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Featured researches published by Y. Abbott.


Applied and Environmental Microbiology | 2011

Characterization of Multidrug-Resistant Escherichia coli Isolates from Animals Presenting at a University Veterinary Hospital

Maria Karczmarczyk; Y. Abbott; Ciara Walsh; Nola Leonard; Séamus Fanning

ABSTRACT In this study, we examined molecular mechanisms associated with multidrug resistance (MDR) in a collection of Escherichia coli isolates recovered from hospitalized animals in Ireland. PCR and DNA sequencing were used to identify genes associated with resistance. Class 1 integrons were prevalent (94.6%) and contained gene cassettes recognized previously and implicated mainly in resistance to aminoglycosides, β-lactams, and trimethoprim (aadA1, dfrA1-aadA1, dfrA17-aadA5, dfrA12-orfF-aadA2, bla OXA-30-aadA1, aacC1-orf1-orf2-aadA1, dfr7). Class 2 integrons (13.5%) contained the dfrA1-sat1-aadA1 gene array. The most frequently occurring phenotypes included resistance to ampicillin (97.3%), chloramphenicol (75.4%), florfenicol (40.5%), gentamicin (54%), neomycin (43.2%), streptomycin (97.3%), sulfonamide (98.6%), and tetracycline (100%). The associated resistance determinants detected included bla TEM, cat, floR, aadB, aphA1, strA-strB, sul2, and tet(B), respectively. The bla CTX-M-2 gene, encoding an extended-spectrum β-lactamase (ESβL), and bla CMY-2, encoding an AmpC-like enzyme, were identified in 8 and 18 isolates, respectively. The mobility of the resistance genes was demonstrated using conjugation assays with a representative selection of isolates. High-molecular-weight plasmids were found to be responsible for resistance to multiple antimicrobial compounds. The study demonstrated that animal-associated commensal E. coli isolates possess a diverse repertoire of transferable genetic determinants. Emergence of ESβLs and AmpC-like enzymes is particularly significant. To our knowledge, the bla CTX-M-2 gene has not previously been reported in Ireland.


Veterinary Record | 2006

Methicillin-resistant Staphylococcus aureus isolated from a veterinary surgeon and five dogs in one practice

F. C. Leonard; Y. Abbott; Rossney A; P. J. Quinn; O'Mahony R; Bryan Markey

Methicillin-resistant Staphylococcus aureus (MRSA) was isolated from five dogs with wound discharges after surgical procedures at a veterinary practice, and MRSA with similar molecular and phenotypic characteristics was isolated from the nares of one veterinary surgeon in the practice. The pulsed-field gel electrophoresis patterns of all the isolates were indistinguishable from each other and from the most common human isolates of MRSA in Ireland.


Journal of Medical Microbiology | 2010

Zoonotic transmission of Streptococcus equi subsp. zooepidemicus from a dog to a handler.

Y. Abbott; Els Acke; S. Khan; E. G. Muldoon; Bryan Markey; M. Pinilla; F. C. Leonard; K. Steward; Andrew S. Waller

This is, to the best of our knowledge, the first case report to describe the apparent transmission of Streptococcus equi subsp. zooepidemicus from an infected dog to a handler who subsequently developed severe systemic infection. Characterization of the haemolytic streptococci isolated from both the patient and the dog, by phenotypic and molecular analysis, confirmed the canine and human isolates were identical.


Veterinary Record | 2010

Isolation rates of meticillin-resistant Staphylococcus aureus in dogs, cats and horses in Ireland

Y. Abbott; B. Leggett; Rossney A; F. C. Leonard; Bryan Markey

A retrospective analysis and prospective surveillance study were conducted to determine isolation rates of meticillin-resistant Staphylococcus aureus (MRSA) in dogs, cats and horses in Ireland. Clinical samples that had been submitted to University College Dublin (UCD) for routine microbiological examination over a four-year period (2003 to 2006) were analysed in the retrospective analysis, which included clinical samples from 3866 animals. In the prospective surveillance study, samples from healthy animals presenting for elective surgery as well as from animals with a clinical presentation suggestive of MRSA infection were investigated. Animals attending 30 veterinary practices throughout Ireland and a similar population of animals presented to UCD were studied. The isolation rates for animals in the retrospective study were 1.1 per cent (32 of 2864) for dogs, 0.7 per cent (four of 619) for cats and 5.2 per cent (20 of 383) for horses. The overall isolation rate of MRSA was 1.4 per cent (56 of 3866). Isolation rates for healthy animals in the prospective study were 0.4 per cent (one of 286) for dogs and 1.7 per cent (four of 236) for horses; MRSA was not isolated from cats (0 of 47). Isolation rates for animals suspected of being infected with MRSA were 8.1 per cent (14 of 173) for dogs and 4.6 per cent (three of 65) for horses; MRSA was not isolated from cats (0 of 47).


Veterinary Record | 2010

Toxigenic Corynebacterium diphtheriae isolated from a wound in a horse

B. Leggett; A De Zoysa; Y. Abbott; Nola Leonard; Bryan Markey; Androulla Efstratiou

Corynebacterium species are a widely distributed group of bacteria, typically found in the environment in soil, and on the skin and mucous membranes of human beings and animals. Corynebacteria have also been documented to survive for long periods of time on objects that have been touched by infected


Epidemiology and Infection | 2010

Detection of three distinct genetic lineages in methicillin-resistant Staphylococcus aureus (MRSA) isolates from animals and veterinary personnel.

Y. Abbott; F. C. Leonard; Bryan Markey

This study involved the phenotypic and molecular characterization of a population of methicillin-resistant Staphylococcus aureus isolates from animals and from veterinary personnel in Ireland. Isolates from 77 animals (dogs, n=44; cats, n=4; horses, n=29) and from 28 veterinary personnel were characterized using their antimicrobial resistance profiles and pulsed-field gel electrophoresis patterns. In addition, a representative number of these isolates (n=52) were further analysed using spa-typing techniques. The results obtained identified the presence of three distinct clonal complexes, CC5, CC8 and CC22, in both animal and human isolates. Two of these clonal complexes, CC8 and CC22, respectively, have been previously described in animals in Ireland but the presence of the third complex CC5 is a novel finding. The significance of this development, in relation to human and animal healthcare, is discussed.


Veterinary Journal | 2011

A study of the prevalence of methicillin-resistant Staphylococcus aureus in pigs and in personnel involved in the pig industry in Ireland.

Marianne Horgan; Y. Abbott; Peadar G. Lawlor; Angela Rossney; Aidan Coffey; Gerald F. Fitzgerald; Olivia McAuliffe; R. Paul Ross

To evaluate the prevalence of methicillin-resistant Staphylococcus aureus (MRSA) in the pig population in Ireland, nasal swabbing was employed in three abattoirs to screen 440 pigs from 41 geographically distributed farms. One hundred individuals involved in the pig industry were also nasally screened. No MRSA isolates were recovered from the pigs and only two of the humans tested were identified as MRSA carriers. Importantly, MRSA was not obtained from pig producers, veterinarians or abattoir employees, but was isolated from individuals working in the wider pig industry. Multi-locus sequence typing revealed that these isolates belonged to sequence types (ST) ST22 and ST1307; the latter is a previously unreported single locus variant of ST5. Five dust samples from each of the three slaughterhouses were culture-negative for MRSA. These results indicate that porcine colonisation by MRSA, and in particular the animal-related strain MRSA-ST398, was not common in Ireland during the period of study.


Journal of Small Animal Practice | 2009

High‐level gentamicin‐resistant and vancomycin‐resistant Enterococcus faecium isolated from a wound in a dog

Y. Abbott; B. M. Kirby; M. Karczmarczyk; Bryan Markey; F. C. Leonard; S. Fitzgerald

This report describes the first clinical case, in Europe, of a high-level gentamicin-resistant and vancomycin-resistant Enterococcus faecium infection in a dog. The aim of this report is to alert the veterinary profession to high-level gentamicin-resistant and vancomycin-resistant Enterococcus faecium in companion animal patients. Multi-drug resistant strains of this pathogen are the cause of considerable problems in human hospitals and for community healthcare professionals worldwide. The potential for a similar impact within veterinary medicine is discussed.


Veterinary Record | 2010

Isolation of Streptococcus zooepidemicus from three dogs in close contact with horses.

Els Acke; Y. Abbott; M. Pinilla; Bryan Markey; F. C. Leonard

\ Streptococcus equi subspecies zooepidemicus ( S zooepidemicus ) is commonly isolated from the skin and upper respiratory tract mucosa of horses. It is also the most frequently isolated opportunistic pathogen of horses, and a significant cause of disease ([Anzai and others 2000][1], [Timoney 2004][


Veterinary Record | 2007

Persistence of MRSA infection

Y. Abbott; Nola Leonard; Bryan Markey; Rossney A; J. Dunne

SIR, — In 2001, the Diagnostic Bacteriology Laboratory at the University Veterinary Hospital, University College Dublin, Ireland, began an active surveil-lance programme for the detection of meticillin-resistant Staphylococcus aureus (mrsa). To date, mrsa-associated infection has been diagnosed in

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Bryan Markey

University College Dublin

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F. C. Leonard

University College Dublin

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Nola Leonard

University College Dublin

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Séamus Fanning

University College Dublin

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P. J. Quinn

University College Dublin

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A. Burns

University College Dublin

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B. Leggett

University College Dublin

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Els Acke

University College Dublin

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Hanne Jahns

University College Dublin

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James Gibbons

University College Dublin

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