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Featured researches published by Yayoi Aki.


PLOS ONE | 2015

An Origin of Cooperative Oxygen Binding of Human Adult Hemoglobin: Different Roles of the α and β Subunits in the α2β2 Tetramer

Shigenori Nagatomo; Yukifumi Nagai; Yayoi Aki; Hiroshi Sakurai; Kiyohiro Imai; Naoki Mizusawa; Takashi Ogura; Teizo Kitagawa; Masako Nagai

Human hemoglobin (Hb), which is an α2β2 tetramer and binds four O2 molecules, changes its O2-affinity from low to high as an increase of bound O2, that is characterized by ‘cooperativity’. This property is indispensable for its function of O2 transfer from a lung to tissues and is accounted for in terms of T/R quaternary structure change, assuming the presence of a strain on the Fe-histidine (His) bond in the T state caused by the formation of hydrogen bonds at the subunit interfaces. However, the difference between the α and β subunits has been neglected. To investigate the different roles of the Fe-His(F8) bonds in the α and β subunits, we investigated cavity mutant Hbs in which the Fe-His(F8) in either α or β subunits was replaced by Fe-imidazole and F8-glycine. Thus, in cavity mutant Hbs, the movement of Fe upon O2-binding is detached from the movement of the F-helix, which is supposed to play a role of communication. Recombinant Hb (rHb)(αH87G), in which only the Fe-His in the α subunits is replaced by Fe-imidazole, showed a biphasic O2-binding with no cooperativity, indicating the coexistence of two independent hemes with different O2-affinities. In contrast, rHb(βH92G), in which only the Fe-His in the β subunits is replaced by Fe-imidazole, gave a simple high-affinity O2-binding curve with no cooperativity. Resonance Raman, 1H NMR, and near-UV circular dichroism measurements revealed that the quaternary structure change did not occur upon O2-binding to rHb(αH87G), but it did partially occur with O2-binding to rHb(βH92G). The quaternary structure of rHb(αH87G) appears to be frozen in T while its tertiary structure is changeable. Thus, the absence of the Fe-His bond in the α subunit inhibits the T to R quaternary structure change upon O2-binding, but its absence in the β subunit simply enhances the O2-affinity of α subunit.


Chirality | 2016

Heme Orientation of Cavity Mutant Hemoglobins (His F8 → Gly) in Either α or β Subunits: Circular Dichroism, 1H NMR, and Resonance Raman Studies

Masako Nagai; Yukifumi Nagai; Yayoi Aki; Hiroshi Sakurai; Naoki Mizusawa; Takashi Ogura; Teizo Kitagawa; Yasuhiko Yamamoto; Shigenori Nagatomo

Native human adult hemoglobin (Hb A) has mostly normal orientation of heme, whereas recombinant Hb A (rHb A) expressed in E. coli contains both normal and reversed orientations of heme. Hb A with the normal heme exhibits positive circular dichroism (CD) bands at both the Soret and 260-nm regions, while rHb A with the reversed heme shows a negative Soret and decreased 260-nm CD bands. In order to examine involvement of the proximal histidine (His F8) of either α or β subunits in determining the heme orientation, we prepared two cavity mutant Hbs, rHb(αH87G) and rHb(βH92G), with substitution of glycine for His F8 in the presence of imidazole. CD spectra of both cavity mutant Hbs did not show a negative Soret band, but instead exhibited positive bands with strong intensity at the both Soret and 260-nm regions, suggesting that the reversed heme scarcely exists in the cavity mutant Hbs. We confirmed by (1) H NMR and resonance Raman (RR) spectroscopies that the cavity mutant Hbs have mainly the normal heme orientation in both the mutated and native subunits. These results indicate that the heme Fe-His F8 linkage in both α and β subunits influences the heme orientation, and that the heme orientation of one type of subunit is related to the heme orientation of the complementary subunits to be the same. The present study showed that CD and RR spectroscopies also provided powerful tools for the examination of the heme rotational disorder of Hb A, in addition to the usual (1) H NMR technique. Chirality 28:585-592, 2016.


Biochemistry | 2008

Effect of Reversed Heme Orientation on Circular Dichroism and Cooperative Oxygen Binding of Human Adult Hemoglobin

Masako Nagai; Yukifumi Nagai; Yayoi Aki; Kiyohiro Imai; Yoshinao Wada; Shigenori Nagatomo; Yasuhiko Yamamoto


Biochemical and Biophysical Research Communications | 2007

Oxygenation properties of extracellular giant hemoglobin from Oligobrachia mashikoi

Yayoi Aki; Taro Nakagawa; Masako Nagai; Yuichi Sasayama; Yoshihiro Fukumori; Kiyohiro Imai


Journal of Biological Inorganic Chemistry | 2010

Differences in coordination states of substituted tyrosine residues and quaternary structures among hemoglobin M probed by resonance Raman spectroscopy

Yayoi Aki; Masako Nagai; Yukifumi Nagai; Kiyohiro Imai; Michihiko Aki; Akira Sato; Minoru Kubo; Shigenori Nagatomo; Teizo Kitagawa


生物物理 | 2014

1P094 α鎖あるいはβ鎖の近位ヒスチジンがグリシンに置換された変異ヘモグロビンの機能と構造(02. ヘム蛋白質,ポスター,第52回日本生物物理学会年会(2014年度))

Shigenori Nagatomo; Y. Nagai; Yayoi Aki; Hiroshi Sakurai; Natsumi Maruyama; Kiyohiro Imai; Naoki Mizusawa; Takashi Ogura; Teizo Kitagawa; Masako Nagai


Seibutsu Butsuri | 2014

1P094 Function and structure of mutant hemoglobins with the proximal histidine replaced by glycine in either α or β subunit(02. Heme proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Shigenori Nagatomo; Y. Nagai; Yayoi Aki; Hiroshi Sakurai; Natsumi Maruyama; Kiyohiro Imai; Naoki Mizusawa; Takashi Ogura; Teizo Kitagawa; Masako Nagai


生物物理 | 2012

2PT159 ヒトヘモグロビンα鎖の近位ヒスチジンのグリシンへの置換が構造と酸素結合機能に与える影響(日本生物物理学会第50回年会(2012年度))

Yayoi Aki; Yukifumi Nagai; Kiyohiro Imai; Shigenori Nagatomo; Takashi Ogura; Teizo Kitagawa; Masako Nagai


Seibutsu Butsuri | 2012

2PT159 Substitution effects of Gly for the proximal His of α subunits on the structure and oxygen binding function of human hemoglobin(The 50th Annual Meeting of the Biophysical Society of Japan)

Yayoi Aki; Yukifumi Nagai; Kiyohiro Imai; Shigenori Nagatomo; Takashi Ogura; Teizo Kitagawa; Masako Nagai


生物物理 | 2009

1P-077 共鳴ラマン分光法によるヘモグロビンMの近位または遠位チロシン残基の配位状態と四次構造の解明(ヘム蛋白質,第47回日本生物物理学会年会)

Yayoi Aki; Masako Nagai; Kiyohiro Imai; Michihiko Aki; Teizo Kitagawa

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