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Featured researches published by Yukihiro Fukunaga.


Journal of Biochemistry | 2008

The Unfolding of α-Momorcharin Proceeds Through the Compact Folded Intermediate

Yukihiro Fukunaga; Etsuko Nishimoto; Takuhiro Otosu; Yasutaka Murakami; Shoji Yamashita

The unfolding of alpha-momorcharin was systematically investigated using steady-state and time-resolved tryptophan fluorescence, circular dichroism and 8-anilino-1-naphthalenesulfonic acid (ANS) binding. These spectroscopic studies demonstrated that alpha-momorcharin unfolded through a compact folded intermediate state. The content of alpha-helix was increased, Trp192 approached closer to the side of active site and its rotational motion was restricted by being equilibrated with 2-3 M of guanidine hydrochloride. Furthermore, the binding of ANS with alpha-momorcharin was more suppressed to show that the hydrophobic parts would not be accessed to the protein surface but rather be sealed off in this specific conformation state. These results suggest that the structure of alpha-momorcharin holds the more compact conformation as an incipient state for unfolding, which is the sharp contrast to beta-momorcharin that gives the characteristics of the generally known molten globule state.


Journal of Biochemistry | 2006

The Partially Unfolded State of β-Momorcharin Characterized with Steady-state and Time-resolved Fluorescence Studies

Yukihiro Fukunaga; Etsuko Nishimoto; Katsumi Yamashita; Takuhiro Otosu; Shoji Yamashita


Journal of Fluorescence | 2014

Sugar binding effects on the enzymatic reaction and conformation near the active site of pokeweed antiviral protein revealed by fluorescence spectroscopy.

Hiromichi Nakashima; Yukihiro Fukunaga; Ryosuke Ueno; Etsuko Nishimoto


Journal of Fluorescence | 2013

Structural Characteristic of Folding/Unfolding Intermediate of Pokeweed Anti-viral Protein Revealed by Time-resolved Fluorescence

Shuzo Matsumoto; Yuka Taniguchi; Yukihiro Fukunaga; Hiromichi Nakashima; Keiichi Watanabe; Shoji Yamashita; Etsuko Nishimoto


Tetrahedron | 2016

Synthesis of fluorescent molecular probes based on cis-cinnamic acid and molecular imaging of lettuce roots

Hiroshi Fukuda; Keisuke Nishikawa; Yukihiro Fukunaga; Katsuhiro Okuda; Kozue Kodama; Kenji Matsumoto; Arihiro Kano; Mitsuru Shindo


生物物理 | 2012

2PT122 PAPの酵素活性制御因子としてのトリプトファン残基近傍のコンフォメーションとダイナミクス(日本生物物理学会第50回年会(2012年度))

Hiromichi Nakashima; Yukihiro Fukunaga; Keiichi Watanabe; Shoji Yamashita; Etsuko Nishimoto


Seibutsu Butsuri | 2012

2PT122 The dynamics and conformation of Trp208 and Trp237 as regulating factor of enzymatic activity of Pokeweed Antiviral Protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Hiromichi Nakashima; Yukihiro Fukunaga; Keiichi Watanabe; Shoji Yamashita; Etsuko Nishimoto


生物物理 | 2011

2H1512 Trp-Trp間エネルギー移動とPAPのfolding/unfolding研究への応用(蛋白質_物性3,第49回日本生物物理学会年会)

Yuka Taniguchi; Junpei Torii; Yukihiro Fukunaga; Keiichi Watanabe; Shoji Yamashita; Etsuko Nishimoto


Biophysics | 2010

1P047 Fluorescence spectroscopic characterization of folding/unfolding intermediate of ribosome-inactivation protein(Protein:Property,The 48th Annual Meeting of the Biophysical Society of Japan)

Yukihiro Fukunaga; Etsuko Nishimoto; Naoki Futita; Keiiti Watanabe; Shoji Yamashita


Biophysics | 2006

2P010 Fluorescence spectroscopic study on the CaM-target protein interaction-Interaction with melittin(29. Protein structure and dynamics (II),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Takuhiro Otosu; Etsuko Nishimoto; Yukihiro Fukunaga; Yoshifumi Miyazaki; Shoji Yamashita

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