Todd A. Carter
Salk Institute for Biological Studies
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Publication
Featured researches published by Todd A. Carter.
Journal of Medicinal Chemistry | 2009
Qi Chao; Kelly G. Sprankle; Robert M. Grotzfeld; Andiliy G. Lai; Todd A. Carter; Anne Marie Velasco; Ruwanthi N. Gunawardane; Merryl Cramer; Michael F. Gardner; Joyce K. James; Patrick Parvis Zarrinkar; Hitesh Patel; Shripad S. Bhagwat
Treatment of AML patients with small molecule inhibitors of FLT3 kinase has been explored as a viable therapy. However, these agents are found to be less than optimal for the treatment of AML because of lack of sufficient potency or suboptimal oral pharmacokinetics (PK) or lack of adequate tolerability at efficacious doses. We have developed a series of extremely potent and highly selective FLT3 inhibitors with good oral PK properties. The first series of compounds represented by 1 (AB530) was found to be a potent and selective FLT3 kinase inhibitor with good PK properties. The aqueous solubility and oral PK properties at higher doses in rodents were found to be less than optimal for clinical development. A novel series of compounds were designed lacking the carboxamide group of 1 with an added water solubilizing group. Compound 7 (AC220) was identified from this series to be the most potent and selective FLT3 inhibitor with good pharmaceutical properties, excellent PK profile, and superior efficacy and tolerability in tumor xenograft models. Compound 7 has demonstrated a desirable safety and PK profile in humans and is currently in phase II clinical trials.
Genome Biology | 2005
Todd A. Carter; Jennifer A. Greenhall; Shigeo Yoshida; Sebastian Fuchs; Robert Helton; Anand Swaroop; David J. Lockhart; Carrolee Barlow
BackgroundProgressive neurological dysfunction is a key aspect of human aging. Because of underlying differences in the aging of mice and humans, useful mouse models have been difficult to obtain and study. We have used gene-expression analysis and polymorphism screening to study molecular senescence of the retina and hippocampus in two rare inbred mouse models of accelerated neurological senescence (SAMP8 and SAMP10) that closely mimic human neurological aging, and in a related normal strain (SAMR1) and an unrelated normal strain (C57BL/6J).ResultsThe majority of age-related gene expression changes were strain-specific, with only a few common pathways found for normal and accelerated neurological aging. Polymorphism screening led to the identification of mutations that could have a direct impact on important disease processes, including a mutation in a fibroblast growth factor gene, Fgf1, and a mutation in and ectopic expression of the gene for the chemokine CCL19, which is involved in the inflammatory response.ConclusionWe show that combining the study of inbred mouse strains with interesting traits and gene-expression profiling can lead to the discovery of genes important for complex phenotypes. Furthermore, full-genome polymorphism detection, sequencing and gene-expression profiling of inbred mouse strains with interesting phenotypic differences may provide unique insights into the molecular genetics of late-manifesting complex diseases.
Journal of Psychiatric Research | 2012
Maurizio Fava; Steven D. Targum; Andrew A. Nierenberg; Leo S. Bleicher; Todd A. Carter; Pamela C. Wedel; René Hen; Fred H. Gage; Carrolee Barlow
We used in vitro neurogenesis-based human neural stem cell (hNSCs) assays and rodent in vivo behavioral assays to identify potential novel antidepressants. A combination of buspirone and melatonin displayed antidepressant activity in these assays whereas neither buspirone nor melatonin alone showed any antidepressant-like profile. After evaluating numerous combination ratios, we determined that low dose buspirone 15 mg combined with melatonin-SR 3 mg yielded optimal antidepressant efficacy in our pre-clinical platform. The low dose of buspirone suggested that antidepressant efficacy might be achieved with only minimal adverse event liability. Based on these data, we conducted an exploratory 6-week, multi-center, double-blind, randomized, placebo- and comparator-controlled study of the combination of buspirone and melatonin in subjects with acute Major Depressive Disorder (MDD). The combination treatment revealed a significant antidepressant response in subjects with MDD on several measures (Clinical Global Impression of Severity and Improvement, Inventory of Depressive Symptomatology) compared to either placebo or buspirone 15 mg monotherapy. These preliminary findings have clinical implications and suggest that a platform of pre-clinical neurogenesis matched with confirmatory behavioral assays may be useful as a drug discovery strategy.
Physiology & Behavior | 2001
Todd A. Carter; Jo A. Del Rio; Jennifer A. Greenhall; Mark L. Latronica; David J. Lockhart; Carrolee Barlow
Highly parallel gene expression profiling has the potential to provide new insight into the molecular mechanisms of complex brain diseases and behavioral traits. We review how gene expression profiling in various brain regions of inbred mouse strains has been used to identify genes that may contribute to strain-specific phenotypes. New data, which demonstrate the use of gene expression profiling in combination with behavioral testing to identify candidate genes involved in mediating variation in running wheel activity, are also presented. These and other studies suggest that a combination of gene expression profiling and more traditional genetic approaches, such as quantitative trait locus analysis, can be used to identify genes responsible for specific neurobehavioral phenotypes.
international conference on acoustics, speech, and signal processing | 2002
Gilles Fleury; Alfred O. Hero; Shigeo Yoshida; Todd A. Carter; Carrolee Barlow; Anand Swaroop
We introduce a robust method for detecting evolutionary trends of gene expression from a temporal sequence of microarray data. In this method we perform gene clustering via multi-objective optimization to reveal genes with interesting and statistically significant temporal patterns. We illustrate this gene filtering methodology in the context of exploring the time trajectories of mouse retinal genes acquired at different points over the lifetimes of a population of mice. For 6 time points sampled over 24 mouse subjects, our method can reliably reveal genes whose expression level increases or decreases monotonically, hits a peak or valley at birth, or exhibits other trends.
Proceedings of the National Academy of Sciences of the United States of America | 2005
Todd A. Carter; Lisa Wodicka; Neil P. Shah; Anne Marie Velasco; Miles A. Fabian; Daniel Kelly Treiber; Zdravko V. Milanov; Corey E. Atteridge; William H. Biggs; Philip T. Edeen; Mark Floyd; Julia M. Ford; Robert M. Grotzfeld; Sanna Herrgard; Darren E. Insko; Shamal A. Mehta; Hitesh Patel; William Pao; Charles L. Sawyers; Harold E. Varmus; Patrick Parvis Zarrinkar; David J. Lockhart
Proceedings of the National Academy of Sciences of the United States of America | 2000
Rickard Sandberg; Rie Yasuda; Daniel G. Pankratz; Todd A. Carter; Jo A. Del Rio; Lisa Wodicka; Mark Mayford; David J. Lockhart; Carrolee Barlow
Proceedings of the National Academy of Sciences of the United States of America | 2000
Masahiro Kaneshige; Kumiko Kaneshige; Xu Guang Zhu; Alexandra Dace; Lisa Garrett; Todd A. Carter; Rasa Kazlauskaite; Daniel G. Pankratz; Anthony Wynshaw-Boris; Samuel Refetoff; Bruce D. Weintraub; Mark C. Willingham; Carrolee Barlow; Sheue Yann Cheng
Genes & Development | 2001
Duane M. Allen; Henriette van Praag; Jasodhara Ray; Zoë Weaver; Christopher J. Winrow; Todd A. Carter; Ray Braquet; Elizabeth A. Harrington; Thomas Ried; Kevin D. Brown; Fred H. Gage; Carrolee Barlow
Human Molecular Genetics | 2004
Shigeo Yoshida; Alan J. Mears; James S. Friedman; Todd A. Carter; Shirley He; Edwin C. Oh; Yuezhou Jing; Rafal Farjo; Gilles Fleury; Carrolee Barlow; Alfred O. Hero; Anand Swaroop