Viswambharan Sarasan

CONSERVATION IN VITRO OF THREATENED PLANTS – PROGRESS IN THE PAST DECADE

SummaryIn vitro techniques have found increasing use in the conservation of threatened plants in recent years and this trend is likely to continue as more species face risk of extinction. The Micropropagation Unit at Royal Botanic Gardens, Kew, UK (RBG Kew) has an extensive collection of in vitro plants including many threatened species from throughout the world. The long history of the unit and the range of plants cultured have enabled considerable expertise to be amassed in identifying the problems and developing experimental strategies for propagation and conservation of threatened plants. While a large body of knowledge is available on the in vitro culture of plants, there are limited publications relating to threatened plant conservation. This review highlights the progress in in vitro culture and conservation of threatened plants in the past decade (1995–2005) and suggests future research directions. Works on non-threatened plants are also included wherever methods have applications in rare plant conservation. Recalcitrant plant materials collected from the wild or ex situ collections are difficult to grow in culture. Different methods of sterilization and other treatments to establish clean material for culture initiation are reviewed. Application of different culture methods for multiplication, and use of unconventional materials for rooting and transplantation are reviewed. As the available plant material for culture initiation is scarce and in many cases associated with inherent problems such as low viability and endogenous contamination, reliable protocols on multiplication, rooting, and storage methods are very important. In this context, photoautotrophic micropropagation has the potential for development as a routine method for the in vitro conservation of endangered plants. Long-term storage of material in culture is challenging and the potential applications of cryopreservation are significant in this area. Future conservation biotechnology research and its applications must be aimed at conserving highly threatened, mainly endemic, plants from conservation hotspots.

Biodiversity conservation and conservation biotechnology tools

This special issue is dedicated to the in vitro tools and methods used to conserve the genetic diversity of rare and threatened plant species from around the world. Species that are on the brink of extinction because of the rapid loss of genetic diversity and habitat come mainly from resource-poor areas of the world and from global biodiversity hotspots and island countries. These species are unique because they are endemic, and only a few small populations or sometimes only a few individuals remain in the wild. Therefore, the challenges to support conservation by in vitro measures are many and varied. The editors of this invited issue solicited papers from experts from Asia, Africa, Europe, Australia, and North and South America. This compilation of articles describes the efforts in these diverse regions toward saving plants from extinction, and details the direct application of in vitro and cryopreservation methods. In addition, these contributions provide guidance on propagation of rare plants, including techniques for large-scale propagation, storage, and reintroduction. The in vitro techniques for conserving plant biodiversity include shoot apical or axillary-meristem-based micropropagation, somatic embryogenesis, cell culture technologies and embryo rescue techniques, as well as a range of in vitro cold storage and cryopreservation protocols, and they are discussed in depth in this issue.

Applications of phytochemical and in vitro techniques for reducing over-harvesting of medicinal and pesticidal plants and generating income for the rural poor

Plants provide medicine and pest control resources for millions of poor people world-wide. Widespread harvesting of medicinal and pesticidal plants puts pressure on natural populations, thus severely compromising their contribution to the income and well-being of traders and consumers. The development of in vitro propagation techniques appropriate for developing countries will provide a robust platform for effective propagation and cultivation of endangered plants. This review focuses on advances in the application of phytochemical and in vitro tools to identify and rapidly propagate medicinal and pesticidal plants. Problems of over-harvesting can be alleviated and ex situ cultivation in agroforestry systems can be facilitated through improving seed germination, in vitro cloning and the use of mycorrhizal fungi. We also present a case for effective use of phytochemical analyses for the accurate identification of elite materials from wild stands and validation of the desired quality in order to counter loss of efficacy in the long run through selection, propagation or ex situ management in agroforestry systems. Future prospects are discussed in the context of medicinal activity screening, sustainable propagation, on-farm planting, management and utilization.

Conservation in vitro of rare and threatened ferns—case studies of biodiversity hotspot and island species

The importance of in vitro tools to complement other ex situ methods for saving plants from extinction is more relevant than ever before. More than 50% of the world’s plant species are endemic to the 34 global biodiversity hotspots (GBHs), each holding at least 1,500 endemic plant species. In addition, a large number of small islands hold a number of endemic species on the brink of extinction. Conservation support concentrating more on these hotspots and small islands would significantly reduce the loss of species that is currently occurring. In the majority of these cases, the resources are either locally scarce or difficult to access for in vitro conservation to support other ex situ measures. Most island countries are small, and their geographical position is a stumbling block to initiate active partnerships with other countries when they need to use in vitro tools to rescue plants that produce recalcitrant seeds/spores or propagate only by vegetative means. However, many biodiversity hotspot countries have facilities and expertise, and they concentrate on their own flora for in vitro conservation programmes. For decades, because of the grave threat these plants face, the Conservation Biotechnology Unit, previously known as the Micropropagation Unit, at Royal Botanic Gardens Kew (RBG Kew) has been at the forefront of assisting countries to save their valuable biodiversity through both in situ and ex situ methods. Approaches mentioned here highlight work on recalcitrant ferns from GBHs and small islands. Source materials from recalcitrant species, either spore or seed and in some cases vegetative material, need to be used immediately after collection for tangible results in vitro. This becomes more difficult when only a few plants or small populations are left in the wild. The task becomes harder when available material is small in quantity, and there is greater restriction on the use of available genetic diversity in the wild. This paper highlights the importance of proper collection measures, in vitro culture procedures and cryopreservation and methods for the integrated conservation of threatened ferns from both GBHs and small islands. The importance of international networking to achieve these conservation goals also will be discussed.

Importance of in vitro technology to future conservation programmes worldwide

SummaryThe latest IUCN statistics show that of over 12,000 plant species, 70% are threatened, 19% are critically endangered and 28 species are extinct in the wild. Target 8 of the Global Strategy for Plant Conservation (GSPC) highlights the importance of ex situ conservation of critically endangered plants. Long-term germplasm storage for species with recalcitrant seeds needs alternative measures. In vitro methods complement seed banking and other ex situ measures and are vital for long-term conservation. Conservation Biotechnology at RBG Kew is currently working on a number of rare and threatened recalcitrant species from biodiversity-rich areas of the world to develop good quality in vitro propagules for cryopreservation, recovery and restoration projects. The importance of successful in vitro propagation methods, transplantation technologies, cryopreservation and international networking for the integrated conservation of these species are discussed in detail.

Novel micropropagation and weaning methods for the integrated conservation of a critically endangered tree species, Medusagyne oppositifolia

Medusagyne oppositifolia is a critically endangered monotypic species with only a few trees left in the wild. Due to invasion and habitat clearance, genetic diversity of this species has been reduced to an alarmingly low level. Long-term in vitro cultures of M. oppositifolia were slow-growing and eventually lost the ability to multiply and root. Because of the lack of new seed and vegetative materials, efforts were made to rejuvenate the existing cultures. This was attempted by a series of steps involving serial pruning of the shoot tips and growing on a modified MS medium containing silver nitrate and thidiazuron. Rapid cycling clonal propagules were produced this way from cultured nodes. Isolated shoots were rooted on Florialite™, and rooted plants were weaned in a transition stage using a Nutrient Film Technique (NFT) hydroponic system before being completely weaned under glasshouse conditions. The importance of screening cultures for multiplication and rooting efficiency during long-term maintenance is discussed in the context of stress metabolite production and its influence on growth in culture. Factors contributing to rejuvenation of old cultures, application of unconventional supporting systems for rooting and application of the hydroponic system as a weaning tool are also discussed.

Non-specific symbiotic germination of Cynorkis purpurea (Thouars) Kraezl., a habitat-specific terrestrial orchid from the Central Highlands of Madagascar

Orchids, particularly terrestrial taxa, rely mostly on basidiomycete fungi in the Cantharellales and Sebacinales that trigger the process of seed germination and/or initiate the full development of the seedling. During the course of development, orchids may associate with the same fungus, or they may enlist other types of fungi for their developmental needs leading to resilience in a natural setting. This study examined in vitro seed germination and seedling developmental behavior of Cynorkis purpurea, a terrestrial orchid from the Central Highlands of Madagascar. This species is mostly restricted to gallery forests in the Itremo Massif, in moist substrate between rocks bordering streams. The main objective was to understand the influence of diverse mycorrhizal fungi on seed germination and further development of C. purpurea. The study aims to compare symbiotic versus asymbiotic germination and seedling development with seeds and fungi collected from a 13-km2 area in the Itremo region. Seeds collected from the wild were sown with diverse orchid mycorrhizal fungi (OMF) spanning 12 operational taxonomic units (OTUs) in three genera (Tulasnella, Ceratobasidium, and Sebacina) acquired from different habitats. Treatments were assessed in terms of the percentage of germinated seeds and fully developed seedlings against those in asymbiotic control media treatments. Overall, OMF significantly improved seedling development within the 12-week experiment period. Sebacina as a genus was the most effective at promoting seedling development of C. purpurea, as well as having the ability to enter into successful symbiotic relationships with orchids of different life forms; this new knowledge may be especially useful for orchid conservation practiced in tropical areas like Madagascar. A Sebacina isolate from an epiphytic seedling of Polystachya concreta was the most effective at inducing rapid seedling development and was among the five that outperformed fungi isolated from roots of C. purpurea. C. purpurea was found to be a mycorrhizal generalist, despite its specific habitat preference, highlighting the complex interaction between the plant, fungi, and the environment. The potential impact on conservation strategies of understanding the requirements for orchid seed germination and development by identifying and using OMF from diverse sources is discussed in detail.

Approaches to develop a road map for the long-term conservation of an island endemic genus Cylindrocline

Habitat fragmentation and invasive alien species contribute to genetic bottlenecks and the threat of extinction of many endemic species of Mauritius, part of the Madagascan and Indian Ocean biodiversity hotspot. The genus Cylindrocline has two species, C. commersonii (critically endangered) and C. lorencei (extinct in the wild). The last living specimens of C. lorencei disappeared in the wild after the recorded collecting of seeds in 1982 by Conservatoire Botanique National de Brest (CBN Brest). Embryo rescue was used as a method to germinate these seeds and the seedlings raised this way were shared by CBN Brest with Royal Botanic Gardens Kew (RBG Kew) as part of an exchange programme in 2001. Mature plants both at CBN Brest and RBG Kew stopped producing viable seeds and this has made the long-term conservation of C. lorencei even more difficult. Seeds of C. commersonii collected from the wild in 2010 have a very low viability while ex situ grown C. commersonii produce non-viable seeds. Molecular studies conducted in C. lorencei using amplified fragment length polymorphisms (AFLP) showed no genetic variability among remaining individuals. Two samples of C. commersonii showed a very small amount of genetic variability. The variability between the two species was well within the limits commonly found within species or between closely related species and the long-term conservation of the genus requires a radical (to a degree) approach to avoid its extinction. The importance of novel approaches for restoration and long-term conservation are discussed.

Endophytic fungal diversity of Fragaria vesca, a crop wild relative of strawberry, along environmental gradients within a small geographical area

Background Fungal endophytes are highly diverse ubiquitous asymptomatic microorganisms, some of which appear to be symbiotic. Depending on abiotic conditions and genotype of the plant, the diversity of endophytes may confer fitness benefits to plant communities. Methods We studied a crop wild relative (CWR) of strawberry, along environmental gradients with a view to understand the cultivable root-derived endophytic fungi that can be evaluated for promoting growth and tolerating stress in selected plant groups. The main objectives were to understand whether: (a) suboptimal soil types are drivers for fungal distribution and diversity; (b) high pH and poor nutrient availability lead to fungal-plant associations that help deliver fitness benefits; and (c) novel fungi can be identified for their use in improving plant growth, and alleviate stress in diverse crops. Results The study revealed that habitats with high pH and low nutrient availability have higher fungal diversity, with more rare fungi isolated from locations with chalky soil. Plants from location G were the healthiest even though soil from this location was the poorest in nutrients. Study of environmental gradients, especially extreme habitat types, may help understand the root zone fungal diversity of different functional classes. Two small in vitro pilot studies conducted with two isolates showed that endophytic fungi from suboptimal habitats can promote plant growth and fitness benefits in selected plant groups. Discussion Targeting native plants and crop wild relatives for research offers opportunities to unearth diverse functional groups of root-derived endophytic fungi that are beneficial for crops.

Large Scale Propagation and In vitro Weaning for the Restoration Viola palustris to Support Assisted Colonisation of a Threatened Butterfly

The distribution and abundance of Boloria selene (small pearl-bordered fritillary butterfly SPBF) declined over the decades in many parts of the UK. Availability of food plants, especially marsh violet (Viola palustris), for the caterpillars of the SPBF has been identified as one of the major limiting factors for this decline. To achieve augmentation of existing colonies and develop new populations of SPBF large numbers of marsh violet propagules were required specifically to feed the larvae. The main objectives of the study were to produce thousands of good quality marsh violet propagules to restore selected habitats in the Heart of Durham, Northern England, using in vitro methods. Preliminary trials showed that in vitro multiplication of seedlings from wild collected seeds through conventional agar-based cultures was lengthy, expensive and turned out to be a non-viable route to achieve the objectives. This study explored the potential of bioreactor-based cloning and cost-effective one step rooting and weaning. Robust propagules, ready for transplantation following rapid propagation and one step rooting and weaning in vitro, were raised in a plug system for transplantation and establishment under field conditions. This was achieved by using simple and cost-effective methods to support the large-scale restoration exercise using 14,000 propagules. Application of high throughput micropropagation and low cost one step weaning systems for time-bound conservation and restoration projects are discussed in detail. This research highlights the important role of in vitro methods to support integrated biodiversity conservation of threatened native plant and butterfly.