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Dive into the research topics where Vikas Misra is active.

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Featured researches published by Vikas Misra.


Molecular and Cellular Biology | 2007

NRF2 Modulates Aryl Hydrocarbon Receptor Signaling: Influence on Adipogenesis

Soona Shin; Nobunao Wakabayashi; Vikas Misra; Shyam Biswal; Gum Hwa Lee; Elin S. Agoston; Masayuki Yamamoto; Thomas W. Kensler

ABSTRACT The NF-E2 p45-related factor 2 (NRF2) and the aryl hydrocarbon receptor (AHR) are transcription factors controlling pathways modulating xenobiotic metabolism. AHR has recently been shown to affect Nrf2 expression. Conversely, this study demonstrates that NRF2 regulates expression of Ahr and subsequently modulates several downstream events of the AHR signaling cascade, including (i) transcriptional control of the xenobiotic metabolism genes Cyp1a1 and Cyp1b1 and (ii) inhibition of adipogenesis in mouse embryonic fibroblasts (MEFs). Constitutive expression of AHR was affected by Nrf2 genotype. Moreover, a pharmacological activator of NRF2 signaling, CDDO-IM {1-[2-cyano-3,12-dioxooleana-1,9(11)-dien-28-oyl]imidazole}, induced Ahr, Cyp1a1, and Cyp1b1 transcription in Nrf2+/+ MEFs but not in Nrf2−/− MEFs. Reporter analysis and chromatin immunoprecipitation assay revealed that NRF2 directly binds to one antioxidant response element (ARE) found in the −230-bp region of the promoter of Ahr. Since AHR negatively controls adipocyte differentiation, we postulated that NRF2 would inhibit adipogenesis through the interaction with the AHR pathway. Nrf2−/− MEFs showed markedly accelerated adipogenesis upon stimulation, while Keap1−/− MEFs (which exhibit higher NRF2 signaling) differentiated slowly compared to their congenic wild-type MEFs. Ectopic expression of Ahr and dominant-positive Nrf2 in Nrf2−/− MEFs also substantially delayed differentiation. Thus, NRF2 directly modulates AHR signaling, highlighting bidirectional interactions of these pathways.


Science Signaling | 2010

Regulation of Notch1 Signaling by Nrf2: Implications for Tissue Regeneration

Nobunao Wakabayashi; Soona Shin; Stephen L. Slocum; Elin S. Agoston; Junko Wakabayashi; Mi Kyoung Kwak; Vikas Misra; Shyam Biswal; Masayuki Yamamoto; Thomas W. Kensler

The cell survival pathway mediated by the transcription factor Nrf2 facilitates tissue regeneration by promoting Notch1 signaling. Setting the Pace of Regeneration The ability of tissues to regenerate is critical for organismal survival, yet all of the mechanisms regulating this complex phenomenon are unknown. Nrf2 is a member of a family of transcription factors, and without the prosurvival signaling of Nrf2, mice are sensitive to oxidative and electrophilic stresses and exhibit delays in tissue regeneration. Wakabayashi et al. connect Nrf2 to the Notch signaling pathway, which is involved in determining cell proliferation and cell fate, by showing that Nrf2 transcriptionally stimulates expression of Notch1 to establish basal Notch1 signaling. The amount of Notch1 at the time of injury appears to set the pace of liver regeneration, and forced Notch signaling in hepatocytes restored liver regeneration in Nrf2-deficient mice. The Keap1-Nrf2-ARE signaling pathway elicits an adaptive response for cell survival after endogenous and exogenous stresses, such as inflammation and carcinogens, respectively. Keap1 inhibits the transcriptional activation activity of Nrf2 (p45 nuclear factor erythroid-derived 2–related factor 2) in unstressed cells by facilitating its degradation. Through transcriptional analyses in Keap1- or Nrf2-disrupted mice, we identified interactions between the Keap1-Nrf2-ARE and the Notch1 signaling pathways. We found that Nrf2 recognized a functional antioxidant response element (ARE) in the promoter of Notch1. Notch1 regulates processes such as proliferation and cell fate decisions. We report a functional role for this cross talk between the two pathways and show that disruption of Nrf2 impeded liver regeneration after partial hepatectomy and was rescued by reestablishment of Notch1 signaling.


American Journal of Physiology-lung Cellular and Molecular Physiology | 2009

Cigarette smoke-induced emphysema in A/J mice is associated with pulmonary oxidative stress, apoptosis of lung cells, and global alterations in gene expression

Tirumalai Rangasamy; Vikas Misra; Lijie Zhen; Clarke G. Tankersley; Rubin M. Tuder; Shyam Biswal

Cigarette smoking is the major risk factor for developing chronic obstructive pulmonary disease, the fourth leading cause of deaths in the United States. Despite recent advances, the molecular mechanisms involved in the initiation and progression of this disease remain elusive. We used Affymetrix Gene Chip arrays to determine the temporal alterations in global gene expression during the progression of pulmonary emphysema in A/J mice. Chronic cigarette smoke (CS) exposure caused pulmonary emphysema in A/J mice, which was associated with pronounced bronchoalveolar inflammation, enhanced oxidative stress, and increased apoptosis of alveolar septal cells. Microarray analysis revealed the upregulation of 1,190, 715, 260, and 246 genes and the downregulation of 1,840, 730, 442, and 236 genes in the lungs of mice exposed to CS for 5 h, 8 days, and 1.5 and 6 mo, respectively. Most of the genes belong to the functional categories of phase I genes, Nrf2-regulated antioxidant and phase II genes, phase III detoxification genes, and others including immune/inflammatory response genes. Induction of the genes encoding multiple phase I enzymes was markedly higher in the emphysematous lungs, whereas reduced expression of various cytoprotective genes constituting ubiquitin-proteasome complex, cell survival pathways, solute carriers and transporters, transcription factors, and Nrf2-regulated antioxidant and phase II-responsive genes was noted. Our data indicate that the progression of CS-induced emphysema is associated with a steady decline in the expression of various genes involved in multiple pathways in the lungs of A/J mice. Many of the genes discovered in this study could rationally play an important role in the susceptibility to CS-induced emphysema.


Journal of Applied Physiology | 2008

Effects of leptin deficiency on postnatal lung development in mice

Kewu Huang; Richard Rabold; Eric Abston; Brian Schofield; Vikas Misra; Ewa M Galdzicka; Hannah Lee; Shyam Biswal; Wayne Mitzner; Clarke G. Tankersley

Leptin modulates energy metabolism and lung development. We hypothesize that the effects of leptin on postnatal lung development are volume dependent from 2 to 10 wk of age and are independent of hypometabolism associated with leptin deficiency. To test the hypotheses, effects of leptin deficiency on lung maturation were characterized in age groups of C57BL/6J mice with varying Lep(ob) genotypes. Quasi-static pressure-volume curves and respiratory impedance measurements were performed to profile differences in respiratory system mechanics. Morphometric analysis was conducted to estimate alveolar size and number. Oxygen consumption was measured to assess metabolic rate. Lung volume at 40-cmH(2)O airway pressure (V(40)) increased with age in each genotypic group, and V(40) was significantly (P < 0.05) lower in leptin-deficient (ob/ob) mice beginning at 2 wk. Differences were amplified through 7 wk of age relative to wild-type (+/+) mice. Morphometric analysis showed that alveolar surface area was lower in ob/ob compared with +/+ and heterozygote (ob/+) mice beginning at 2 wk. Unlike the other genotypic groups, alveolar size did not increase with age in ob/ob mice. In another experiment, ob/ob at 4 wk received leptin replacement (5 microg.g(-1) x day(-1)) for 8 days, and expression levels of the Col1a1, Col3a1, Col6a3, Mmp2, Tieg1, and Stat1 genes were significantly increased concomitantly with elevated V(40). Leptin-induced increases in V(40) corresponded with enlarged alveolar size and surface area. Gene expression suggested a remodeling event of lung parenchyma after exogenous leptin replacement. These data support the hypothesis that leptin is critical to postnatal lung remodeling, particularly related to increased V(40) and enlarged alveolar surface area.


American Journal of Physiology-regulatory Integrative and Comparative Physiology | 2008

Exposure to inhaled particulate matter impairs cardiac function in senescent mice

Clarke G. Tankersley; Hunter C. Champion; Eiki Takimoto; Kathleen L. Gabrielson; Djahida Bedja; Vikas Misra; Hazim El-Haddad; Richard Rabold; Wayne Mitzner

Daily exposure to particulate matter (PM) is known to adversely affect cardiac function and is also known to be exaggerated with senescence. This study tests the hypothesis that cardiac function is uniquely altered by PM exposure in senescent mice. A mechanism for PM-induced cardiac effects is also postulated by examining the activity of nitric oxide synthase (NOS) and the generation of reactive oxygen species (ROS) in heart tissue. Echocardiography is performed in awake 18- and 28-mo-old mice at baseline and immediately following 3-h exposures to either filtered air or carbon black (CB; approximately 400 microg/m3) on 4 days. At 28 mo, left ventricular diameter at end-systole and end-diastole is significantly (P < 0.05) elevated, and fractional shortening is significantly reduced (49 +/- 3% vs. 56 +/- 3%) with CB exposure. In vivo hemodynamic measurements at 28 mo also demonstrate significant (P < 0.05) reductions in ejection fraction and increases in right ventricular and pulmonary vascular pressures following CB exposure. Functional changes at 28 mo are associated with increased ROS production as suggested by enhanced luminol activity. This elevated ROS production with aging and CB exposure is attributable to NOS uncoupling. Measurements of natriuretic peptide (atrial and brain) transcription and matrix metalloproteinase (MMP2 and MMP9) activity in heart tissue are significantly (P < 0.05) amplified with senescence and exposure to CB, pointing to increased cardiac stress and remodeling. These results demonstrate that acute PM exposure reduces cardiac contractility in senescent mice, and this decline in function is associated with increased ROS production linked to NOS uncoupling.


BMC Genomics | 2006

Ethanol sensitivity: a central role for CREB transcription regulation in the cerebellum

George K. Acquaah-Mensah; Vikas Misra; Shyam Biswal

BackgroundLowered sensitivity to the effects of ethanol increases the risk of developing alcoholism. Inbred mouse strains have been useful for the study of the genetic basis of various drug addiction-related phenotypes. Inbred Long-Sleep (ILS) and Inbred Short-Sleep (ISS) mice differentially express a number of genes thought to be implicated in sensitivity to the effects of ethanol. Concomitantly, there is evidence for a mediating role of cAMP/PKA/CREB signalling in aspects of alcoholism modelled in animals. In this report, the extent to which CREB signalling impacts the differential expression of genes in ILS and ISS mouse cerebella is examined.ResultsA training dataset for Machine Learning (ML) and Exploratory Data Analyses (EDA) was generated from promoter region sequences of a set of genes known to be targets of CREB transcription regulation and a set of genes whose transcription regulations are potentially CREB-independent. For each promoter sequence, a vector of size 132, with elements characterizing nucleotide composition features was generated. Genes whose expressions have been previously determined to be increased in ILS or ISS cerebella were identified, and their CREB regulation status predicted using the ML scheme C4.5. The C4.5 learning scheme was used because, of four ML schemes evaluated, it had the lowest predicted error rate. On an independent evaluation set of 21 genes of known CREB regulation status, C4.5 correctly classified 81% of instances with F-measures of 0.87 and 0.67 respectively for the CREB-regulated and CREB-independent classes. Additionally, six out of eight genes previously determined by two independent microarray platforms to be up-regulated in the ILS or ISS cerebellum were predicted by C4.5 to be transcriptionally regulated by CREB. Furthermore, 64% and 52% of a cross-section of other up-regulated cerebellar genes in ILS and ISS mice, respectively, were deemed to be CREB-regulated.ConclusionThese observations collectively suggest that ethanol sensitivity, as it relates to the cerebellum, may be associated with CREB transcription activity.


PLOS Medicine | 2006

Dysfunctional KEAP1–NRF2 Interaction in Non-Small-Cell Lung Cancer

Anju Singh; Vikas Misra; Rajesh K. Thimmulappa; Hannah Lee; Stephen Ames; Mohammad O. Hoque; James G. Herman; Stephen B. Baylin; David Sidransky; Edward Gabrielson; Malcolm V. Brock; Shyam Biswal


Archives of Biochemistry and Biophysics | 2006

Nrf2 regulates an adaptive response protecting against oxidative damage following diquat- mediated formation of superoxide anion

William O. Osburn; Nobunao Wakabayashi; Vikas Misra; Tricia L. Nilles; Shyam Biswal; Michael A. Trush; Thomas W. Kensler


Physiological Genomics | 2007

Global expression profiles from C57BL/6J and DBA/2J mouse lungs to determine aging-related genes

Vikas Misra; Hannah Lee; Anju Singh; Kewu Huang; Rajesh K. Thimmulappa; Wayne Mitzner; Shyam Biswal; Clarke G. Tankersley


Archive | 2015

in micechanges in airway and tissue mechanics

D. Sly; Debra J. Turner; Elizabeth M. Bozanich; Rachel A. Collins; Cindy Thamrin; Hannah Lee; Shyam Biswal; W. Mitzner; Clarke G. Tankersley; Kewu Huang; Richard Rabold; Eric Abston; Brian Schofield; Vikas Misra; Graeme R. Zosky; Vincenzo Cannizzaro; Zoltán Hantos; Peter D. Sly

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Shyam Biswal

Johns Hopkins University

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Hannah Lee

Johns Hopkins University

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Wayne Mitzner

Johns Hopkins University

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Kewu Huang

Capital Medical University

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Richard Rabold

Johns Hopkins University

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Anju Singh

Johns Hopkins University

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Eric Abston

Johns Hopkins University

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