Yann Cobigo
University of California, San Francisco
Network
Latest external collaboration on country level. Dive into details by clicking on the dots.
Publication
Featured researches published by Yann Cobigo.
Journal of Acquired Immune Deficiency Syndromes | 2017
Katherine Clifford; Vishal Samboju; Yann Cobigo; Benedetta Milanini; Gabriel Marx; Joanna Hellmuth; Howard J. Rosen; Joel H. Kramer; Isabel E. Allen; Victor Valcour
Background: Current HIV treatments are successful at suppressing plasma HIV RNA to undetectable levels for most adherent patients. Yet, emerging evidence suggests that viral suppression will inadequately control inflammation and mitigate risk for progressive brain injury. We sought to quantify differences in longitudinal brain atrophy rates among older virally suppressed HIV-infected participants compared with that of healthy aging participants. Methods: We examined longitudinal structural brain magnetic resonance imaging atrophy rates using region of interest assessments and voxel-wise tensor-based morphometry in HIV-infected participants older than 60 years (n = 38) compared with age-matched HIV-uninfected healthy and cognitively normal controls (n = 24). Results: The mean age of participants was 63 years, the mean estimated duration of infection was 21 years, and the median duration of documented viral suppression was 3.2 years. Average proximal and nadir CD4 counts were 550 and 166, respectively; 15/38 (39%) met criteria for HIV-associated neurocognitive disorder. In models adjusting for age and sex, HIV serostatus was associated with more rapid average annualized rates of atrophy in the cerebellum (0.42% vs. 0.02%, P = 0.016), caudate (0.74% vs. 0.03%, P = 0.012), frontal lobe (0.48% vs. 0.01%, P = 0.034), total cortical gray matter (0.65% vs. 0.16%, P = 0.027), brainstem (0.31% vs. 0.01%, P = 0.026), and pallidum (0.73% vs. 0.39%, P = 0.046). Among those with HIV, atrophy rates did not differ statistically by cognitive status. Conclusions: Despite persistent control of plasma viremia, these older HIV-infected participants demonstrate more rapid progressive brain atrophy when compared with healthy aging. Either HIV or other factors that differ between older HIV-infected participants and healthy controls could be responsible for these differences.
The Journal of Neuroscience | 2018
Adam M. Staffaroni; Jesse A. Brown; Kaitlin B. Casaletto; Fanny Elahi; Jersey Deng; John Neuhaus; Yann Cobigo; Paige S. Mumford; Samantha Walters; Rowan Saloner; Anna Karydas; Giovanni Coppola; Howie Rosen; Bruce L. Miller; William W. Seeley; Joel H. Kramer
The default mode network (DMN) supports memory functioning and may be sensitive to preclinical Alzheimers pathology. Little is known, however, about the longitudinal trajectory of this networks intrinsic functional connectivity (FC). In this study, we evaluated longitudinal FC in 111 cognitively normal older human adults (ages 49–87, 46 women/65 men), 92 of whom had at least three task-free fMRI scans (n = 353 total scans). Whole-brain FC and three DMN subnetworks were assessed: (1) within-DMN, (2) between anterior and posterior DMN, and (3) between medial temporal lobe network and posterior DMN. Linear mixed-effects models demonstrated significant baseline age × time interactions, indicating a nonlinear trajectory. There was a trend toward increasing FC between ages 50–66 and significantly accelerating declines after age 74. A similar interaction was observed for whole-brain FC. APOE status did not predict baseline connectivity or change in connectivity. After adjusting for network volume, changes in within-DMN connectivity were specifically associated with changes in episodic memory and processing speed but not working memory or executive functions. The relationship with processing speed was attenuated after covarying for white matter hyperintensities (WMH) and whole-brain FC, whereas within-DMN connectivity remained associated with memory above and beyond WMH and whole-brain FC. Whole-brain and DMN FC exhibit a nonlinear trajectory, with more rapid declines in older age and possibly increases in connectivity early in the aging process. Within-DMN connectivity is a marker of episodic memory performance even among cognitively healthy older adults. SIGNIFICANCE STATEMENT Default mode network and whole-brain connectivity, measured using task-free fMRI, changed nonlinearly as a function of age, with some suggestion of early increases in connectivity. For the first time, longitudinal changes in DMN connectivity were shown to correlate with changes in episodic memory, whereas volume changes in relevant brain regions did not. This relationship was not accounted for by white matter hyperintensities or mean whole-brain connectivity. Functional connectivity may be an early biomarker of changes in aging but should be used with caution given its nonmonotonic nature, which could complicate interpretation. Future studies investigating longitudinal network changes should consider whole-brain changes in connectivity.
NeuroImage: Clinical | 2017
Fanny Elahi; Gabe Marx; Yann Cobigo; Adam M. Staffaroni; John Kornak; Duygu Tosun; Adam L. Boxer; Joel H. Kramer; Bruce L. Miller; Howard J. Rosen
Background Degradation of white matter microstructure has been demonstrated in frontotemporal lobar degeneration (FTLD) and Alzheimers disease (AD). In preparation for clinical trials, ongoing studies are investigating the utility of longitudinal brain imaging for quantification of disease progression. To date only one study has examined sample size calculations based on longitudinal changes in white matter integrity in FTLD. Objective To quantify longitudinal changes in white matter microstructural integrity in the three canonical subtypes of frontotemporal dementia (FTD) and AD using diffusion tensor imaging (DTI). Methods 60 patients with clinical diagnoses of FTD, including 27 with behavioral variant frontotemporal dementia (bvFTD), 14 with non-fluent variant primary progressive aphasia (nfvPPA), and 19 with semantic variant PPA (svPPA), as well as 19 patients with AD and 69 healthy controls were studied. We used a voxel-wise approach to calculate annual rate of change in fractional anisotropy (FA) and mean diffusivity (MD) in each group using two time points approximately one year apart. Mean rates of change in FA and MD in 48 atlas-based regions-of-interest, as well as global measures of cognitive function were used to calculate sample sizes for clinical trials (80% power, alpha of 5%). Results All FTD groups showed statistically significant baseline and longitudinal white matter degeneration, with predominant involvement of frontal tracts in the bvFTD group, frontal and temporal tracts in the PPA groups and posterior tracts in the AD group. Longitudinal change in MD yielded a larger number of regions with sample sizes below 100 participants per therapeutic arm in comparison with FA. SvPPA had the smallest sample size based on change in MD in the fornix (n = 41 participants per study arm to detect a 40% effect of drug), and nfvPPA and AD had their smallest sample sizes based on rate of change in MD within the left superior longitudinal fasciculus (n = 49 for nfvPPA, and n = 23 for AD). BvFTD generally showed the largest sample size estimates (minimum n = 140 based on MD in the corpus callosum). The corpus callosum appeared to be the best region for a potential study that would include all FTD subtypes. Change in global measure of functional status (CDR box score) yielded the smallest sample size for bvFTD (n = 71), but clinical measures were inferior to white matter change for the other groups. Conclusions All three of the canonical subtypes of FTD are associated with significant change in white matter integrity over one year. These changes are consistent enough that drug effects in future clinical trials could be detected with relatively small numbers of participants. While there are some differences in regions of change across groups, the genu of the corpus callosum is a region that could be used to track progression in studies that include all subtypes.
NeuroImage: Clinical | 2018
Vishal Samboju; Carissa L. Philippi; Phillip Chan; Yann Cobigo; James L. K. Fletcher; Merlin L. Robb; Joanna Hellmuth; Khunthalee Benjapornpong; Netsiri Dumrongpisutikul; Mantana Pothisri; Robert H. Paul; Jintanat Ananworanich; Serena Spudich; Victor Valcour; Rv protocol teams
Background HIV RNA is identified in cerebrospinal fluid (CSF) within eight days of estimated viral exposure. Neurological findings and impaired neuropsychological testing performance are documented in a subset of individuals with acute HIV infection (AHI). The purpose of this study was to determine whether microstructural white matter and resting-state functional connectivity (rsFC) are disrupted in AHI. Methods We examined 49 AHI (100% male; mean age = 30 ± SD 9.9) and 23 HIV-uninfected Thai participants (78% male; age = 30 ± 5.5) with diffusion tensor imaging (DTI) and rsFC acquired at 3 Tesla, and four neuropsychological tests (summarized as NPZ-4). MRI for the AHI group was performed prior to combination antiretroviral treatment (ART) in 26 participants and on average two days (range:1–5) after ART in 23 participants. Fractional anisotropy (FA), mean (MD), axial (AD), and radial diffusivity (RD) were quantified for DTI. Seed-based voxelwise rsFC analyses were completed for the default mode (DMN), fronto-parietal, and salience and 6 subcortical networks. rsFC and DTI analyses were corrected for family-wise error, with voxelwise comparisons completed using t-tests. Group-specific voxelwise regressions were conducted to examine relationships between imaging indices, HIV disease variables, and treatment status. Results The AHI group had a mean (SD) CD4 count of 421(234) cells/mm3 plasma HIV RNA of 6.07(1.1) log10 copies/mL and estimated duration of infection of 20(5.5) days. Differences between AHI and CO groups did not meet statistical significance for DTI metrics. Within the AHI group, voxelwise analyses revealed associations between brief exposure to ART and higher FA and lower RD and MD bilaterally in the corpus callosum, corona radiata, and superior longitudinal fasciculus (p < 0.05). Diffusion indices were unrelated to clinical variables or NPZ-4. The AHI group had reduced rsFC between left parahippocampal cortex (PHC) of the DMN and left middle frontal gyrus compared to CO (p < 0.002). Within AHI, ART status was unrelated to rsFC. However, higher CD4 cell count associated with increased rsFC for the right lateral parietal and PHC seeds in the DMN. Direct associations were noted between NPZ-4 correspond to higher rsFC of the bilateral caudate seed (p < 0.002). Conclusions Study findings reveal minimal disruption to structural and functional brain integrity in the earliest stages of HIV. Longitudinal studies are needed to determine if treatment with ART initiated in AHI is sufficient to prevent the evolution of brain dysfunction identified in chronically infected individuals.
Annals of clinical and translational neurology | 2018
Peter A. Ljubenkov; Adam M. Staffaroni; Julio C. Rojas; Isabel E. Allen; Ping Wang; Hilary W. Heuer; Anna Karydas; John Kornak; Yann Cobigo; William W. Seeley; Lea T. Grinberg; Salvatore Spina; Anne M. Fagan; Gina Jerome; David S. Knopman; B. F. Boeve; Bradford C. Dickerson; Joel H. Kramer; Bruce L. Miller; Adam L. Boxer; Howard J. Rosen
The prognostic value of cerebrospinal fluid neurofilament light chain, total tau, phosphorylated tau181, and amyloid beta1‐42 was examined in frontotemporal dementia subtypes.
Alzheimers & Dementia | 2018
Fanny Elahi; Marie Altendahl; Teresa J. Filshtein; Kaitlin B. Casaletto; Adam M. Staffaroni; Wilfredo Rivera Contreras; Anna Karydas; Yann Cobigo; Evan Fletcher; Baljeet Singh; Oliver Martinez; Howard J. Rosen; Jason D Hinman; Katerina Akassoglou; M. Maria Glymour; Charles DeCarli; Edward J. Goetzl; Joel H. Kramer
P2-245 ENDOTHELIAL-DERIVED EXOSOME BIOMARKERS SUGGESTACTIVATION OF INNATE IMMUNITY IN SUBCLINICAL CEREBROVASCULAR DISEASE Fanny Elahi, Marie Altendahl, Teresa J. Filshtein, Kaitlin Casaletto, Adam M. Staffaroni, Wilfredo Rivera Contreras, Anna M. Karydas, Yann Cobigo, Evan Fletcher, Baljeet Singh, Oliver Martinez, Howard J. Rosen, Jason Hinman, Katerina Akassoglou, Maria Glymour, Charlie S. DeCarli, Edward J. Goetzl, Joel H. Kramer, University of California San Francisco, San Francisco, CA, USA; University of California, Davis, Davis, CA, USA; Memory and Aging Center, UCSFWeill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA, USA; University of California, San Francisco, San Francisco, CA, USA; University of California at Davis, Davis, CA, USA; University of California Los Angeles, Los Angeles, CA, USA; University of California San Francisco, San Francisco, CA, USA; University of California San Francisco (UCSF), San Francisco, CA, USA. Contact e-mail: [email protected]
Neurology | 2018
Fanny Elahi; Kaitlin B. Casaletto; Adam M. Staffaroni; John Neuhaus; Yann Cobigo; Emily P. Fox; Samantha Walters; Marie Altendahl; Ryan Fitch; Anna Karydas; Jason D Hinman; Charles DeCarli; Adam L. Boxer; Gil D. Rabinovici; Howard J. Rosen; Bruce L. Miller; Joel H. Kramer
Neurology | 2018
Salvatore Spina; Adam M. Staffaroni; Luke W. Bonham; Nicholas Olney; Suneth Attygalle; Yann Cobigo; K. C. Chang; Richard J. Binney; Jennifer S. Yokoyama; John Kornak; Adam L. Boxer; Bruce L. Miller; Suzee E. Lee; Bradley F. Boeve; Howie Rosen
Alzheimers & Dementia | 2018
Benedetta Milanini; Vishal Samboju; Yann Cobigo; Isabel E. Allen; Victor Valcour
Neurology | 2016
Gabriel Marx; Fanny Elahi; Jon Elofson; Yann Cobigo; Duygu Tosun; Norbert Schuff; Bruce L. Miller; Howard J. Rosen