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Featured researches published by Toshio Yanagida.


PLOS ONE | 2013

Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.

Tomonobu M. Watanabe; Katsumi Imada; Keiko Yoshizawa; Masayoshi Nishiyama; Chiaki Kato; Fumiyoshi Abe; Takamitsu Morikawa; Miki Kinoshita; Hideaki Fujita; Toshio Yanagida

Fluorescent protein-based indicators for intracellular environment conditions such as pH and ion concentrations are commonly used to study the status and dynamics of living cells. Despite being an important factor in many biological processes, the development of an indicator for the physicochemical state of water, such as pressure, viscosity and temperature, however, has been neglected. We here found a novel mutation that dramatically enhances the pressure dependency of the yellow fluorescent protein (YFP) by inserting several glycines into it. The crystal structure of the mutant showed that the tyrosine near the chromophore flipped toward the outside of the β-can structure, resulting in the entry of a few water molecules near the chromophore. In response to changes in hydrostatic pressure, a spectrum shift and an intensity change of the fluorescence were observed. By measuring the fluorescence of the YFP mutant, we succeeded in measuring the intracellular pressure change in living cell. This study shows a new strategy of design to engineer fluorescent protein indicators to sense hydrostatic pressure.


生物物理 | 2014

2P163 DNAオリガミバネを用いたミオシンVIのアンカー機能の分子動態計測(11. 分子モーター,ポスター,第52回日本生物物理学会年会(2014年度))

Mitsuhiro Iwaki; Shelley Wickham; Keigo Ikezaki; Toshio Yanagida; William M. Shih


生物物理 | 2014

2P134 転写制御ダイナミクスのin vitro1分子計測(08. 分子遺伝・遺伝情報制御,ポスター,第52回日本生物物理学会年会(2014年度))

Keisuke Fujita; Mitsuhiro Iwaki; Lorenzo Marcucci; Rika Kawaguchi; Toshio Yanagida


生物物理 | 2014

2P307 細胞内分子混雑感受性蛍光蛋白質の開発(27. バイオイメージング,ポスター,第52回日本生物物理学会年会(2014年度))

Takamitsu Morikawa; Hiroaki Machiyama; Kazuko Okamoto; Keiko Yoshizawa; Hideaki Fujita; Taro Ichimura; Katsumi Imada; Takeharu Nagai; Toshio Yanagida; Tomonobu M. Watanabe


生物物理 | 2013

3P140 自己組織化生体システムの機能創発機構解明に向けたメソスケール反応場のデザインと単分子分解能計測(11.分子モーター,ポスター,日本生物物理学会年会第51回(2013年度))

Mitsuhiro Iwaki; Keigo Ikezaki; Toshio Yanagida; William M. Shih


生物物理 | 2013

3P289 細胞内蛋白質混雑感受性蛍光蛋白質の開発(27.バイオイメージング,ポスター,日本生物物理学会年会第51回(2013年度))

Takamitsu Morikawa; Keiko Yoshizawa; Hideaki Fujita; Katsumi Imada; Takeharu Nagai; Toshio Yanagida; Tomonobu M. Watanabe


生物物理 | 2013

1P185 FRETセンサーを用いて生細胞内分子混雑を可視化する(12.細胞生物的課題,ポスター,日本生物物理学会年会第51回(2013年度))

Hiroaki Machiyama; Takamitsu Morikawa; Tomoyuki Yamaguchi; Toshio Yanagida; Tomonobu M. Watanabe; Hideaki Fujita


生物物理 | 2012

2PT118 蛋白質濃度感受性蛍光蛋白質の開発(日本生物物理学会第50回年会(2012年度))

Takamitsu Morikawa; Katsumi Imada; Keiko Yoshizawa; Toshio Yanagida; Takeharu Nagai; Tomonobu M. Watanabe


生物物理 | 2012

2PS028 低温電子線トモグラフィーによって明らかとなった細菌べん毛蛋白質輸送装置の構造と機能(日本生物物理学会第50回年会(2012年度))

Akihiro Kawamoto; Yusuke V. Morimoto; Takayuki Kato; Kelly T. Hughes; Toshio Yanagida; Keiichi Namba


生物物理 | 2012

2PS011 ミオシン6の双機能性とレバーアーム構造の関係(日本生物物理学会第50回年会(2012年度))

Keigo Ikezaki; Tomotaka Komori; Toshio Yanagida

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Mitsuo Ikebe

University of Massachusetts Medical School

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