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Featured researches published by Yanyan Geng.


The Journal of General Physiology | 2011

Low resistance, large dimension entrance to the inner cavity of BK channels determined by changing side-chain volume.

Yanyan Geng; Xiaowei Niu; Karl L. Magleby

Large-conductance Ca2+- and voltage-activated K+ (BK) channels have the largest conductance (250–300 pS) of all K+-selective channels. Yet, the contributions of the various parts of the ion conduction pathway to the conductance are not known. Here, we examine the contribution of the entrance to the inner cavity to the large conductance. Residues at E321/E324 on each of the four α subunits encircle the entrance to the inner cavity. To determine if 321/324 is accessible from the inner conduction pathway, we measured single-channel current amplitudes before and after exposure and wash of thiol reagents to the intracellular side of E321C and E324C channels. MPA− increased currents and MTSET+ decreased currents, with no difference between positions 321 and 324, indicating that side chains at 321/324 are accessible from the inner conduction pathway and have equivalent effects on conductance. For neutral amino acids, decreasing the size of the entrance to the inner cavity by substituting large side-chain amino acids at 321/324 decreased outward single-channel conductance, whereas increasing the size of the entrance with smaller side-chain substitutions had little effect. Reductions in outward conductance were negated by high [K+]i. Substitutions had little effect on inward conductance. Fitting plots of conductance versus side-chain volume with a model consisting of one variable and one fixed resistor in series indicated an effective diameter and length of the entrance to the inner cavity for wild-type channels of 17.7 and 5.6 Å, respectively, with the resistance of the entrance ∼7% of the total resistance of the conduction pathway. The estimated dimensions are consistent with the structure of MthK, an archaeal homologue to BK channels. Our observations suggest that BK channels have a low resistance, large entrance to the inner cavity, with the entrance being as large as necessary to not limit current, but not much larger.


Proceedings of the National Academy of Sciences of the United States of America | 2013

Properties of Slo1 K+ channels with and without the gating ring

Gonzalo Budelli; Yanyan Geng; Alice Butler; Karl L. Magleby; Lawrence Salkoff

Significance High-conductance Slo1 (BK) K+ channels are synergistically activated by Ca2+, voltage, Mg2+, and additional factors to modulate membrane excitability in many key physiological processes. Slo1 channels are of modular design with allosteric interactions between the core transmembrane modules and a large cytoplasmic gating ring module, providing a model system to study allosteric principles in channel gating and protein function. To examine the allosteric interactions, we developed constructs that replace the large gating ring module with short peptides and then characterized the altered properties of the gating. Our studies, which provide insight into functional and allosteric interactions between the core and the gating ring, may be useful in understanding the disease processes associated with Slo1-channel dysfunction. High-conductance Ca2+- and voltage-activated K+ (Slo1 or BK) channels (KCNMA1) play key roles in many physiological processes. The structure of the Slo1 channel has two functional domains, a core consisting of four voltage sensors controlling an ion-conducting pore, and a larger tail that forms an intracellular gating ring thought to confer Ca2+ and Mg2+ sensitivity as well as sensitivity to a host of other intracellular factors. Although the modular structure of the Slo1 channel is known, the functional properties of the core and the allosteric interactions between core and tail are poorly understood because it has not been possible to study the core in the absence of the gating ring. To address these questions, we developed constructs that allow functional cores of Slo1 channels to be expressed by replacing the 827-amino acid gating ring with short tails of either 74 or 11 amino acids. Recorded currents from these constructs reveals that the gating ring is not required for either expression or gating of the core. Voltage activation is retained after the gating ring is replaced, but all Ca2+- and Mg2+-dependent gating is lost. Replacing the gating ring also right-shifts the conductance-voltage relation, decreases mean open-channel and burst duration by about sixfold, and reduces apparent mean single-channel conductance by about 30%. These results show that the gating ring is not required for voltage activation but is required for Ca2+ and Mg2+ activation. They also suggest possible actions of the unliganded (passive) gating ring or added short tails on the core.


The Journal of General Physiology | 2010

Coupling and cooperativity in voltage activation of a limited-state BK channel gating in saturating Ca2+

Chris Shelley; Xiaowei Niu; Yanyan Geng; Karl L. Magleby

Voltage-dependent gating mechanisms of large conductance Ca2+ and voltage-activated (BK) channels were investigated using two-dimensional maximum likelihood analysis of single-channel open and closed intervals. To obtain sufficient data at negative as well as positive voltages, single-channel currents were recorded at saturating Ca2+ from BK channels mutated to remove the RCK1 Ca2+ and Mg2+ sensors. The saturating Ca2+ acting on the Ca2+ bowl sensors of the resulting BKB channels increased channel activity while driving the gating into a reduced number of states, simplifying the model. Five highly constrained idealized gating mechanisms based on extensions of the Monod-Wyman-Changeux model for allosteric proteins were examined. A 10-state model without coupling between the voltage sensors and the opening/closing transitions partially described the voltage dependence of Po but not the single-channel kinetics. With allowed coupling, the model gave improved descriptions of Po and approximated the single-channel kinetics; each activated voltage sensor increased the opening rate approximately an additional 23-fold while having little effect on the closing rate. Allowing cooperativity among voltage sensors further improved the description of the data: each activated voltage sensor increased the activation rate of the remaining voltage sensors approximately fourfold, with little effect on the deactivation rate. The coupling factor was decreased in models with cooperativity from ∼23 to ∼18. Whether the apparent cooperativity among voltage sensors arises from imposing highly idealized models or from actual cooperativity will require additional studies to resolve. For both cooperative and noncooperative models, allowing transitions to five additional brief (flicker) closed states further improved the description of the data. These observations show that the voltage-dependent single-channel kinetics of BKB channels can be approximated by highly idealized allosteric models in which voltage sensor movement increases Po mainly through an increase in channel opening rates, with limited effects on closing rates.


The Journal of General Physiology | 2011

Mg 2+ binding to open and closed states can activate BK channels provided that the voltage sensors are elevated

Ren Shiang Chen; Yanyan Geng; Karl L. Magleby

BK channels are activated by intracellular Ca2+ and Mg2+ as well as by depolarization. Such activation is possible because each of the four subunits has two high-affinity Ca2+ sites, one low-affinity Mg2+ site, and a voltage sensor. This study further investigates the mechanism of Mg2+ activation by using single-channel recording to determine separately the action of Mg2+ on the open and closed states of the channel. To limit Mg2+ action to the Mg2+ sites, the two high-affinity Ca2+ sites are disabled by mutation. When the voltage is stepped from negative holding potentials to +100 mV, we find that 10 mM Mg2+ decreases the mean closed latency to the first channel opening 2.1-fold, decreases the mean closed interval duration 8.7-fold, increases mean burst duration 10.1-fold, increases the number of openings per burst 4.4-fold, and increases mean open interval duration 2.3-fold. Hence, Mg2+ can bind to closed BK channels, increasing their opening rates, and to open BK channels, decreasing their closing rates. To explore the relationship between Mg2+ action and voltage sensor activation, we record single-channel activity in macropatches containing hundreds of channels. Open probability (Po) is dramatically increased by 10 mM Mg2+ when voltage sensors are activated with either depolarization or the mutation R210C. The increased Po arises from large decreases in mean closed interval durations and moderate increases in mean open interval durations. In contrast, 10 mM Mg2+ has no detectable effects on Po or interval durations when voltage sensors are deactivated with very negative potentials or the mutation R167E. These observations are consistent with a model in which Mg2+ can bind to and alter the gating of both closed and open states to increase Po, provided that one or more voltage sensors are activated.


Frontiers in Physiology | 2015

Single-channel kinetics of BK (Slo1) channels

Yanyan Geng; Karl L. Magleby

Single-channel kinetics has proven a powerful tool to reveal information about the gating mechanisms that control the opening and closing of ion channels. This introductory review focuses on the gating of large conductance Ca2+- and voltage-activated K+ (BK or Slo1) channels at the single-channel level. It starts with single-channel current records and progresses to presentation and analysis of single-channel data and the development of gating mechanisms in terms of discrete state Markov (DSM) models. The DSM models are formulated in terms of the tetrameric modular structure of BK channels, consisting of a central transmembrane pore-gate domain (PGD) attached to four surrounding transmembrane voltage sensing domains (VSD) and a large intracellular cytosolic domain (CTD), also referred to as the gating ring. The modular structure and data analysis shows that the Ca2+ and voltage dependent gating considered separately can each be approximated by 10-state two-tiered models with five closed states on the upper tier and five open states on the lower tier. The modular structure and joint Ca2+ and voltage dependent gating are consistent with a 50 state two-tiered model with 25 closed states on the upper tier and 25 open states on the lower tier. Adding an additional tier of brief closed (flicker states) to the 10-state or 50-state models improved the description of the gating. For fixed experimental conditions a channel would gate in only a subset of the potential number of states. The detected number of states and the correlations between adjacent interval durations are consistent with the tiered models. The examined models can account for the single-channel kinetics and the bursting behavior of gating. Ca2+ and voltage activate BK channels by predominantly increasing the effective opening rate of the channel with a smaller decrease in the effective closing rate. Ca2+ and depolarization thus activate by mainly destabilizing the closed states.


Journal of Biological Chemistry | 2017

A Genetic Variant of the Sperm-specific SLO3 K+ Channel has altered pH and Ca2+ sensitivities.

Yanyan Geng; Juan Ferreira; Victor Dzikunu; Alice Butler; Pascale Lybaert; Peng Yuan; Karl Kl Magleby; Lawrence Salkoff; Celia Cm Santi

To fertilize an oocyte, sperm must first undergo capacitation in which the sperm plasma membrane becomes hyperpolarized via activation of potassium (K+) channels and resultant K+ efflux. Sperm-specific SLO3 K+ channels are responsible for these membrane potential changes critical for fertilization in mouse sperm, and they are only sensitive to pHi. However, in human sperm, the major K+ conductance is both Ca2+- and pHi-sensitive. It has been debated whether Ca2+-sensitive SLO1 channels substitute for human SLO3 (hSLO3) in human sperm or whether human SLO3 channels have acquired Ca2+ sensitivity. Here we show that hSLO3 is rapidly evolving and reveal a natural structural variant with enhanced apparent Ca2+ and pH sensitivities. This variant allele (C382R) alters an amino acid side chain at a principal interface between the intramembrane-gated pore and the cytoplasmic gating ring of the channel. Because the gating ring contains sensors to intracellular factors such as pH and Ca2+, the effectiveness of transduction between the gating ring and the pore domain appears to be enhanced. Our results suggest that sperm-specific genes can evolve rapidly and that natural genetic variation may have led to a SLO3 variant that differs from wild type in both pH and intracellular Ca2+ sensitivities. Whether this physiological variation confers differences in fertility among males remains to be established.


The Journal of General Physiology | 2017

Deletion of cytosolic gating ring decreases gate and voltage sensor coupling in BK channels

Guohui Zhang; Yanyan Geng; Yakang Jin; Jingyi Shi; Kelli McFarland; Karl L. Magleby; Lawrence Salkoff; Jianmin Cui

Large conductance Ca2+-activated K+ channels (BK channels) gate open in response to both membrane voltage and intracellular Ca2+. The channel is formed by a central pore-gate domain (PGD), which spans the membrane, plus transmembrane voltage sensors and a cytoplasmic gating ring that acts as a Ca2+ sensor. How these voltage and Ca2+ sensors influence the common activation gate, and interact with each other, is unclear. A previous study showed that a BK channel core lacking the entire cytoplasmic gating ring (Core-MT) was devoid of Ca2+ activation but retained voltage sensitivity (Budelli et al. 2013. Proc. Natl. Acad. Sci. USA. http://dx.doi.org/10.1073/pnas.1313433110). In this study, we measure voltage sensor activation and pore opening in this Core-MT channel over a wide range of voltages. We record gating currents and find that voltage sensor activation in this truncated channel is similar to WT but that the coupling between voltage sensor activation and gating of the pore is reduced. These results suggest that the gating ring, in addition to being the Ca2+ sensor, enhances the effective coupling between voltage sensors and the PGD. We also find that removal of the gating ring alters modulation of the channels by the BK channel’s &bgr;1 and &bgr;2 subunits.


The Journal of General Physiology | 2013

Lack of negative slope in I-V plots for BK channels at positive potentials in the absence of intracellular blockers

Yanyan Geng; Xiaoyu Wang; Karl L. Magleby

Large-conductance, voltage- and Ca2+-activated K+ (BK) channels display near linear current–voltage (I-V) plots for voltages between −100 and +100 mV, with an increasing sublinearity for more positive potentials. As is the case for many types of channels, BK channels are blocked at positive potentials by intracellular Ca2+ and Mg2+. This fast block progressively reduces single-channel conductance with increasing voltage, giving rise to a negative slope in the I-V plots beyond about +120 mV, depending on the concentration of the blockers. In contrast to these observations of pronounced differences in the magnitudes and shapes of I-V plots in the absence and presence of intracellular blockers, Schroeder and Hansen (2007. J. Gen. Physiol. http://dx.doi.org/10.1085/jgp.200709802) have reported identical I-V plots in the absence and presence of blockers for BK channels, with both plots having reduced conductance and negative slopes, as expected for blockers. Schroeder and Hansen included both Ca2+ and Mg2+ in the intracellular solution rather than a single blocker, and they also studied BK channels expressed from α plus β1 subunits, whereas most previous studies used only α subunits. Although it seems unlikely that these experimental differences would account for the differences in findings between previous studies and those of Schroeder and Hansen, we repeated the experiments using BK channels comprised of α plus β1 subunits with joint application of 2.5 mM Ca2+ plus 2.5 mM Mg2+, as Schroeder and Hansen did. In contrast to the findings of Schroeder and Hansen of identical I-V plots, we found marked differences in the single-channel I-V plots in the absence and presence of blockers. Consistent with previous studies, we found near linear I-V plots in the absence of blockers and greatly reduced currents and negative slopes in the presence of blockers. Hence, studies of conductance mechanisms for BK channels should exclude intracellular Ca2+/Mg2+, as they can reduce conductance and induce negative slopes.


The Journal of General Physiology | 2015

Modal gating of endplate acetylcholine receptors: A proposed mechanism

Yanyan Geng; Karl L. Magleby

Decades ago as a beginning graduate student, one of us (K.L.M.) was studying short-term synaptic plasticity at the neuromuscular synapse. The responses were generally consistent from day to day, but there was some variability. At that time, K.L.M. naively thought that if it were possible to directly


Biophysical Journal | 2011

Voltage Sensor Deactivation Inhibits BK Channel Opening by Mg2

Ren-Shiang Chen; Yanyan Geng; Karl L. Magleby

Functional and structural studies suggest that intracellular Mg2+ activates BK channels through interaction with the voltage-sensing domain (Yang et al. 2007, 2008; Horrigan & Ma 2008; Yuan et al. 2010; Wu et al. 2010). To further explore the mechanism of activation of BK channels by Mg2+ through the low affinity E374/E399 Mg2+ sites located beneath the voltage sensors, we use single-channel analysis to study BK channels mutated to remove the high affinity Ca2+ sites. We find that 10 mM Mg2+ shortens the latency to first channel opening after a voltage jump to +100 mV from −100 mV, consistent with the hypothesis that Mg2+ can bind to the closed channel and shorten the latency. However, it is not clear whether the closed-channel binding occurs when the voltage sensors are deactivated (down) or activated (up). We therefore recorded single-channel activity in macro-patches held at constant −50 mV, where voltage sensors occasionally activate. Under this condition, 10 mM Mg2+ decreases mean closed duration and increases mean open duration. These effects are attenuated at −100 mV, and become negligible at −150 mV, where the voltage sensors are mainly deactivated. For BK channels modified to have deactivated voltage-sensors (R167E), 10 mM Mg2+ has little effect on mean closed and open durations at −50 mV. In contrast, for BK channels modified to have constitutively activated voltage sensors (R210C), 10 mM Mg2+ shortens the mean closed durations and lengthens the mean open durations at −200 mV. The above observations are consistent with a model in which voltage sensor deactivation inhibits BK channel opening by Mg2+. Supported by NIH grant AR32805 and AHA 10POST4490012.

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Lawrence Salkoff

Washington University in St. Louis

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Alice Butler

Washington University in St. Louis

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Jianmin Cui

Washington University in St. Louis

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Gonzalo Budelli

Washington University in St. Louis

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Guohui Zhang

Washington University in St. Louis

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Peng Yuan

Washington University in St. Louis

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Jingyi Shi

Washington University in St. Louis

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