W. Robert Scheidt

Molecular stereochemistry of phthalocyanatozinc(II)

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Oriented Single-Crystal Nuclear Resonance Vibrational Spectroscopy of [Fe(TPP)(MI)(NO)]: Quantitative Assessment of the trans Effect of NO

This paper presents oriented single-crystal Nuclear Resonance Vibrational Spectroscopy (NRVS) data for the six-coordinate (6C) ferrous heme-nitrosyl model complex [(57)Fe(TPP)(MI)(NO)] (1; TPP(2-) = tetraphenylporphyrin dianion; MI = 1-methylimidazole). The availability of these data enables for the first time the detailed simulation of the complete NRVS data, including the porphyrin-based vibrations, of a 6C ferrous heme-nitrosyl, using our quantum chemistry centered normal coordinate analysis (QCC-NCA). Importantly, the Fe-NO stretch is split by interaction with a porphyrin-based vibration into two features, observed at 437 and 472 cm(-1). The 437 cm(-1) feature is strongly out-of-plane (oop) polarized and shows a (15)N(18)O isotope shift of 8 cm(-1) and is therefore assigned to nu(Fe-NO). The admixture of Fe-N-O bending character is small. Main contributions to the Fe-N-O bend are observed in the 520-580 cm(-1) region, distributed over a number of in-plane (ip) polarized porphyrin-based vibrations. The main component, assigned to delta(ip)(Fe-N-O), is identified with the feature at 563 cm(-1). The Fe-N-O bend also shows strong mixing with the Fe-NO stretching internal coordinate, as evidenced by the oop NRVS intensity in the 520-580 cm(-1) region. Very accurate normal mode descriptions of nu(Fe-NO) and delta(ip)(Fe-N-O) have been obtained in this study. These results contradict previous interpretations of the vibrational spectra of 6C ferrous heme-nitrosyls where the higher energy feature at approximately 550 cm(-1) had usually been associated with nu(Fe-NO). Furthermore, these results provide key insight into NO binding to ferrous heme active sites in globins and other heme proteins, in particular with respect to (a) the effect of hydrogen bonding to the coordinated NO and (b) changes in heme dynamics upon NO coordination. [Fe(TPP)(MI)(NO)] constitutes an excellent model system for ferrous NO adducts of myoglobin (Mb) mutants where the distal histidine (His64) has been removed. Comparison to the reported vibrational data for wild-type (wt) Mb-NO then shows that the effect of H bonding to the coordinated NO is weak and mostly leads to a polarization of the pi/pi* orbitals of bound NO. In addition, the observation that delta(ip)(Fe-N-O) does not correlate well with nu(N-O) can be traced back to the very mixed nature of this mode. The Fe-N(imidazole) stretching frequency is observed at 149 cm(-1) in [Fe(TPP)(MI)(NO)], and spectral changes upon NO binding to five-coordinate ferrous heme active sites are discussed. The obtained high-quality force constants for the Fe-NO and N-O bonds of 2.57 and 11.55 mdyn/A can further be compared to those of corresponding 5C species, which allows for a quantitative analysis of the sigma trans interaction between the proximal imidazole (His) ligand and NO. This is key for the activation of the NO sensor soluble guanylate cyclase. Finally, DFT methods are calibrated against the experimentally determined vibrational properties of the Fe-N-O subunit in 1. DFT is in fact incapable of reproducing the vibrational energies and normal mode descriptions of the Fe-N-O unit well, and thus, DFT-based predictions of changes in vibrational properties upon heme modification or other perturbations of these 6C complexes have to be treated with caution.

Hydrosulfide (HS-) coordination in iron porphyrinates.

Recent reports of potential physiological roles of hydrogen sulfide have prompted interest in heme-sulfide interactions. Heme-H(2)S and/or heme-HS(-) interactions could potentially occur during endogenous production, transport, signaling events, and catabolism of H(2)S. We have investigated the interaction of the hydrosulfide ion (HS(-)) with iron porphyrinates. UV-vis spectral studies show the formation of [Fe(Por)(SH)](-), [Fe(Por)(SH)(2)](2-), and the mixed-ligand species [Fe(Por)(Im)(SH)](-). UV-vis binding studies of [Fe(OEP)] and [Fe(T-p-OMePP)] (OEP = octaethylporphyrinate; T-p-OMePP = tetra-p-methoxyphenylporphyrinate) with HS(-) allowed for calculation of the formation constants and extinction coefficients of mono- and bis-HS(-) complexes. We report the synthesis of the first HS(-)-bound iron(II) porphyrin compounds, [Na(222)][Fe(OEP)(SH)].0.5C(6)H(6) and [Na(222)][Fe(T-p-OMePP)(SH)].C(6)H(5)Cl (222 = Kryptofix-222). Characterization by single-crystal X-ray analysis, mass spectrometry, and Mossbauer and IR spectroscopy is all consistent with that of known sulfur-bound high-spin iron(II) compounds. The Fe-S distances of 2.3929(5) and 2.3887(13) A are longer than all reported values of [Fe(II)(Por)(SR)](-) species. An analysis of the porphyrin nonplanarity for these derivatives and for all five-coordinate high-spin iron(II) porphyrinate derivatives with an axial anion ligand is presented. In our hands, attempts to synthesize iron(III) HS(-) derivatives led to iron(II) species.

Synthesis and characterization of a neutral, low spin iron(III) complex of a hexadentate tripodal ligand containing three imidazolate arms. Use as a dinucleating agent

Abstract The iron(III) complex of the Schiff base formed from the condensation of 1 equiv. of trist(2-aminoethyl)amine (tren) and 3 equiv. of 4-methyl-5-imidazolecar☐aldehyde has been synthesized by the reaction of iron(III) methoxide, tren and 4-methyl-5-imidazolecar☐aldehyde in methanol. Fetren(meim)3 is low spin as indicated by magnetic moment, Mo¨ssbauer and ESR measurements. The crystal structure of Fetren(meim)3 was determined (space group Pna21, R1 = 0.0331 and wR2 = 0.0857). The complex is six-coordinate although the ligand is potentially heptadentate. Basicity of the three ‘backside’ imidazolate nitrogens is demonstrated in the crystal structure by H-bonding interactions and in solution by reactions with acidic metal complexes. ZnTPP and M(hfa)2 (M = Cu(II), Ni(II)), to give imidazolate bridged adducts. Products of the reaction of Fetren(meim)3 with M(hfa)2 were isolated and identified as the 1:1 adducts.

Synthesis of porphyrins tailored with eight facially-encumbering groups. An approach to solid-state light-harvesting complexes

Abstract Synthetic models of the photosynthetic antenna complexes must achieve long-range 3-dimensional order encompassing a large number of porphyrinic pigments with limited direct contact of the pigments. In order to develop solid-state antenna complexes, we have synthesized porphyrins bearing benzyloxy groups projecting over both faces and optionally also around the periphery of the porphyrin. Routes have been established for prefunctionalizing benzaldehydes with various benzyloxy groups. Reaction of 2,6-bis, 3,5-bis, or 2,4,6-tris-(benzyloxy)benzaldehydes with pyrrole via the room temperature two-step one-flask porphyrin reaction provides direct access to the facially-encumbered porphyrins. The benzyloxybenzaldehydes react as efficiently as methoxybenzaldehydes, indicating the utility of the -OCH2- unit for introducing large substituents near the face of the porphyrin. The octakis and dodecakis(benzyloxy)porphyrins exhibit characteristic porphyrin absorption and fluorescence properties in solution. The crystal structure of meso-tetrakis[2,6-bis(2,3,4,5,6-pentafluorobenzyloxy)phenyl]porphyrin has been determined. The pentafluorobenzyloxy substituents provide a cavity on each side of the porphyrin plane which has an approximate cylindrical shape with a diameter of ~ 7.5 A and a height of ≥ 4.5 A. The porphyrin core parameters are those obtained for free base derivatives in which the inner hydrogen atoms are ordered. Crystal data: a = 14.759 (1) A, b = 25.519 (2) A, c = 13.100 (1) A, α = 100.04 (1), β = 99.83 (1), γ = 88.25 (1), V = 4767.3 (6) A3, all measurements at 127 K, triclinic, space group P 1 , Z = 2 R1(F) = 0.097, for 10020 “observed” data, and wR2(F2) = 0.275 for 17761 total unique (all) data.

Just a proton: distinguishing the two electronic states of five-coordinate high-spin iron(II) porphyrinates with imidazole/ate coordination.

We report detailed studies on two S = 2 electronic states of high-spin iron(II) porphyrinates. These two states are exemplified by the five-coordinate derivatives with either neutral imidazole or anionic imidazolate as the axial ligand. The application of several physical methods all demonstrate distinctive differences between the two states. These include characteristic molecular structure differences, Mossbauer spectra, magnetic circular dichroism spectroscopy, and integer-spin EPR spectral distinctions. These distinctions are supported by DFT calculations. The two states are characterized by very different spatial properties of the doubly occupied orbital of the high-spin that are consonant with the physical properties.

Synthesis and characterization of manganese(II) and iron(III) d5 tripodal imidazole complexes. Effect of oxidation state, protonation state and ligand conformation on coordination number and spin state

The 1 : 3 Schiff base condensates of tris(2-aminoethyl)amine (tren) or tris(3-aminopropyl)amine (trpn) with 4-methyl-5-imidazolecarboxaldehyde, H3L1 and H3L2, respectively, were generated in situ and used to prepare complexes with manganese(II) and iron(III). The resultant complexes, [MnH3L1](ClO4)2, [MnH3L1](ClO4)2.EtOH.H2O, [MnH3L2](ClO4)2, [FeH3L1](ClO4)3.1.5(EtOH) and [FeHL1](I3) (0.525)(I)(0.475).2.625H2O, have been characterized by EA, IR, ES MS, variable temperature magnetic susceptibility, X-ray crystallography, and Mössbauer spectroscopy for the iron complexes. The three manganese(II) complexes are high spin with [MnH3L2](ClO4)2 exhibiting coordination number seven while the others are six coordinate. [FeH3L1](ClO4)3.1.5(EtOH) has two iron sites, a seven coordinate and a pseudo seven coordinate site. The complex is high spin at room temperature but exhibits a magnetic moment that decreases with temperature corresponding to conversion of one of the sites to low spin. [FeHL1](I3) (0.525)(I)(0.475).2.625H2O is low spin even at room temperature. In the present complexes the apical nitrogen atom, N(ap), of the tripodal ligand is pyramidal and directed toward the metal atom. The data show that the M-N(ap) distance decreases as the oxidation state of the metal increases, as the number of bound imidazole protons on the ligand increases, and as the number of carbon atoms in the backbone of the ligand (tren vs. trpn) increases. In a limiting sense, short M-N(ap) distances result in high spin seven coordinate mono capped octahedral complexes and long M-N(ap) distances result in low spin six coordinate octahedral complexes.

Synthesis and structural and magnetic characterization of discrete phenolato and imidazolate bridged Gd(III)–M(II) [M=Cu, Ni] dinuclear complexes

Three dinuclear complexes formed by the reaction of Gd(hfa)3 (hfa is hexafluoroacetylacetonate) with Schiff base complexes of Cu(II) and Ni(II) have been synthesized and characterized. The crystal structures of the complexes [Gd(hfa)3M(prpen)] {MCu(II (1)), Ni(II) (2)} are reported. (H2prpen is the Schiff base derived from the condensation of 2 equiv. of 2-hydroxypropiophenone and 1 equiv. of ethylenediamine.) Both 1 and 2 are discrete dinuclear complexes consisting of an eight coordinate Gd atom which is bridged to four coordinate M(II) via both phenolate oxygen atoms of the prpen ligand. The crystal structure shows there is no tendency toward dimerization between adjacent Cu(II) Schiff base units in 1. Cryomagnetic measurements show a ferromagnetic interaction between Gd(III) and Cu(II) in 1 as predicted by theory with J 1.91 cm 1 . The reaction of Gd(hfa)3 with Ni(L) (H2L is the Schiff base derived from the condensation of 1 equiv. each of 5-chlorobenzophenone, 1,2-diaminobenzene, and 5-methyl-4-imidazolecarboxaldehyde) produced Gd(hfa)3Ni(L) (3) in which imidazolate is available to bridge Gd(III) and Ni(II).

Relative axial ligand orientation in bis(imidazole)iron(II) porphyrinates: are "picket fence" derivatives different?

The synthesis of three new bis(imidazole)-ligated iron(II) picket fence porphyrin derivatives, [Fe(TpivPP)(1-RIm) 2] 1-RIm = 1-methyl-, 1-ethyl-, or 1-vinylimidazole) are reported. X-ray structure determinations reveal that the steric requirements of the four alpha,alpha,alpha,alpha-o-pivalamidophenyl groups lead to very restricted rotation of the imidazole ligand on the picket side of the porphyrin plane; the crowding leads to an imidazole plane orientation eclipsing an iron-porphyrin nitrogen bond. An unusual feature for these diamagnetic iron(II) species is that all three derivatives have the two axial ligands with a relative perpendicular orientation; the dihedral angles between the two imidazole planes are 77.2 degrees , 62.4 degrees , and 78.5 degrees . All three derivatives have nearly planar porphyrin cores. Mössbauer spectroscopic characterization shows that all three derivatives have quadrupole splitting constants around 1.00 mm/s at 100K.

Structure and Bonding in Heme–Nitrosyl Complexes and Implications for Biology

This review summarizes our current understanding of the geometric and electronic structures of ferrous and ferric heme–nitrosyls, which are of key importance for the biological functions and transformations of NO. In-depth correlations are made between these properties and the reactivities of these species. Here, a focus is put on the discoveries that have been made in the last 10 years, but previous findings are also included as necessary. Besides this, ferrous heme–nitroxyl complexes are also considered, which have become of increasing interest recently due to their roles as intermediates in NO and multiheme nitrite reductases, and because of the potential role of HNO as a signaling molecule in mammals. In recent years, computational methods have received more attention as a means of investigating enzyme reaction mechanisms, and some important findings from these theoretical studies are also highlighted in this chapter.