Tomoyo Okumura

Microbial Processes Forming Daily Lamination in an Aragonite Travertine, Nagano-yu Hot Spring, Southwest Japan

An aragonite travertine at Nagano-yu hot spring, SW Japan, exhibits clear sub-millimeter-order lamination that resembles ancient ministromatolites. Thirty-three hours of continuous observation showed that the lamination is formed daily with no changes in physicochemical properties except light intensity. Phylotype analysis and fluorescence in situ hybridization indicate that Hydrogenophaga sp. is dominant and concentrated in diurnal layers containing abundant extracellular polymeric substances. Growth of Hydrogenophaga sp. is activated in the daytime, likely due to extracellular polymeric substance production by cyanobacterial photosynthesis. Daytime development of Hydrogenophaga-dominant biofilms, and the concurrent inhibiting effect on aragonite precipitation, explains the daily lamination observed.

Processes Forming Daily Lamination in a Microbe-Rich Travertine Under Low Flow Condition at the Nagano-yu Hot Spring, Southwestern Japan

A daily rhythm of microbial processes, in terms of sub-mm order lamination, was identified for a microbe-rich aragonite travertine formed at a low-flow site of the Nagano-yu Hot Spring in Southwestern Japan. Continuous observation and sampling clearly showed that the lamination consisted of diurnal microbe-rich layers (M-layers) and nocturnal crystalline layers (C-layers). The M-layers originated from biofilm formed by growth and upward migration of filamentous cyanobacteria related to Microcoleus sp., which can rapidly glide and secrete extracellular polymeric substances (EPS). During the daytime, cyanobacterial biofilm development inhibited aragonite precipitation on the travertine surface due to the calcium-binding ability of EPS. After sunset, aragonite precipitation started on the surface where aerobic heterotrophic bacteria decomposed EPS, which induced precipitation of micritic crystals. This early stage of C-layer formation was followed by abiotic precipitation of fan-shaped aragonite aggregates. Despite their major role in lamina formation, the cyanobacteria were readily degraded within 6–10 days after embedding, and the remaining open spaces in the M-layers were sparsely filled with crystal clots. These lamina-forming processes were different from those observed in a high-flow site where the travertine has a dense texture of aragonite crystals. The microbial travertine at Nagano-yu is similar to some Precambrian stromatolites in terms of in situ mineral precipitation, regular sub-mm order lamination, and arrangement of filamentous microbes; therefore, the lamination of these stromatolites possibly occur with a daily rhythm. The microbial processes demonstrated in this study may revise the interpretation of ancient stromatolite formation.

Advanced maritime adaptation in the western Pacific coastal region extends back to 35,000-30,000 years before present.

Significance Moving into oceanic islands after c. 50,000 years ago was a remarkable step forward in the history of worldwide expansion of modern humans. However, the developmental process of Pleistocene maritime technology remains unclear. So far, the only secure sources of information for such discussions were the Indonesian Archipelago and northern New Guinea as steppingstones from the Asian continent to Australia. This article reports a successful maritime adaptation that extended from ∼35,000 to 13,000 years ago on a small island environment in the southern Japanese Archipelago. The new evidence demonstrates a geographically wider distribution of early maritime technology that extended north to the midlatitude areas along the western Pacific coast. Maritime adaptation was one of the essential factors that enabled modern humans to disperse all over the world. However, geographic distribution of early maritime technology during the Late Pleistocene remains unclear. At this time, the Indonesian Archipelago and eastern New Guinea stand as the sole, well-recognized area for secure Pleistocene evidence of repeated ocean crossings and advanced fishing technology. The incomplete archeological records also make it difficult to know whether modern humans could sustain their life on a resource-poor, small oceanic island for extended periods with Paleolithic technology. We here report evidence from a limestone cave site on Okinawa Island, Japan, of successive occupation that extends back to 35,000−30,000 y ago. Well-stratified strata at the Sakitari Cave site yielded a rich assemblage of seashell artifacts, including formally shaped tools, beads, and the world’s oldest fishhooks. These are accompanied by seasonally exploited food residue. The persistent occupation on this relatively small, geographically isolated island, as well as the appearance of Paleolithic sites on nearby islands by 30,000 y ago, suggest wider distribution of successful maritime adaptations than previously recognized, spanning the lower to midlatitude areas in the western Pacific coastal region.

Evaluation of nutrient and energy sources of the deepest known serpentinite-hosted ecosystem using stable carbon, nitrogen, and sulfur isotopes

The Shinkai Seep Field (SSF) in the southern Mariana forearc discovered in 2010 is the deepest (~5,700 m in depth) known serpentinite-hosted ecosystem dominated by a vesicomyid clam, Calyptogena (Abyssogena) mariana. The pioneering study presumed that the animal communities are primary sustained by reducing fluid originated from the serpentinization of mantle peridotite. For understanding the nutrient and energy sources for the SSF community, this study conducted four expeditions to the SSF and collected additional animal samples such as polychaetes and crustaceans as well as sediments, fragments of chimneys developing on fissures of serpentinized peridotite, seeping fluid on the chimneys, and pore water within the chimneys. Geochemical analyses of seeping fluids on the chimneys and pore water of the chimneys revealed significantly high pH (~10) that suggest subseafloor serpentinization controlling fluid chemistry. Stable isotope systematics (carbon, nitrogen, and sulfur) among animals, inorganic molecules, and environmental organic matter suggest that the SSF animal community mostly relies on the chemosynthetic production while some organisms appear to partly benefit from photosynthetic production despite the great depth of SSF.