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Dive into the research topics where Yu-Ping Luong is active.

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Featured researches published by Yu-Ping Luong.


Antimicrobial Agents and Chemotherapy | 2006

Preclinical Profile of VX-950, a Potent, Selective, and Orally Bioavailable Inhibitor of Hepatitis C Virus NS3-4A Serine Protease

Robert B. Perni; Susan J. Almquist; Randal Byrn; Gurudatt Chandorkar; Pravin R. Chaturvedi; Lawrence F. Courtney; Caroline J. Decker; Kirk Dinehart; Cynthia A. Gates; Scott L. Harbeson; Angela Heiser; Gururaj Kalkeri; Elaine Kolaczkowski; Kai Lin; Yu-Ping Luong; B. Govinda Rao; William P. Taylor; John A. Thomson; Roger D. Tung; Yunyi Wei; Ann D. Kwong; Chao Lin

ABSTRACT VX-950 is a potent, selective, peptidomimetic inhibitor of the hepatitis C virus (HCV) NS3-4A serine protease, and it demonstrated excellent antiviral activity both in genotype 1b HCV replicon cells (50% inhibitory concentration [IC50] = 354 nM) and in human fetal hepatocytes infected with genotype 1a HCV-positive patient sera (IC50 = 280 nM). VX-950 forms a covalent but reversible complex with the genotype 1a HCV NS3-4A protease in a slow-on, slow-off process with a steady-state inhibition constant (Ki*) of 7 nM. Dissociation of the covalent enzyme-inhibitor complex of VX-950 and genotype 1a HCV protease has a half-life of almost an hour. A >4-log10 reduction in the HCV RNA levels was observed after a 2-week incubation of replicon cells with VX-950, with no rebound of viral RNA observed after withdrawal of the inhibitor. In several animal species, VX-950 exhibits a favorable pharmacokinetic profile with high exposure in the liver. In a recently developed HCV protease mouse model, VX-950 showed excellent inhibition of HCV NS3-4A protease activity in the liver. Therefore, the overall preclinical profile of VX-950 supports its candidacy as a novel oral therapy against hepatitis C.


Journal of Biological Chemistry | 2005

In vitro studies of cross-resistance mutations against two hepatitis C virus serine protease inhibitors, VX-950 and BILN 2061

Chao Lin; Cynthia A. Gates; B. Govinda Rao; Debra L. Brennan; John R. Fulghum; Yu-Ping Luong; J. Daniel Frantz; Kai Lin; Sue Ma; Yunyi Wei; Robert B. Perni; Ann D. Kwong

VX-950 is a potent, small molecule, peptidomimetic inhibitor of the hepatitis C virus (HCV) NS3·4A serine protease and has recently been shown to possess antiviral activity in a phase I trial in patients chronically infected with genotype 1 HCV. In a previous study, we described in vitro resistance mutations against either VX-950 or another HCV NS3·4A protease inhibitor, BILN 2061 (Lin, C., Lin, K., Luong, Y.-P., Rao, B. G., Wei, Y.-Y., Brennan, D. L., Fulghum, J. R., Hsiao, H.-M., Ma, S., Maxwell, J. P., Cottrell, K. M., Perni, R. B., Gates, C. A., and Kwong, A. D. (2004) J. Biol. Chem. 279, 17508-17514). Single amino acid substitutions that conferred drug resistance (distinct for either inhibitor) were identified in the HCV NS3 serine protease domain. The dominant VX-950-resistant mutant (A156S) remains sensitive to BILN 2061. The major BILN 2061-resistant mutants (D168V and D168A) are fully susceptible to VX-950. Modeling analysis suggested that there are different mechanisms of resistance for these mutations induced by VX-950 or BILN 2061. In this study, we identified mutants that are cross-resistant to both HCV protease inhibitors. The cross-resistance conferred by substitution of Ala156 with either Val or Thr was confirmed by characterization of the purified enzymes and reconstituted replicon cells containing the single amino acid substitution A156V or A156T. Both cross-resistance mutations (A156V and A156T) displayed significantly diminished fitness (or replication capacity) in a transient replicon cell system.


Bioorganic & Medicinal Chemistry Letters | 1994

The synthesis and evaluation of peptidyl aspartyl aldehydes as inhibitors of ice.

Michael Mullican; David J. Lauffer; Roger John Gillespie; Saroop S. Matharu; David Kay; Geoffrey M. Porritt; Phillip L. Evans; Julian Golec; Mark A. Murcko; Yu-Ping Luong; Scott A. Raybuck; David J. Livingston

Abstract The tetrapeptide aldehyde Ac-Tyr-Val-Ala-AspH ( 1 , L-709,049) has been reported to be a potent reversible inhibitor of Interleukin-1β Converting Enzyme (ICE). We have prepared a series of analogs of 1 , in order to explore the active sige of ICE. The effects of truncation, methylation of the amide nitrogens and modification of the aldehyde group of 1 are presented.


Bioorganic & Medicinal Chemistry Letters | 1997

Structure-based design of non-peptidic pyridone aldehydes as inhibitors of interleukin-1β converting enzyme

Julian Golec; Michael Mullican; Mark A. Murcko; Keith P. Wilson; David Kay; Stuart Donald Jones; Robert Murdoch; Guy W. Bemis; Scott A. Raybuck; Yu-Ping Luong; David J. Livingston

Abstract Pyridone derivatives, especially with 6-aryl substituents, have been shown to be useful P2-P3 peptidomimetic scaffolds for the design of potent inhibitors of ICE.


Journal of Biological Chemistry | 2004

In Vitro Resistance Studies of Hepatitis C Virus Serine Protease Inhibitors, VX-950 and BILN 2061 STRUCTURAL ANALYSIS INDICATES DIFFERENT RESISTANCE MECHANISMS

Chao Lin; Kai Lin; Yu-Ping Luong; B. Govinda Rao; Yunyi Wei; Debra L. Brennan; John R. Fulghum; Hsun-Mei Hsiao; Sue Ma; John Maxwell; Kevin M. Cottrell; Robert B. Perni; Cynthia A. Gates; Ann D. Kwong


Bioorganic & Medicinal Chemistry Letters | 2004

Inhibitors of hepatitis C virus NS3·4A protease 2. Warhead SAR and optimization

Robert B. Perni; Janos Pitlik; Shawn D. Britt; John J. Court; Lawrence F. Courtney; David D. Deininger; Luc J. Farmer; Cynthia A. Gates; Scott L. Harbeson; Rhonda B. Levin; Chao Lin; Kai Lin; Young-Choon Moon; Yu-Ping Luong; Ethan T. O'Malley; B. Govinda Rao; John A. Thomson; Roger D. Tung; John H. Van Drie; Yunyi Wei


Bioorganic & Medicinal Chemistry Letters | 2004

Inhibitors of hepatitis C virus NS3·4A protease. Part 3: P2 proline variants

Robert B. Perni; Luc J. Farmer; Kevin M. Cottrell; John J. Court; Lawrence F. Courtney; David D. Deininger; Cynthia A. Gates; Scott L. Harbeson; Joseph L. Kim; Chao Lin; Kai Lin; Yu-Ping Luong; John Maxwell; Mark A. Murcko; Janos Pitlik; B. Govinda Rao; Wayne C. Schairer; Roger D. Tung; John H. Van Drie; Keith P. Wilson; John A. Thomson


Bioorganic & Medicinal Chemistry Letters | 2003

Inhibitors of hepatitis C virus NS3.4A protease 1. Non-charged tetrapeptide variants.

Robert B. Perni; Shawn D. Britt; John C. Court; Lawrence F. Courtney; David D. Deininger; Luc J. Farmer; Cynthia A. Gates; Scott L. Harbeson; Joseph L. Kim; James A. Landro; Rhonda B. Levin; Yu-Ping Luong; Ethan T. O'Malley; Janos Pitlik; B.Govinda Rao; Wayne C. Schairer; John A. Thomson; Roger D. Tung; John H. Van Drie; Yunyi Wei


Bioorganic & Medicinal Chemistry Letters | 2007

Inhibitors of hepatitis C virus NS3.4A protease. Effect of P4 capping groups on inhibitory potency and pharmacokinetics.

Robert B. Perni; Gurudatt Chandorkar; Kevin M. Cottrell; Cynthia A. Gates; Chao Lin; Kai Lin; Yu-Ping Luong; John Maxwell; Mark A. Murcko; Janos Pitlik; Govinda Rao; Wayne C. Schairer; John H. Van Drie; Yunyi Wei


Hepatology | 2003

972 VX-950: the discovery of an inhibitor of the hepatitis C NS3·4A protease and a potential hepatitis C virus therapeutic

Robert B. Perni; Gurudatt Chandorkar; Pravin R. Chaturvedi; Lawrence F. Courtney; Caroline J. Decker; Cynthia A. Gates; Scott L. Harbeson; Ann D. Kwong; Chao Lin; Yu-Ping Luong; William Markland; Govinda Rao; Roger D. Tung; John A. Thomson

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Robert B. Perni

Rensselaer Polytechnic Institute

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Kai Lin

Vertex Pharmaceuticals

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Chao Lin

Vertex Pharmaceuticals

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John A. Thomson

Massachusetts Institute of Technology

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Yunyi Wei

Vertex Pharmaceuticals

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