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Dive into the research topics where Yuri Pekarsky is active.

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Featured researches published by Yuri Pekarsky.


Current Biology | 2000

Crystal structure of the worm NitFhit Rosetta Stone protein reveals a Nit tetramer binding two Fhit dimers

Helen C. Pace; Santosh C. Hodawadekar; Alexandra Draganescu; J Huang; Pawel Bieganowski; Yuri Pekarsky; Carlo M. Croce; Charles Brenner

BACKGROUNDnThe nucleotide-binding protein Fhit, among the earliest and most frequently inactivated proteins in lung cancer, suppresses tumor formation by inducing apoptosis. In invertebrates, Fhit is encoded as a fusion protein with Nit, a member of the nitrilase superfamily. In mice, the Nit1 and Fhit genes have nearly identical expression profiles. According to the Rosetta Stone hypothesis, if the separate Nit and Fhit genes could be shown to occur in the same subset of genomes (that is, to share a phylogenetic profile), then the existence of a fusion protein in invertebrates and the coordinated expression of separate mRNAs in mouse suggest that Nit and Fhit function in the same pathway and that the structure of invertebrate NitFhit may reflect the nature of Nit-Fhit interactions.nnnRESULTSnTo satisfy the phylogenetic profile criterion for functional significance of protein fusion events, we cloned additional Nit homologs from organisms with Fhit homologs. We used fluorescent nucleotide analogs of ApppA to follow the purification and to characterize the nucleotide specificity of NitFhit from Caenorhabditis elegans, crystallized the 200 kDa tetrameric complex, and solved the structure of NitFhit from a single mercury derivative phased by two-wavelength anomalous diffraction.nnnCONCLUSIONSnNit monomers possess a new alpha-beta-beta-alpha sandwich fold with a presumptive Cys-Glu-Lys catalytic triad. Nit assembles into a tetrameric, 52-stranded beta box that binds Fhit dimers at opposite poles and displays Nit active sites around the middle of the complex. The most carboxy-terminal beta strand of each Nit monomer exits the core of the Nit tetramer and interacts with Fhit. Residence in the NitFhit complex does not alter the nucleotide specificity of Fhit dimers, which are oriented with ApppA-binding surfaces away from Nit.


Lancet Oncology | 2002

FHIT: from gene discovery to cancer treatment and prevention

Yuri Pekarsky; Nicola Zanesi; Alexey Palamarchuk; Kay Huebner; Carlo M. Croce

Chromosomal abnormalities, including homozygous deletions and loss of heterozygosity, are among the most common features of human tumours. The short arm of human chromosome 3, particularly the region 3p14.2, is a major site of such rearrangements. The 3p14.2 region spans the most active common fragile site of the human genome, encompassing a familial-kidney-cancer-associated breakpoint and a papilloma virus integration site. 6 years ago, the FHIT gene was identified in this region. Subsequent studies have shown that FHIT is commonly the target of chromosomal aberrations involving the long arm of human chromosome 3 and is thereby inactivated in most of the common human malignant diseases, including cancers of the lung, oesophagus, stomach, breast, and kidney. During the past 5 years, evidence has accumulated in support of a tumour-suppressor function for FHIT. In this review, we describe the recent findings in the molecular biology of FHIT with particular focus on the opportunities for treatment and prevention of cancer that have emerged.


American Journal of Pharmacogenomics | 2003

Targeting Mature T Cell Leukemia

Yuri Pekarsky; Cora Hollas; Carlo M. Croce

The best studied T cell leukemia/lymphoma from a genetic and biochemical point of view is T-cell chronic lymphocytic/prolymphocytic leukemia (T-CLL/T-PLL). This neoplasia commonly shows chromosomal rearrangements at 14q32.1 including translocations [t(14;14)(q11;q32), t(7;14)(q35;q32)], and inversions [inv(14)(q11;q32)]. The investigation of the locus in question at 14q32.1 resulted in the identification of two related genes named T cell leukemia/lymphoma 1 (TCL1) and TCL1b. Both genes are activated in T-CLL/T-PLL by the chromosomal aberrations mentioned above. Mice from a transgenic mouse strain expressing the TCL1 gene under the thymocyte specific lck promoter developed a mature T cell leukemia late in life, thereby demonstrating that over-expression of TCL1 induces the neoplastic transformation of T cells.Biochemically, Tcl1 protein works as a co-factor of the Akt kinase, a key regulator of antiapoptotic and proliferative signals. Tcl1 interacts physically with Akt, increases its kinase activity and facilitates its transport to the nucleus. The pathogenesis of T-CLL/T-PLL may also involve Nur77, a T cell transcription factor required for T cell receptor-mediated apoptosis. Akt phosphorylates Nur77, thereby blocking its DNA-binding ability and rendering the transcription factor inactive.The recently emerged insights into the molecular mechanisms of T cell leukemogenesis will allow for the development of specific pharmacological tools for the treatment of these hematopoietic malignancies.


Cancer Research | 2001

Characterization of the 13q14 Tumor Suppressor Locus in CLL Identification of ALT1, an Alternative Splice Variant of the LEU2 Gene

Florencia Bullrich; Hidenori Fujii; George A. Calin; Hideaki Mabuchi; Massimo Negrini; Yuri Pekarsky; Laura Z. Rassenti; Hansjuerg Alder; John C. Reed; Michael J. Keating; Thomas J. Kipps; Carlo M. Croce


Proceedings of the National Academy of Sciences of the United States of America | 1999

Abnormalities at 14q32.1 in T cell malignancies involve two oncogenes

Yuri Pekarsky; Cora Hallas; Masaharu Isobe; Giandomenico Russo; Carlo M. Croce


Cancer Research | 1999

FHIT Loss of Function in Human Primary Breast Cancer Correlates with Advanced Stage of the Disease

Manuela Campiglio; Yuri Pekarsky; Sylvie Ménard; Elda Tagliabue; Silvana Pilotti; Carlo M. Croce


Proceedings of the National Academy of Sciences of the United States of America | 1998

Nitrilase and Fhit homologs are encoded as fusion proteins in Drosophila melanogaster and Caenorhabditis elegans

Yuri Pekarsky; Manuela Campiglio; Zurab Siprashvili; Teresa Druck; Yurii Sedkov; Sergei Tillib; Alexandra Draganescu; Peter J. Wermuth; Joel H. Rothman; Kay Huebner; Arthur M. Buchberg; Alexander Mazo; Charles Brenner; Carlo M. Croce


Archive | 2001

CRYSTAL STRUCTURE OF WORM NitFhit REVEALS THAT A Nit TETRAMER BINDS TWO Fhit DIMERS

Carlo M. Croce; Charles Brenner; Yuri Pekarsky


Hematology-oncology Clinics of North America | 2004

Tcl1 as a model for lymphomagenesis

Yuri Pekarsky; Nicola Zanesi; Rami Aqeilan; Carlo M. Croce


Archive | 2016

Tc11 enhances Akt kinase nuclear translocation

Yuri Pekarsky; Anatoliy Koval; Cora Hallas; Carlo M. Croce; Maria Tresini; Scott Malstrom; Giandomenico Russot

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Charles Brenner

Roy J. and Lucille A. Carver College of Medicine

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Cora Hallas

Thomas Jefferson University

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Kay Huebner

Thomas Jefferson University

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Rami Aqeilan

Thomas Jefferson University

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Alexander Mazo

Thomas Jefferson University

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