Youla Karavidopoulou
European Bioinformatics Institute
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Publication
Featured researches published by Youla Karavidopoulou.
Nucleic Acids Research | 2001
Rolf Apweiler; Margaret Biswas; Wolfgang Fleischmann; Alexander Kanapin; Youla Karavidopoulou; Paul J. Kersey; Evgenia V. Kriventseva; Virginie Mittard; Nicola Mulder; Isabelle Phan; Evgeni M. Zdobnov
The SWISS-PROT group at EBI has developed the Proteome Analysis Database utilising existing resources and providing comparative analysis of the predicted protein coding sequences of the complete genomes of bacteria, archaea and eukaryotes (http://www.ebi.ac. uk/proteome/). The two main projects used, InterPro and CluSTr, give a new perspective on families, domains and sites and cover 31-67% (InterPro statistics) of the proteins from each of the complete genomes. CluSTr covers the three complete eukaryotic genomes and the incomplete human genome data. The Proteome Analysis Database is accompanied by a program that has been designed to carry out InterPro proteome comparisons for any one proteome against any other one or more of the proteomes in the database.
Nucleic Acids Research | 2003
Manuela Pruess; Wolfgang Fleischmann; Alexander Kanapin; Youla Karavidopoulou; Paul J. Kersey; Evgenia V. Kriventseva; Virginie Mittard; Nicola Mulder; Isabelle Phan; Florence Servant; Rolf Apweiler
The Proteome Analysis database (http://www.ebi.ac.uk/proteome/) has been developed by the Sequence Database Group at EBI utilizing existing resources and providing comparative analysis of the predicted protein coding sequences of the complete genomes of bacteria, archeae and eukaryotes. Three main projects are used, InterPro, CluSTr and GO Slim, to give an overview on families, domains, sites, and functions of the proteins from each of the complete genomes. Complete proteome analysis is available for a total of 89 proteome sets. A specifically designed application enables InterPro proteome comparisons for any one proteome against any other one or more of the proteomes in the database.
Bioinformatics | 2002
Alexander Kanapin; Rolf Apweiler; Margaret Biswas; Wolfgang Fleischmann; Youla Karavidopoulou; Paul J. Kersey; Evgenia V. Kriventseva; Virginie Mittard; Nicola Mulder; Tom Oinn; Isabelle Phan; Florence Servant; Evgeni M. Zdobnov
MOTIVATION The SWISS-PROT group at the EBI has developed the Proteome Analysis Database utilizing existing resources and providing comprehensive and integrated comparative analysis of the predicted protein coding sequences of the complete genomes of bacteria, archaea and eukaryotes. The Proteome Analysis Database is accompanied by a program that has been designed to carry out interactive InterPro proteome comparisons for any one proteome against any other one or more of the proteomes in the database.
Nucleic Acids Research | 2001
Rolf Apweiler; Terri K. Attwood; Amos Marc Bairoch; Alex Bateman; Ewan Birney; Margaret Biswas; Philipp Bucher; Lorenzo Cerutti; Florence Corpet; Michael D. R. Croning; Richard Durbin; Laurent Falquet; Wolfgang Fleischmann; Jérôme Gouzy; Henning Hermjakob; Nicolas Hulo; Inge Jonassen; Daniel Kahn; Alexander Kanapin; Youla Karavidopoulou; Rodrigo Lopez; Beate Marx; Nicola Mulder; Tom Oinn; Marco Pagni; Florence Servant; Christian J. A. Sigrist; Evgeni M. Zdobnov
Proteomics | 2004
Paul J. Kersey; Jorge Duarte; Allyson Williams; Youla Karavidopoulou; Ewan Birney; Rolf Apweiler
Bioinformatics | 2000
Rolf Apweiler; Terri K. Attwood; Amos Marc Bairoch; Alex Bateman; Ewan Birney; Margaret Biswas; Philipp Bucher; Lorenzo Cerutti; Florence Corpet; Michael D. R. Croning; Richard Durbin; Wolfgang Fleischmann; Jérôme Gouzy; Henning Hermjakob; Nicolas Hulo; Inge Jonassen; Daniel Kahn; Alexander Kanapin; Youla Karavidopoulou; Rodrigo Lopez; Beate Marx; Nicola Mulder; Tom Oinn; Marco Pagni; Florence Servant; Christian J. A. Sigrist; Evgeni M. Zdobnov
Briefings in Bioinformatics | 2002
Margaret Biswas; Joseph F. O'Rourke; Evelyn Camon; Gillian M. Fraser; Alexander Kanapin; Youla Karavidopoulou; Paul J. Kersey; Evgenia V. Kriventseva; Virginie Mittard; Nicola Mulder; Isabelle Phan; Florence Servant; Rolf Apweiler
Archive | 2004
Paul J. Kersey; Jorge Duarte; Allyson Williams; Youla Karavidopoulou; Ewan Birney; Rolf Apweiler
Molecular & Cellular Proteomics | 2002
Manuela Pruess; Alexander Kanapin; Youla Karavidopoulou; Paul J. Kersey; Virginie Mittard; Isabelle Phan; Florence Servant; Rolf Apweiler
german conference on bioinformatics | 2000
Margaret Biswas; Rolf Apweiler; Wolfgang Fleischmann; Alexander Kanapin; Youla Karavidopoulou; Paul J. Kersey; Evgenia V. Kriventseva; Virginie Mittard; Nicola Mulder; Tom Oinn; Isabelle Phan; Evgeni M. Zdobnov
Collaboration
Dive into the Youla Karavidopoulou's collaboration.
