures may mediate fear responses following fear conditioning and extinction.


Nature Neuroscience | 2011

The brain-specific microRNA miR-128b regulates the formation of fear-extinction memory

Quan Lin; Wei Wei; Carlos M. Coelho; Xiang Li; Dannay Baker-Andresen; Kevin J. Dudley; Vikram S. Ratnu; Zoran Boskovic; Michael S. Kobor; Yi E. Sun; Timothy W. Bredy

MicroRNAs are small non-coding RNAs that mediate post-transcriptional gene silencing. Fear-extinction learning in C57/Bl6J mice led to increased expression of the brain-specific microRNA miR-128b, which disrupted stability of several plasticity-related target genes and regulated formation of fear-extinction memory. Increased miR-128b activity may therefore facilitate the transition from retrieval of the original fear memory toward the formation of a new fear-extinction memory.


Trends in Neurosciences | 2013

Dynamic DNA methylation: a prime candidate for genomic metaplasticity and behavioral adaptation.

Danay Baker-Andresen; Vikram S. Ratnu; Timothy W. Bredy

DNA methylation was once considered to be a static epigenetic modification whose primary function was restricted to directing the development of cellular phenotype. However, it is now evident that the methylome is dynamically regulated across the lifespan: during development as a putative mechanism by which early experience leaves a lasting signature on the genome and during adulthood as a function of behavioral adaptation. Here, we propose that experience-dependent variations in DNA methylation, particularly within the context of learning and memory, represent a form of genomic metaplasticity that serves to prime the transcriptional response to later learning-related stimuli and neuronal reactivation.


Proceedings of the National Academy of Sciences of the United States of America | 2014

Neocortical Tet3-mediated accumulation of 5-hydroxymethylcytosine promotes rapid behavioral adaptation

Xiang Li; Wei Wei; Qiong-Yi Zhao; Jocelyn Widagdo; Danay Baker-Andresen; Charlotte R. Flavell; Ana D'Alessio; Yi Zhang; Timothy W. Bredy

Significance We have discovered a critical role for ten-eleven translocation 3-mediated hydroxylation of 5-methycytosine in the adult prefrontal cortex in mediating rapid behavioral adaptation. 5-hydroxymethylcytosine (5-hmC) is highly dynamic in response to fear extinction training, and rather than simply reflecting a functional intermediary of active DNA demethylation, the learning-induced intergenic accumulation of 5-hmC creates an epigenetic state that promotes experience-dependent gene expression and behavioral adaptation. 5-hydroxymethylcytosine (5-hmC) is a novel DNA modification that is highly enriched in the adult brain and dynamically regulated by neural activity. 5-hmC accumulates across the lifespan; however, the functional relevance of this change in 5-hmC and whether it is necessary for behavioral adaptation have not been fully elucidated. Moreover, although the ten-eleven translocation (Tet) family of enzymes is known to be essential for converting methylated DNA to 5-hmC, the role of individual Tet proteins in the adult cortex remains unclear. Using 5-hmC capture together with high-throughput DNA sequencing on individual mice, we show that fear extinction, an important form of reversal learning, leads to a dramatic genome-wide redistribution of 5-hmC within the infralimbic prefrontal cortex. Moreover, extinction learning-induced Tet3-mediated accumulation of 5-hmC is associated with the establishment of epigenetic states that promote gene expression and rapid behavioral adaptation.

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Xiang Li

University of Queensland

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Wei Wei

University of Queensland

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Paul Marshall

University of California

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Qiong-Yi Zhao

University of Queensland

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Laura Leighton

Allen Institute for Brain Science

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Luis Eduardo Wearick-Silva

Pontifícia Universidade Católica do Rio Grande do Sul

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