Tiziano Caruso

Morphological characteristics, microsatellite fingerprinting and determination of incompatibility genotypes of Sicilian sweet cherry cultivars

Summary Sicily has extensive germplasm of diploid sweet cherry (Prunus avium L.) that has not been well studied. In this investigation, 39 cherry accessions, selected from collections and farms, were analysed using molecular markers and characterised for various morphological and other agronomic characters such as flesh colour, fruit size, quality and, in some cases, ripening periods. Thirteen Simple Sequence Repeat (SSR) primer pairs, as well as two primer pairs for the incompatibility (S) locus, which amplified across the first intron of the S-RNase gene and across the intron of the SFB gene, were used in three multiplexed reactions to analyse the accessions. The number of alleles per SSR locus ranged from four to 11 (mean 7.2). Twelve S-alleles were found. Allele S4, which has been reported to be common in sweet cherry, was absent from the Sicilian germplasm and alleles S16 and S22 were frequent, although previously reported largely in wild populations. The accessions were assigned to their incompatibility groups. A UPGMA dendrogram was constructed and revealed possible synonyms. The set of SSR primers amplified unique fingerprints for 27 accessions, while twelve fell into six non-distinguishable groups. This approach could be used for comparing cultivars and wild accessions from other regions, and for establishing a database of this important species for breeding and conservation purposes. Several accessions useful for breeding are reported.

Genetic relationships, structure and parentage simulation among the olive tree (Olea europaea L. subsp. europaea) cultivated in Southern Italy revealed by SSR markers

In this work, we assess both the morphological and genetic diversity of 68 important olive cultivars from three Southern Italian regions: Calabria, Campania and Sicily. Twenty-five phenotypic traits were evaluated and 12 simple sequence repeat (SSR) markers were analysed. All SSR primers were polymorphic and reliable. The total number of alleles per locus varied from 5 to 19 with an average number of 13.1 and a mean polymorphic information content (PIC) of 0.81. These results suggested high genetic diversity within these three olive germplasm collections. Morphological traits also showed significant variability amongst cultivars. Two cases of identity were found and ten statistically significant cases of putative parent/sibling were discovered by performing a SSR-based parentage simulation analysis with CERVUS. The Mantel test indicated low but significant correlations between the morphological data and SSR allelic frequency, origin and SSR allelic frequency, and origin and morphology. Structure software allowed inference of relationships between the three olive germplasm collections and allowed us to obtain the most consistent grouping and to identify putative admixed or exchanged cultivars. Cluster and multivariate analysis, based on morphological traits, revealed geographic grouping in agreement with UPGMA dendrogram and structure analysis using SSRs. Sicilian cultivars showed a more homogenous genetic makeup, probably due to geographical isolation, whilst Calabrian and Campanian cultivars seemed to have a less distinct genetic structure, with a greater degree of intermixing. A correlation between the presence of certain SSR alleles and fruit size was also found.

SSR-based DNA fingerprints reveal the genetic diversity of Sicilian olive (Olea europaea L.) germplasm

Summary Twelve published simple sequence repeat (SSR; microsatellite) markers, belonging to the ssrOeUA-DCA, GAPU and UDO series, were tested in a panel of 46 accessions of olive germplasm belonging to 30 unique cultivars collected in seven Provinces of Sicily. Four well-known reference olive cultivars were also added. The analysis was carried out on an automatic capillary sequencer using fluorescent dyes, and fragment sizes were determined using internal standards. The results allowed us to rank the SSRs assayed according to their information content and reproducibility. Up to 115 alleles were identified (119, if those unique to sport mutations were included), the frequency of which allowed genetic relationships among accessions to be investigated. The probability that two unrelated genotypes displayed the same SSR pattern at all loci examined was calculated to be as low as 1.18 10–11. Sixteen accessions were identified as synonyms. Of these, eight matched perfectly with another accession at all SSR loci examined. The others showed one or two allelic differences from the reference accession. These were interpreted as mutations. Otherwise, all accessions were clearly separated from each other. Two likely parentages were also identified (‘Giarfara’ = ‘Nocellara del Belice’ ‘Cacaridduni’; and ‘Pizzo di Corvo’ = ‘Nocellara Etnea’ ‘Tonda Iblea’). The genetic diversity of the pool represented by the unique accessions was very high, reflecting the richness of the olive germplasm accumulated in Sicily. A database of the accessions is available to the scientific community (http://www.unipa.it/germolive/ssr.html) to facilitate comparisons of data.

Productive and vegetative behavior of olive cultivars in super high-density olive grove

In recent years, there has been an increase in interest in super high-density (SHD) olive (Olea europaea L.) groves because they offer early entry into production, increased productivity and the possibility of using modified mechanical vine harvesters. This study was carried out in a young SHD olive grove to examine vegetative, histo-anatomical and productive characteristics and oil quality of the Spanish Arbequina and Italian Maurino and Leccino cultivars, characterized by low, low-to-medium and high vigor, respectively. Arbequina had low vigor and limited development in height and width, as well as a high leaf/wood ratio. Maurino had a canopy volume similar to that of Arbequina and, despite a great tendency to grow in height, had low vigor, a rather compact vegetative habitus, but good lighting in the canopy and high production efficiency. In Maurino, a greater palisade parenchyma height and a larger exposed lateral surface area of the palisade parenchyma cells were observed. In the fourth year after planting, fruit production of Arbequina was about 30 % less than Leccino and Maurino. The oil content on a dry weight basis was slightly higher in Arbequina and Maurino than in Leccino. Oil quality was good for all cultivars.

Olive agroforestry systems in Sicily: Cultivated typologies and secondary succession processes after abandonment

Abstract The first part of this study provides an overview on Sicilian olive systems. Subsequently, the study describes the different typologies of cultivated agroforestry systems present in South-Eastern Sicily employing olive trees in association with other Mediterranean tree species, in particular for the production of firewood, coal and animal food (downy or pubescent oak, holm oak, cork oak), but also in association with forage or grazing species (oat, barley, vetch, etc.) or cereals. The study shows that Sicilian agroforestry systems are much more diversified than it was known so far. In the second part, the study describes the spontaneous colonization processes by plants, observed in abandoned olive agroforestry systems and leading to the formation of more complex ecosystems (renaturation). Most of the previously described agroforestry systems are at present subject to abandonment. Our analysis of secondary succession dynamics shows how woody species, and above all those species which are part of the cultivated system, rapidly colonize abandoned areas, so that a maquis-wood is formed within few decades.

Dynamics of nitrogen uptake and partitioning in early and late fruit ripening peach (Prunus persica) tree genotypes under a mediterranean climate

The dynamics of N uptake and N partitioning in peach (Prunus persica, Batsch) trees of a very early (cv. Flordastar) and a very late (cv. Tudia) fruit ripening varieties grown under a mediterranean climate was assessed during one season. Labelled N was applied to two-year old potted trees which were destructively harvested at regular intervals during the vegetative and reproductive cycle. Tree phenology as well as vegetative and reproductive growth of the two genotypes strongly differed: bud burst started in late January in Flordastar and late March in Tudia. Leaf senescence in Flordastar was almost complete by mid October, while Tudia still retained a significant fraction of leaves at the December harvest. Fruit yield averaged 4.0 and 6.9 kg tree−1 (fresh weight) in cv. Flordastar and Tudia, respectively, and fruit size was within commercial standards for the two genotypes. After growth resumption, shoot and fruit growth mainly relied on N remobilised from reserves, which accounted for 72–80% of total N in new growth. Nitrogen uptake by both genotypes was relatively low in the first month after bud burst, then was more rapid until the end of the season. Total labelled N uptake did not differ between the two genotypes and accounted on average for 65–70% of total N supplied. The kinetics of labelled N uptake were similar in the two varieties despite the great difference in the timing of their fruit ripening. Leaves were the main sink for N during much of the experimental period. The fruits, when present, also used a significant fraction of the absorbed N, which was almost constant until fruit ripening in Flordastar. Nitrogen partitioning to leaves declined progressively after summer, when a greater fraction of the absorbed N was recovered in the twigs, the trunk, the fine roots and especially in the coarse roots. The data provide evidence for guiding the kinetics of N supply to peach orchards under a Mediterranean climate.

Toward the definition of a carbon budget model: seasonal variation and temperature effect on respiration rate of vegetative and reproductive organs of pistachio trees (Pistacia vera)

This study, as a preliminary step toward the definition of a carbon budget model for pistachio trees (Pistacia vera L.), aimed at estimating and evaluating the dynamics of respiration of vegetative and reproductive organs of pistachio tree. Trials were performed in 2005 in a commercial orchard located in Sicily (370 m a.s.l.) on five bearing 20-year-old pistachio trees of cv. Bianca grafted onto Pistachio terebinthus L. Growth analyses and respiration measurements were done on vegetative (leaf) and reproductive (infructescence) organs during the entire growing season (April-September) at biweekly intervals. Results suggested that the respiration rates of pistachio reproductive and vegetative organs were related to their developmental stage. Both for leaf and for infructescence, the highest values were observed during the earlier stages of growth corresponding to the phases of most intense organ growth. The sensitivity of respiration activity to temperature changes, measured by Q(10), showed an increase throughout the transition from immature to mature leaves, as well as during fruit development. The data collected were also used to estimate the seasonal carbon loss by respiration activity for a single leaf and a single infructescence. The amount of carbon lost by respiration was affected by short-term temperature patterns, organ developmental stage and tissue function.

Effect of the mechanical harvest of drupes on the quality characteristics of green fermented table olives.

BACKGROUND Because of damage caused by mechanical harvesting, the drupes for table olive production are traditionally hand harvested. Until now, no data have been available on the microbiological and chemical features of mechanically harvested drupes during fermentation. RESULTS Drupes mechanically harvested and inoculated with Lactobacillus pentosus OM13 were characterized by the lowest concentrations of potential spoilage microorganisms. On the other hand, drupes mechanically harvested and subjected to spontaneous fermentation showed the highest concentration of Enterobacteriaceae and pseudomonads during transformation. The lowest decrease of pH (4.20) was registered for the trials inoculated with the starter culture. Differences in terms of volatile organic compounds were estimated among trials. Multivariate analysis showed that the olives processed from the drupes mechanically harvested and inoculated with starter were closely related to control production (drupes manually harvested) in terms of microbiological and pH values. Sensory analysis evidenced negative evaluations only for the uninoculated trials. CONCLUSION Drupes mechanically harvested and subjected to a driven fermentation with Lactobacillus pentosus OM13 determined the production of table olives with appreciable organoleptic features. Thus mechanical harvesting performed using a trunk shaker equipped with an inverse umbrella and the addition of starter lactic acid bacteria represents a valuable alternative to manual harvesting for table olive production at the industrial level.

Genetic similarity among Tunisian cultivated olive estimated through SSR markers

Olive (Olea europaea L. subsp. europaea var. europaea) is one of the oldest fruit tree in the Mediterranean basin, and is cultivated for oil and canned fruit. Part of this interest is driven by the economic importance of olive oil which is increasing throughout the world due to its beneficial effect to human health. In Tunisia, olive has great socio-economic importance, with more than 60 millions olive trees cultivated for olive oil production including a wide range of cultivars which are widely extended from the north to the south regions of the country for its high economic value. Here, we applied microsatellites (SSRs) molecular markers to assess the genetic variability of the most important Tunisian olive cultivars. In total, the 10 simple sequence repeats (SSR) loci revealed 73 alleles with a mean number of 07 alleles per locus were detected. The polymorphism index content (PIC) values were high (0.72) ranging from 0.86 at GAPU 103 to 0.56 at EMO 90. The analysis of the dendrogram showed six main separate groups.

Two new planting systems for early ripening peaches (Prunus persica L. Batsch): Yield and fruit quality in four low-chill cultivars

SummaryTrees of peach cvs Flordastar, Flordaprince, Flordacrest and Maravilha, low in chill requirement (Flordaprince 150; Flordacrest 350 C.U.), with a short fruit development period (Flordaprince 90; Flordacrest 110 d) and a very early ripening time (Flordastar mid May; Flordacrest first week of June), were planted in Sicily (37° 30′ Lat. N) both in a medium (667 trees per ha) and a high density (2000 trees per ha) plantation system. In the medium density planting system, the trees were trained to a Fusetto, and in the high density to a Y-shape. Both in the Fusetto and Y, the size of the trees was controlled by severe pruning soon after harvest, consisting in the shortening of most of the one year old wood. From mid June to October, the trees of all four cultivars were able to recover a “fruiting canopy”; flower bud density, flower fertility, fruit set, fruit quality and crop efficiency were not affected by the severe summer pruning. Due to the planting density and the pruning, the tree growth was restr...