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Featured researches published by Yuyu Niu.


Cell | 2014

Generation of gene-modified cynomolgus monkey via Cas9/RNA-mediated gene targeting in one-cell embryos.

Yuyu Niu; Bin Shen; Yiqiang Cui; Yongchang Chen; Jianying Wang; Lei Wang; Yu Kang; Xiaoyang Zhao; Wei Si; Wei Li; Andy Peng Xiang; Jiankui Zhou; Xuejiang Guo; Ye Bi; Chenyang Si; Bian Hu; Guoying Dong; Hong Wang; Zuomin Zhou; Tianqing Li; Tao Tan; Xiuqiong Pu; Fang Wang; Shaohui Ji; Qi Zhou; Xingxu Huang; Weizhi Ji; Jiahao Sha

Monkeys serve as important model species for studying human diseases and developing therapeutic strategies, yet the application of monkeys in biomedical researches has been significantly hindered by the difficulties in producing animals genetically modified at the desired target sites. Here, we first applied the CRISPR/Cas9 system, a versatile tool for editing the genes of different organisms, to target monkey genomes. By coinjection of Cas9 mRNA and sgRNAs into one-cell-stage embryos, we successfully achieve precise gene targeting in cynomolgus monkeys. We also show that this system enables simultaneous disruption of two target genes (Ppar-γ and Rag1) in one step, and no off-target mutagenesis was detected by comprehensive analysis. Thus, coinjection of one-cell-stage embryos with Cas9 mRNA and sgRNAs is an efficient and reliable approach for gene-modified cynomolgus monkey generation.


Nature Communications | 2013

Genome of the Chinese tree shrew

Yu Fan; Zhiyong Huang; Changchang Cao; Ce-Shi Chen; Yuanxin Chen; Dingding Fan; Jing He; Haolong Hou; Li-Dan Hu; Xintian Hu; Xuanting Jiang; Ren Lai; Yongshan Lang; Bin Liang; Shengguang Liao; Dan Mu; Yuanye Ma; Yuyu Niu; Xiaoqing Sun; Jinquan Xia; Jin Xiao; Zhiqiang Xiong; Lin Xu; Lan Yang; Yun Zhang; Wei Zhao; Xudong Zhao; Yong-Tang Zheng; Ju-Min Zhou; Yabing Zhu

Chinese tree shrews (Tupaia belangeri chinensis) possess many features valuable in animals used as experimental models in biomedical research. Currently, there are numerous attempts to employ tree shrews as models for a variety of human disorders: depression, myopia, hepatitis B and C virus infections, and hepatocellular carcinoma, to name a few. Here we present a publicly available annotated genome sequence for the Chinese tree shrew. Phylogenomic analysis of the tree shrew and other mammalians highly support its close affinity to primates. By characterizing key factors and signalling pathways in nervous and immune systems, we demonstrate that tree shrews possess both shared common and unique features, and provide a genetic basis for the use of this animal as a potential model for biomedical research.


Human Molecular Genetics | 2015

Functional disruption of the dystrophin gene in Rhesus Monkey Using CRISPR/Cas9

Yongchang Chen; Yinghui Zheng; Yu Kang; Weili Yang; Yuyu Niu; Xiangyu Guo; Zhuchi Tu; Chenyang Si; Hong Wang; Ruxiao Xing; Xiuqiong Pu; Shang Hsun Yang; Shihua Li; Weizhi Ji; Xiao-Jiang Li

CRISPR/Cas9 has been used to genetically modify genomes in a variety of species, including non-human primates. Unfortunately, this new technology does cause mosaic mutations, and we do not yet know whether such mutations can functionally disrupt the targeted gene or cause the pathology seen in human disease. Addressing these issues is necessary if we are to generate large animal models of human diseases using CRISPR/Cas9. Here we used CRISPR/Cas9 to target the monkey dystrophin gene to create mutations that lead to Duchenne muscular dystrophy (DMD), a recessive X-linked form of muscular dystrophy. Examination of the relative targeting rate revealed that Crispr/Cas9 targeting could lead to mosaic mutations in up to 87% of the dystrophin alleles in monkey muscle. Moreover, CRISPR/Cas9 induced mutations in both male and female monkeys, with the markedly depleted dystrophin and muscle degeneration seen in early DMD. Our findings indicate that CRISPR/Cas9 can efficiently generate monkey models of human diseases, regardless of inheritance patterns. The presence of degenerated muscle cells in newborn Cas9-targeted monkeys suggests that therapeutic interventions at the early disease stage may be effective at alleviating the myopathy.


Stem Cells | 2007

Generation and Characterization of Rabbit Embryonic Stem Cells

Shufen Wang; Xianghui Tang; Yuyu Niu; Hongwei Chen; Bin Li; Tianqing Li; Xiuzhen Zhang; Zhixin Hu; Qi Zhou; Weizhi Ji

We described the derivation of four stable pluripotent rabbit embryonic stem cell (ESC) lines, one (RF) from blastocysts fertilized in vivo and cultured in vitro and three (RP01, RP02, and RP03) from parthenogenetic blastocysts. These ESC lines have been cultivated for extended periods (RF >1 year, RP01 >8 months, RP02 >8 months, and RP03 >6 months) in vitro while maintaining expression of pluripotent ESC markers and a normal XY or XX karyotype. The ESCs from all lines expressed alkaline phosphatase, transcription factor Oct‐4, stage‐specific embryonic antigens (SSEA‐1, SSEA‐3, and SSEA‐4), and the tumor‐related antigens (TRA‐1‐60 and TRA‐1‐81). Similar to human and mouse ESCs, rabbit ESCs expressed pluripotency (Oct‐4, Nanog, SOX2, and UTF‐1) and signaling pathway genes (fibroblast growth factor, WNT, and transforming growth factor pathway). Morphologically, rabbit ESCs resembled primate ESCs, whereas their proliferation characteristics were more like those seen in mouse ESCs. Rabbit ESCs were induced to differentiate into many cell types in vitro and formed teratomas with derivatives of the three major germ layers in vivo when injected into severe combined immunodeficient mice. Our results showed that pluripotent, stable ESC lines could be derived from fertilized and parthenote‐derived rabbit embryos.


Biology of Reproduction | 2007

Epigenetic Marks in Cloned Rhesus Monkey Embryos: Comparison with Counterparts Produced In Vitro

Jifeng Yang; Shihua Yang; Nathalie Beaujean; Yuyu Niu; Xiechao He; Yunhua Xie; Xianghui Tang; Liu Wang; Qi Zhou; Weizhi Ji

Abstract Until now, no primate animals have been successfully cloned to birth with somatic cell nuclear transfer (SCNT) procedures, and little is known about the molecular events that occurred in the reconstructed embryos during preimplantation development. In many SCNT cases, epigenetic reprogramming of the donor nuclei after transfer into enucleated oocytes was hypothesized to be crucial to the reestablishment of embryonic totipotency. In the present study, we focused on two major epigenetic marks, DNA methylation and histone H3 lysine 9 (H3K9) acetylation, which we examined by indirect immunofluorescence and confocal laser scanning microscopy. During preimplantation development, 67% of two-cell- and 50% of eight-cell-cloned embryos showed higher DNA methylation levels than their in vitro fertilization (IVF) counterparts, which undergo gradual demethylation until the early morula stage. Moreover, whereas an asymmetric distribution of DNA methylation was established in an IVF blastocysts with a lower methylation level in the inner cell mass (ICM) than in the trophectoderm, in most cloned blastocysts, ICM cells maintained a high degree of methylation. Finally, two donor cell lines (S11 and S1–04) that showed a higher level of H3K9 acetylation supported more blastocyst formation after nuclear transfer than the other cell line (S1–03), with a relatively low level of acetylation staining. In conclusion, we propose that abnormal DNA methylation patterns contribute to the poor quality of cloned preimplantation embryos and may be one of the obstacles to successful cloning in primates.


Cell Stem Cell | 2015

Generation of Cynomolgus Monkey Chimeric Fetuses using Embryonic Stem Cells

Yongchang Chen; Yuyu Niu; Yanjiao Li; Zongyong Ai; Yu Kang; Hong Shi; Zheng Xiang; Zhaohui Yang; Tao Tan; Wei Si; Wei Li; Xueshan Xia; Qi Zhou; Weizhi Ji; Tianqing Li

Because of their similarity to humans, non-human primates are important models for studying human disease and developing therapeutic strategies. Establishment of chimeric animals using embryonic stem cells (ESCs) could help with these investigations, but has not so far been achieved. Here, we show that cynomolgus monkey ESCs (cESCs) grown in adjusted culture conditions are able to incorporate into host embryos and develop into chimeras with contribution in all three germ layers and in germ cell progenitors. Under the optimized culture conditions, which are based on an approach developed previously for naive human ESCs, the cESCs displayed altered growth properties, gene expression profiles, and self-renewal signaling pathways, suggestive of an altered naive-like cell state. Thus our findings show that it is feasible to generate chimeric monkeys using ESCs and open up new avenues for the use of non-human primate models to study both pluripotency and human disease.


Cell Research | 2015

One-step generation of p53 gene biallelic mutant Cynomolgus monkey via the CRISPR/Cas system

Haifeng Wan; Chunjing Feng; Fei Teng; Shihua Yang; Baoyang Hu; Yuyu Niu; Andy Peng Xiang; Weizhen Fang; Weizhi Ji; Wei Li; Xiaoyang Zhao; Qi Zhou

One-step generation of p53 gene biallelic mutant Cynomolgus monkey via the CRISPR/Cas system


Proceedings of the National Academy of Sciences of the United States of America | 2010

Transgenic rhesus monkeys produced by gene transfer into early-cleavage-stage embryos using a simian immunodeficiency virus-based vector

Yuyu Niu; Yang Yu; Agnieszka Bernat; Shihua Yang; Xiechao He; Xiangyu Guo; Dongliang Chen; Yongchang Chen; Shaohui Ji; Wei Si; Yongqin Lv; Tao Tan; Qiang Wei; Hong Wang; Lei Shi; Jean Guan; Xuemei Zhu; Marielle Afanassieff; Pierre Savatier; Kang Zhang; Qi Zhou; Weizhi Ji

The development of transgenic technologies in monkeys is important for creating valuable animal models of human physiology so that the etiology of diseases can be studied and potential therapies for their amelioration may be developed. However, the efficiency of producing transgenic primate animals is presently very low, and there are few reports of success. We have developed an improved methodology for the production of transgenic rhesus monkeys, making use of a simian immunodeficiency virus (SIV)-based vector that encodes EGFP and a protocol for infection of early-cleavage–stage embryos. We show that infection does not alter embryo development. Moreover, the timing of infection, either before or during embryonic genome activation, has no observable effect on the level and stability of transgene expression. Of 70 embryos injected with concentrated virus at the one- to two-cell stage or the four- to eight-cell stage and showing fluorescence, 30 were transferred to surrogate mothers. One transgenic fetus was obtained from a fraternal triple pregnancy. Four infant monkeys were produced from four singleton pregnancies, of which two expressed EGFP throughout the whole body. These results demonstrate the usefulness of SIV-based lentiviral vectors for the generation of transgenic monkeys and improve the efficiency of transgenic technology in nonhuman primates.


Journal of Biological Chemistry | 2008

Dissecting Signaling Pathways That Govern Self-renewal of Rabbit Embryonic Stem Cells

Shufen Wang; Yi Shen; Xiaohua Yuan; Kai Chen; Xiangyu Guo; Yongchang Chen; Yuyu Niu; Jian Li; Ren-He Xu; Xiyun Yan; Qi Zhou; Weizhi Ji

The pluripotency and self-renewal of embryonic stem cells (ESC) are regulated by a variety of cytokines/growth factors with some species differences. We reported previously that rabbit ESC (rESC) are more similar to primate ESC than to mouse ESC. However, the signaling pathways that regulate rESC self-renewal had not been identified. Here we show that inhibition of the transforming growth factor β (TGFβ), fibroblast growth factor (FGF), and canonical Wnt/β-catenin (Wnt) pathways results in enhanced differentiation of rESC accompanied by down-regulation of Smad2/3 phosphorylation and β-catenin expression and up-regulation of phosphorylation of Smad1 and β-catenin. These results imply that the TGFβ, FGF, and Wnt pathways are required for rESC self-renewal. Inhibition of the MAPK/ERK and PI3K/AKT pathways, which lie downstream of the FGF pathway, led to differentiation of rESC accompanied by down-regulation of phosphorylation of ERK1/2 or AKT, respectively. Long-term self-renewal of rESC could be achieved by adding a mixture of TGFβ ligands (activin A, Nodal, or TGFβ1) plus basic FGF (bFGF) and Noggin in the absence of serum and feeder cells. Our findings also suggest that there is a regulatory network consisting of the FGF, Wnt, and TGFβ pathways that controls rESC pluripotency and self-renewal. We conclude that bFGF controls the stem cell properties of rESC both directly and indirectly through TGFβ or other pathways, whereas the effect of Wnt on rESC might be mediated by the TGFβ pathway.


Human Molecular Genetics | 2015

Early Parkinson's disease symptoms in α-synuclein transgenic monkeys

Yuyu Niu; Xiangyu Guo; Yongchang Chen; Chuan En Wang; Jinquan Gao; Weili Yang; Yu Kang; Wei Si; Hong Wang; Shang Hsun Yang; Shihua Li; Weizhi Ji; Xiao-Jiang Li

Parkinsons disease (PD) is an age-dependent neurodegenerative disease that can be caused by genetic mutations in α-synuclein (α-syn) or duplication of wild-type α-syn; PD is characterized by the deposition of α-syn aggregates, indicating a gain of toxicity from accumulation of α-syn. Although the major neuropathologic feature of PD is the degeneration of dopaminergic (DA) neurons in the substantia nigra, non-motor symptoms including anxiety, cognitive defect and sleep disorder precede the onset of motor impairment, and many clinical symptoms of PD are not caused by degeneration of DA neurons. Non-human primate models of PD are important for revealing the early pathology in PD and identifying effective treatments. We established transgenic PD rhesus monkeys that express mutant α-syn (A53T). Six transgenic A53T monkeys were produced via lentiviral vector expressing A53T in fertilized monkey eggs and subsequent embryo transfer to surrogates. Transgenic A53T is expressed in the monkey brain and causes age-dependent non-motor symptoms, including cognitive defects and anxiety phenotype, without detectable sleeping disorders. The transgenic α-syn monkeys demonstrate the specific early symptoms caused by mutant α-syn and provide insight into treatment of early PD.

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Weizhi Ji

Kunming University of Science and Technology

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Yongchang Chen

Kunming University of Science and Technology

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Wei Si

Kunming Institute of Zoology

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Qi Zhou

Chinese Academy of Sciences

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Hong Wang

Kunming Institute of Zoology

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Shaohui Ji

Kunming Institute of Zoology

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Xiechao He

Kunming Institute of Zoology

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Shihua Yang

Kunming Institute of Zoology

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Tao Tan

Kunming Institute of Zoology

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Xianghui Tang

Kunming Institute of Zoology

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