Umit Celik
Istanbul Technical University
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Publication
Featured researches published by Umit Celik.
Biochemistry and biophysics reports | 2015
Fatih Inci; Umit Celik; Basak Turken; Hakan Özgür Özer; Fatma Nese Kok
To investigate drug–membrane protein interactions, an artificial tethered lipid bilayer system was constructed for the functional integration of membrane proteins with large extra-membrane domains such as multi-drug resistance protein 1 (MDR1). In this study, a modified lipid (i.e., 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[amino (polyethylene glycol)-2000] (DSPE-PEG)) was utilized as a spacer molecule to elevate lipid membrane from the sensor surface and generate a reservoir underneath. Concentration of DSPE-PEG molecule significantly affected the liposome binding/spreading and lipid bilayer formation, and 0.03 mg/mL of DSPE-PEG provided optimum conditions for membrane protein integration. Further, the incorporation of MDR1 increased the local rigidity on the platform. Antibody binding studies showed the functional integration of MDR1 protein into lipid bilayer platform. The platform allowed to follow MDR!-statin-based drug interactions in vitro. Each binding event and lipid bilayer formation was monitored in real-time using Surface Plasmon Resonance and Quartz Crystal Microbalance–Dissipation systems, and Atomic Force Microscopy was used for visualization experiments.
Review of Scientific Instruments | 2017
Umit Celik; Ozgur Karci; Y. Uysallı; H. Özgür Özer; Ahmet Oral
We describe a novel radiation pressure based cantilever excitation method for imaging in dynamic mode atomic force microscopy (AFM) for the first time. Piezo-excitation is the most common method for cantilever excitation, however it may cause spurious resonance peaks. Therefore, the direct excitation of the cantilever plays a crucial role in AFM imaging. A fiber optic interferometer with a 1310 nm laser was used both for the excitation of the cantilever at the resonance and the deflection measurement of the cantilever in a commercial low temperature atomic force microscope/magnetic force microscope (AFM/MFM) from NanoMagnetics Instruments. The laser power was modulated at the cantilevers resonance frequency by a digital Phase Locked Loop (PLL). The laser beam is typically modulated by ∼500 μW, and ∼141.8 nmpp oscillation amplitude is obtained in moderate vacuum levels between 4 and 300 K. We have demonstrated the performance of the radiation pressure excitation in AFM/MFM by imaging atomic steps in graphite, magnetic domains in CoPt multilayers between 4 and 300 K and Abrikosov vortex lattice in BSCCO(2212) single crystal at 4 K for the first time.
signal processing and communications applications conference | 2007
Haluk Eren; Umit Celik; Mustafa Poyraz
In the telesurgery operations, images should be high resolution and processed in real time. It seems difficult to accomplish this process in real time using only one computer. In our study, we propose to get 3D scene images inside and outside of surgery environment in real time and transfer them into different places. As known, 3D reconstruction needs intensive calculations. Nowadays, using distributed parallel systems are getting increase. Therefore, we investigate the performance rates using a group of inexpensive inert computers which work as a distributed parallel system supposed to be established in a medical environment.
Progress in Natural Science: Materials International | 2015
S. Karamat; Selda Sonusen; Umit Celik; Y. Uysallı; E. Özgönül; Ahmet Oral
Applied Surface Science | 2016
S. Karamat; Selda Sonusen; Umit Celik; Y. Uysallı; Ahmet Oral
World Academy of Science, Engineering and Technology, International Journal of Electrical and Computer Engineering | 2017
Haluk Eren; Umit Celik
Bulletin of the American Physical Society | 2016
Shumaila Karamat; Umit Celik; Ahmet Oral
Bulletin of the American Physical Society | 2016
Shumaila Karamat; Umit Celik; Ahmet Oral
Bulletin of the American Physical Society | 2016
Umit Celik; Ihsan Kehribar; Kubra Celik; H. Özgür Özer; Ahmet Oral
Bulletin of the American Physical Society | 2015
Ozgur Karci; Umit Celik; Ahmet Oral