Yanyun Zhang

Phylogeography of Silver Pheasant (Lophura nycthemera L.) across China: aggregate effects of refugia, introgression and riverine barriers.

The role of Pleistocene glacial cycles in forming the contemporary genetic structure of organisms has been well studied in China with a particular focus on the Tibetan Plateau. However, China has a complex topography and diversity of local climates, and how glacial cycles may have shaped the subtropical and tropical biota of the region remains mostly unaddressed. To investigate the factors that affected the phylogeography and population history of a widely distributed and nondeciduous forest species, we analysed morphological characters, mitochondrial DNA sequences and nuclear microsatellite loci in the Silver Pheasant (Lophura nycthemera). In a pattern generally consistent with phenotypic clusters, but not nominal subspecies, deeply divergent mitochondrial lineages restricted to different geographic regions were detected. Coalescent simulations indicated that the time of main divergence events corresponded to major glacial periods in the Pleistocene and gene flow was only partially lowered by drainage barriers between some populations. Intraspecific cytonuclear discordance was revealed in mitochondrial lineages from Hainan Island and the Sichuan Basin with evidence of nuclear gene flow from neighbouring populations into the latter. Unexpectedly, hybridization was revealed in Yingjiang between the Silver Pheasant and Kalij Pheasant (Lophura leucomelanos) with wide genetic introgression at both the mtDNA and nuclear levels. Our results highlight a novel phylogeographic pattern in a subtropical area generated from the combined effects of climate oscillation, partial drainage barriers and interspecific hybridization. Cytonuclear discordance combined with morphological differentiation implies that complex historical factors shaped the divergence process in this biodiversity hot spot area of southern China.

Acoustic identification of individuals within large avian populations: a case study of the Brownish-flanked Bush Warbler, South-Central China.

Acoustic identification is increasingly being used as a non-invasive method for identifying individuals within avian populations. However, most previous studies have utilized small samples of individuals (<30). The feasibility of using acoustic identification of individuals in larger avian populations has never been seriously tested. In this paper, we assess the feasibility of using distinct acoustic signals to identify individuals in a large avian population (139 colour-banded individuals) of Brownish-flanked Bush Warbler (Cettia fortipes) in the Dongzhai National Nature Reserve, south-central China. Most spectro-temporal variables we measured show greater variation among individuals than within individual. Although there was slight decline in the correct rate of individual identification with increasing sample sizes, the total mean correct rate yielded by discriminant function analysis was satisfactory, with more than 98% of songs correctly recognized to the corresponding individuals. We also found that using a part of randomly selected measured variables was sufficient to obtain a high correct rate of individual identification. We believe that our work will increase confidence in the use of using acoustic recognition techniques for avian population monitoring programs.

Integrative taxonomy of the Russet Bush Warbler Locustella mandelli complex reveals a new species from central China

BackgroundThe Russet Bush Warbler Locustella (previously Bradypterus) mandelli complex occurs in mountains in the eastern Himalayas, southern China, Vietnam, the Philippines, and Indonesia. The taxonomy has been debated, with one (L. seebohmi) to four (L. seebohmi, L. mandelli, L. montis and L. timorensis) species having been recognised.MethodsWe used an integrative approach, incorporating analyses of morphology, vocalizations and a molecular marker, to re-evaluate species limits in the L. mandelli complex.ResultsWe found that central Chinese L. mandelli differed from those from India through northern Southeast Asia to southeast China in plumage, morphometrics and song. All were easily classified by song, and (wing + culmen)/tail ratio overlapped only marginally. Both groups were reciprocally monophyletic in a mitochondrial cytochrome b (cytb) gene tree, with a mean divergence of 1.0 ± 0.2%. They were sympatric and mostly altitudinally segregated in the breeding season in southern Sichuan province. We found that the Mt Victoria (western Myanmar) population differed vocally from other L. mandelli, but no specimens are available. Taiwan Bush Warbler L. alishanensis was sister to the L. mandelli complex, with the most divergent song. Plumage, vocal and cytb evidence supported the distinctness of the south Vietnamese L. mandelli idonea. The Timor Bush Warbler L. timorensis, Javan Bush Warbler L. montis and Benguet Bush Warbler L. seebohmi differed distinctly in plumage, but among-population song variation in L. montis exceeded the differences between some populations of these taxa, and mean pairwise cytb divergences were only 0.5–0.9%. We also found that some L. montis populations differed morphologically.ConclusionsWe conclude that the central Chinese population of Russet Bush Warbler represents a new species, which we describe herein, breeding at mid elevations in Sichuan, Shaanxi, Hubei, Hunan and Guizhou provinces. The taxonomic status of the other allopatric populations is less clear. However, as they differ to a degree comparable with that of the sympatric L. mandelli and the new species, we elevate L. idonea to species status, and retain L. seebohmi and L. montis as separate species, the latter with timorensis as a subspecies. Further research should focus on different populations of L. montis and the Mt Victoria population of L. mandelli.

Is a forest road a barrier for the Vulnerable Cabot's tragopan Tragopan caboti in Wuyishan, Jiangxi, China?

Cabots tragopan Tragopan caboti is categorized as Vulnerable on the IUCN Red List, listed on Appendix I of CITES and is endemic to China. Habitat loss and frag- mentation are believed to be the main causes of decreases in abundance of the species. Wuyishan National Natural Reserve supports a relatively stable population of the trag- opan but is bisected by a clay road through the core area. This study used direct observation and radio telemetry to investigate the impact of the road on the species. We found that weather was the most important factor affecting the number of individuals actually seen on the road, and the volume of traffic was the main factor affecting the be- haviour of individuals, especially at dusk. The road does not appear to be a barrier for Cabots tragopan but appro- priate management is required to ensure the continued survival of the species at this site.

Territory Tenure Increases with Repertoire Size in Brownish-Flanked Bush Warbler

Song repertoire size is often cited as a classic example of a secondary sexual trait in birds. Models of sexual selection and empirical tests of their predictions have often related secondary sexual traits to longevity. However, the relationship between repertoire size and longevity is unclear. Using capture-mark-recapture studies in two populations of the brownish-flanked bush warbler Cettia fortipes, we found that males with a repertoire size of three maintained territory tenure for a longer duration than did males with a repertoire size of two. These results provide evidence that even a minimal difference in repertoire size can serve as a potential signal of territory tenure capability.

High prevalence and narrow host range of haemosporidian parasites in Godlewski's bunting (Emberiza godlewskii) in northern China

Avian haemosporidian parasites are highly diverse, have a wide range of host specificity, and reveal diverse compatibility with regard to host range and geographical distribution. Therefore, understanding haemosporidian parasite diversity in different host species and different regions is crucial. A survey of the haemosporidian parasite in 186 Godlewskis buntings in Beijing was conducted to compare infection patterns between Godlewskis bunting, local passerines and the global avian host. High prevalence (88.7%) was found in the bunting and displayed annual stability during the research period. Most of the infections were caused by four dominant lineages, three of which were clustered with lineages of morphological species. In comparison with other lineages in local passerines, the dominant lineages were relative specialists. The findings suggest that the compatibility of dominant lineages in the bunting hosts may play important roles in high haemosporidian prevalence, and the narrow host range of the dominant lineages may be due to coevolution between the parasites and host species.

From Himalayas to Continental Island: Integrative species delimitation in the Brownish-flanked Bush Warbler Horornis fortipes complex

As species serve as basic units of study in many fields of biology, assessments of species limits are fundamental for such studies. Here, we used a multilocus dataset and different coalescent-based methods to analyze species delimitation and phylogenetic relationships in the Brownish-flanked Bush Warbler Horornis fortipes complex, which is widespread in the Sino-Himalayan region. We also examined the vocal and morphometric divergence within this complex. Our genetic results suggested that Horornis fortipes is composed of at least three independently evolving lineages, which diverged 1.1-1.8 million years ago. However, these lineages have hardly diverged in song or morphometrics and only very slightly in plumage. Our result indicate that there are three incipient species in Horonis fortipes complex diverged in central Himalayas and Hengduan Mountains, but not between the continent and Taiwan island.

Components of variation in female common cuckoo calls

Investigations on bird vocalizations have largely focused on males. Female vocalizations are widespread in birds but few studies have investigated female vocal characteristics, particularly in non-Passeriformes. In this study, we use new field recordings from China, and calls available from an online sound library to examine temporal patterns, call consistency and geographical variation in vocalizations of female common cuckoos Cuculus canorous. The peak in vocal activity (both male and female) was in the morning, which contrasts to what would be predicted if the sole function of the female call was to distract the attention of hosts after parasitizing a hosts nest in the afternoon. Both male and female common cuckoos were more vocally active in sunny weather, than rainy weather. We also found larger intra-individual variation in female rather than in male calls, which may benefit female cuckoos by increasing stimulation to host species. Peak frequency of female calls decreased with increased latitude, while differences in female call features were not associated with geographic distance. In summary, our findings that female calls are used in the morning, rather than at peak egg laying, yet are highly variable and show little geographic patterns suggest that the function of these female calls may be more variable and intricate than previously thought. However, because research on female vocalizations is underrepresented, future studies are still needed.

Reliability of the Brownish-flanked Bush Warbler's soft song in male-male conflict

BackgroundSoft song is a low-amplitude song produced by many birds. Recent studies have confirmed that soft song is an aggressive signal. For example, the Brownish-flanked Bush Warblers Cettia fortipes use soft song in male-male conflicts, particularly prior to attacks. Although stable signaling systems require that signals be honest on average, models predict that cheating is an acceptable strategy for some individuals or in some contexts.MethodsThis study aimed to test the reliability of soft song as an aggressive signal in the brownish-flanked bush warbler. We used mounted specimens accompanied by broadcast songs or soft songs to simulate a male attempting to invade an existing territory.ResultsWe found the mounted specimen that coupled playback of soft songs suffered more and quicker attacks from the territory owner and that the relationship between soft song and subsequent attack in the territory owner was far from perfect. We observed territory owners that both over-signaled (i.e., produced soft song but did not attack) and under-signaled (i.e., attacked without producing soft song). Under-signaling territory owners were relatively more commonly than were over-signaling territory owners, particularly in simulated intrusion that coupled playback of soft song with a mount specimen.ConclusionsWe discuss the cost of producing soft song and the potential benefit of the unreliable use of soft song and propose a new hypothesis for under-signaling with soft song; i.e., under-signaling territory owners might benefit from taking the initiative in fights.