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Dive into the research topics where Tomoyo Sakata is active.

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Featured researches published by Tomoyo Sakata.


Chemical Society Reviews | 2011

Chemical ‘Jekyll and Hyde’s: small-molecule inhibitors of developmental signaling pathways

Tomoyo Sakata; James K. Chen

Small molecules that perturb developmental signaling pathways can have devastating effects on embryonic patterning, as evidenced by the chemically induced onset of cyclopic lambs and children with severely shortened limbs during the 1950s. Recent studies, however, have revealed critical roles for these pathways in human disorders and diseases, spurring the re-examination of these compounds as new targeted therapies. In this tutorial review, we describe four case studies of teratogenic compounds, including inhibitors of the Hedgehog (Hh), Wnt, and bone morphogenetic protein (BMP) pathways. We discuss how these teratogens were discovered, their mechanisms of action, their utility as molecular probes, and their potential as therapeutic agents. We also consider current challenges in the field and possible directions for future research.


Journal of Chemical Ecology | 2012

The Absolute Configuration of Chrysomelidial: A Widely Distributed Defensive Component Among Oribotririid Mites (Acari: Oribatida)

Nobuhiro Shimizu; Ryota Yakumaru; Tomoyo Sakata; Satoshi Shimano; Yasumasa Kuwahara

The absolute configuration of the iridoid monoterpene chrysomelidial from the oribatid mite, Austrotritia dentate Aoki, was elucidated by the GC-MS and GC comparisons with four synthetic stereoisomers of this well-known natural product. This identification was made possible by asymmetric synthesis of the known alcohol, (5S,8S)-chrysomelidiol. The GC retention time of diol derived from the natural oribatid dial agreed with that of the synthetic (5S,8S)-chrysomelidiol, confirming that the absolute configurations at C5 and C8 positions of the natural chrysomelidial are both S. Chrysomelidial was detected as a single or a major component in nine oribatid mites examined; thus, this compound is considered to be commonly distributed in Oribotririidae where it serves a defensive role.


Archive | 2014

Small-molecule antagonists of Gli function

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Figure 3, Structure of ML340

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Fig. 1, The Hh pathway

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Figure 4, Stability of ML340 in PBS at ambient temperature

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Table 6, SAR explorations of ML340

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Table 4, Probe and Analog Submissions to MLSMR (BioFocus DPI) for Gli-Sufu Antagonist ML340

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Table 3, Calculated Properties for ML340 (CID 6020222)

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen


Archive | 2014

Scheme 1, Synthesis of ML340, conditions

Robert Ardecky; Gavin Magnuson; Jiwen Zou; Santhi Ganji; Brock Brown; Tram Ngo; Julia Lee; Fu-Yue Zeng; Qing Sun; Derek Stonich; Sumeet Salaniwal; Tomoyo Sakata; Paul G. Rack; Jennifer K. T. Casabar; Arianna Mangravita-Novo; Layton H. Smith; Eduard Sergienko; Thomas Dy Chung; Anthony B. Pinkerton; Ian Pass; James K. Chen

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