Wolfgang Fritsche

Effects of ryegrass on biodegradation of hydrocarbons in soil

The effects of growing ryegrass (Lolium perenne L.) on the biodegradation of hydrocarbons was studied in laboratory scale soil columns. Degradation of hydrocarbons as well as bacterial numbers, soil respiration rates and soil dehydrogenase activities were determined. In the rhizosphere soil system, aliphatic hydrocarbons disappeared faster than in unvegetated columns. Abiotic loss by evaporation was of minor significance. Elimination of pollutants was accompanied by an increase in microbial numbers and activities. The microbial plate counts and soil respiration rates were substantially higher in the rhizosphere than in the bulk soil. The results indicate that biodegradation of hydrocarbons in the rhizosphere is stimulated by plant roots.

Patterns of ligninolytic enzymes in Trametes versicolor. Distribution of extra- and intracellular enzyme activities during cultivation on glucose, wheat straw and beech wood

Trametes versicolor was shown to produce extracellular laccase during surface cultivation on glucose, wheat straw and beech wood. Growth on both wheat straw and beech wood led to an increase as high as 3.5-fold in extracellular laccase activity, in comparison with growth on glucose. The corresponding yields in fungal biomass reached only about 20% of the value obtained on glucose. Manganese peroxidase activity␣appeared during growth on wheat straw and beech wood. Mycelia grown on glucose, wheat straw and beech wood also showed intracellular laccase activities, monitored with 2,6-dimethoxyphenol, 2,2′-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid), 4-hydroxy-3,5-dimethoxybenzaldehyde azine (syringaldazine) and 3,4-dihydroxyphenylalanine (l-DOPA). Assaying intracellular laccase with 2,6-dimethoxyphenol, syringaldazine and l-DOPA showed the maximum oxidation rates to be at pH values different from those producing maximum oxidation rates with extracellular laccase. In each case most of the total laccase activity was recovered from the culture filtrates. Growth on wheat straw and beech wood led to increased values for both extra- and intracellular laccase activities, based on fungal dry weight, in comparison with growth on glucose.

Screening for fungi intensively mineralizing 2,4,6-trinitrotoluene.

Abstract Within a screening program, 91 fungal strains belonging to 32 genera of different ecological and taxonomic groups (wood- and litter-decaying basidiomycetes, saprophytic micromycetes) were tested for their ability to metabolize and mineralize 2,4,6-trinitrotoluene (TNT). All these strains metabolized TNT rapidly by forming monoaminodinitrotoluenes (AmDNT). Micromycetes produced higher amounts of AmDNT than did wood- and litter-decaying basidiomycetes. A significant mineralization of [14C]TNT was only observed for certain wood- and litter-decaying basidiomycetes. The most active strains, Clitocybula dusenii TMb12 and Stropharia rugosa-annulata DSM11372 mineralized 42 % and 36 % respectively of the initial added [14C]TNT (100 μM corresponding to 4.75 μCi/l) to 14CO2 within 64 days. Micromycetes (deuteromycetes, ascomycetes, zygomycetes) proved to be unable to mineralize [14C]TNT significantly.

Oxidative decomposition of malonic acid as basis for the action of manganese peroxidase in the absence of hydrogen peroxide

Manganese peroxidase (MnP) from the ligninolytic basidiomycetes Phlebia radiata and Nematoloma frowardii was found to decompose malonate oxidatively in the absence of H2O2 in a reaction system consisting of the enzyme, sodium malonate and MnCl2. The enzymatic oxidation resulted in a substantial decrease in malonate concentration and the formation of CO2, oxalate, glyoxylate and formate. Simultaneously with the decomposition of malonate, Mn(II) was oxidized to Mn(III) leading to high transient concentrations of the latter. MnP action in the absence of H2O2 started slowly after a lag period of 3 h. The lag period was considerably shortened after a single addition of Mn(III). Superoxide dismutase and catalase inhibited the enzymatic reaction partly, ascorbate completely. ESR studies demonstrated the formation of a carbon‐centered radical during the course of the reaction. We propose that the latter generates peroxides that can be used by MnP to oxidize Mn(II) to Mn(III).

Degradation of lignite (low-rank coal) by ligninolytic basidiomycetes and their manganese peroxidase system

Abstract Ligninolytic basidiomycetes (wood and leaf-litter-decaying fungi) have the ability to degrade low-rank coal (lignite). Extracellular manganese peroxidase is the crucial enzyme in the depolymerization process of both coal-derived humic substances and native coal. The depolymerization of coal by Mn peroxidase is catalysed via chelated Mn(III) acting as a diffusible mediator with a high redox potential and can be enhanced in the presence of additional mediating agents (e.g. glutathione). The depolymerization process results in the formation of a complex mixture of lower-molecular-mass fulvic-acid-like compounds. Experiments using a synthetic 14C-labeled humic acid demonstrated that the Mn peroxidase-catalyzed depolymerization of humic substances was accompanied by a substantial release of carbon dioxide (17%–50% of the initially added radioactivity was released as 14CO2). Mn peroxidase was found to be a highly stable enzyme that remained active for several weeks under reaction conditions in a liquid reaction mixture and even persisted in sterile and native soil from an opencast mining area for some days.

Metabolism of phenol, chloro- and nitrophenols by the Penicillium strain Bi 7/2 isolated from a contaminated soil

The Penicillium strain Bi 7/2 able to grow on phenol as sole source of carbon and energy was isolated from a contaminated soil in Bitterfeld (East Germany). The strain is adapted to high phenol concentrations. Spores germinated still at a phenol concentration of 1.5 g/l. Phenol is degraded by the ortho-pathway with catechol as first intermediary product. The Penicillium strain metabolizes 4-, 3- and 2-chlorophenol with decreasing rates with phenol or glucose as cosubstrate. In the case of 4-chlorophenol 4-chlorocatechol was detected as intermediary product, further degraded as indicated by release of about 35% of the bound chlorine of the aromatic molecule. The strain also cometabolically metabolizes 4-, 3- and 2-nitrophenol. The final product of 3- and 4-nitrophenol is 4-nitrocatechol.

Molecular characterization of field isolates of Pseudomonas syringae pv. glycinea differing in coronatine production

Coronatine-producing and non-producing strains of Pseudomonas syringae pv. glycinea have been examined. We found a connection between copper resistance and synthesis of coronatine. Published data implied that these properties may be encoded on different plasmids. Production of coronatine and copper resistance were also found to be correlated for pv. glycinea in 19 field-isolates from leaf spots of plants in a soybean field and in 28 strains of a bacterial culture collection. Genomic diversity within pv. glycinea was investigated by plasmid profiling, DNA hybridization studies and PCR analysis. All strains unable to produce coronatine (cor-) were sensitive to copper ions and showed no homology to DNA from plasmid pSAY1, which carries a gene cluster for steps in coronatine production. In addition, cor- strains could be distinguished from coronatine-producing strains by a single unique band when amplified by random primer PCR. Plasmid profiles of strains isolated from field-populations during 1983, 1985 and 1990 showed that coronatine-producing and non-producing strains were present. The plasmid patterns also varied in 28 strains examined from a culture collection. No correlation between plasmid patterns and race specificity was observed. Cosmid pSAY1 proved to be an effective probe for detection of the coronatine synthesis genes and also revealed polymorphisms in coronatine producing strains of pv. glycinea.

Fungal attack on coal II. Solubilization of low-rank coal by filamentous fungi

Abstract The solubilization of low-rank coal by fungi is not accompanied by its depolymerization, which was proven by several screening programs. A total number of 728 fungal strains were yet tested for solubilizing a German low-rank coal (lignite). The coal were used oxidatively pretreated (3% H 2 O 2 ) and natively. During the first screening, the nitrogen content of the media were reduced to select fungi, which solubilize coal under nitrogen-limited conditions. Among 480 micromycetous fungi tested, at least ten strains were able to solubilize native low-rank coal pieces on a nitrogen-reduced agar-medium. They all belong to the conidiospores forming deuteromycetes (molds). Under ‘solubilizing’ conditions, only two of these ten strains showed weak extracellular activities (oxidases, peroxidases) toward 2,2′-azinobis(3-ethylbenzthiazoline-6-sulphonate) [ABTS]. In a second screening, 256 wood and litter decaying basidiomycetes, above all white-rot fungi, were tested for their ability to solubilize low-rank coal under ligninolytic conditions: not any strain was able to form black coal droplets or conspicuous diffusion areas. By using a nitrogen-rich medium, a few basidiomycetes showed also coal solubilizing activities, however, their ligninolytic enzymes were inhibited. The ‘typical’ solubilization of low-rank coal (formation of black liquids from solid coal particles) by molds depends mainly on the nitrogen content of the medium (resulting in higher pH values) as well as on the oxidation grade of coal (e.g. H 2 O 2 -pretreatment). Extracellular oxidases and peroxidases, both ligninolytic and nonligninolytic ones, seem to play a minor, (or not any), role for this process.

Mineralization of synthetic humic substances by manganese peroxidase from the white-rot fungus Nematoloma frowardii

Abstract A manganese peroxidase preparation from the white-rot fungus Nematoloma frowardii was found to be capable of releasing up to 17% 14CO2 from 14C-labelled synthetic humic substances. The latter were prepared from [U-14C]catechol by spontaneous oxidative polymerization or laccase-catalysed polymerization. The ex-tent of humic substance mineralization was considerably enhanced in the presence of the thiol mediator glutathione (up to 50%). Besides the evolution of 14CO2, the treatment of humic substances with Mn peroxidase resulted in the formation of lower-molecular-mass products. Analysis of residual radioactivity by gel-permeation chromatography demonstrated that the predominant molecular masses of the initial humic substances ranged between 2 kDa and 6 kDa; after treatment with Mn peroxidase, they were reduced to 0.5–2 kDa. The extracellular depolymerization and mineralization of humic substances by the Mn peroxidase system may play an important role in humus turnover of habitats that are rich in basidiomycetous fungi.

Mineralization of 2-amino-4,6-dinitrotoluene by manganese peroxidase of the white-rot fungus Nematoloma frowardii

A manganese peroxidase preparation of the white-rot fungus Nematoloma frowardii mineralized uniformly ring-labeled C-2-amino-4,6-dinitrotoluene directly to CO . In the cell-free system, a release of 52% CO was demonstrated in the presence of reduced glutathione as secondary thiol mediator. This is the first description of the direct enzymatic combustion of an aromatic compound by an extracellular enzyme of the ligninolytic system.