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Dive into the research topics where Zinaida I. Kravchuk is active.

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Featured researches published by Zinaida I. Kravchuk.


FEBS Letters | 1995

Thermodynamic and functional characterization of a stable IgG conformer obtained by renaturation from a partially structured low pH-induced state.

Sergey P. Martsev; Zinaida I. Kravchuk; Alexander P. Vlasov; Georgy V. Lyakhnovich

At pH 2, rabbit IgG adopts a partially structured state that exhibits loss of thermal unfolding transition, tentatively assigned to the CH2 domain, whilst retaining a well‐defined tertiary structure for the rest of the molecule and extensive secondary structure. Renaturation of IgG from this state yields a stable conformer that differs from native IgG by a lower degree of interaction between the CH2 and CH3 domains, and stronger interaction between the CH1 and CH2 domains, as judged by differential scanning calorimetry and probing the IgG conformation with specific ligands (C1q component of complement, protein A and monospecific antibodies to the CH2 domain and hinge region).


Journal of Immunological Methods | 1995

Modification of monoclonal and polyclonal IgG with palladium (II) coproporphyrin I: stimulatory and inhibitory functional effects induced by two different methods

Sergey P. Martsev; Valery A. Preygerzon; Yanina I. Mel'nikova; Zinaida I. Kravchuk; Gely V. Ponomarev; Vitaly E. Lunev; Alexander P. Savitsky

Antibodies conjugated with porphyrins and metalloporphyrins have a great potential for applications in fluorescence or phosphorescence immunoassays as well as in photodynamic therapy, radioimaging and internal radiation therapy of cancer. Here we describe how the new preactivated metalloporphyrin, palladium (II) coproporphyrin I-tetra-N-hydroxysuccinimide ester, can be covalently attached to mouse monoclonal and rabbit anti-human ferritin antibodies. The advantages of the proposed reagent over the previously reported carboxylic porphyrins coupled through carbodiimide activation are indicated. Conformational changes in antibodies caused by each of the two methods were assessed from their binding to the antigen (a probe for the antibody Fv domain) and anti-IgG antibodies probing the global conformation of the CH2 domain in the Fc fragment. Porphyrin coupling through carbodiimide activation resulted in a decrease in both functional activities of modified antibodies even at low levels of modification. In contrast, when the N-hydroxysuccinimide (NHS) derivative of porphyrin was used, enhancement of the antigen-binding affinity of porphyrin-antibody conjugates occurred due to an increase in the conformational mobility (flexibility) of the modified antibodies. The stimulatory effect of conjugation was maximal when one porphyrin molecule was coupled to an antibody molecule. Coupling of NHS-activated porphyrin at pH 7.4, 7.8 and pH 8.5 suggested that the high efficiency of the reaction at pH 8.5 could be attributed predominantly to the formation of antibody aggregates, only 50% of which were covalently cross-linked. The lowest percentage of aggregates in porphyrin-antibody conjugates was found at pH 7.4 and a molar reagent-to-protein ratio in the 10:1-40:1 range. Thus, the use of the NHS-activated carboxylic porphyrin provides a mild, simple and convenient procedure for preparing antibody conjugates with enhanced antigen-binding affinity.


Immunology Letters | 1994

Large increase in thermal stability of the CH2 domain of rabbit IgG after acid treatment as evidenced by differential scanning calorimetry.

Sergey P. Martsev; Zinaida I. Kravchuk; Alexander P. Vlasov

Rabbit IgG after exposure to 0.05 M glycine-HCl, pH 2.0, and native IgG were compared by differential scanning calorimetry (DSC) at pH 3.5 and C1q binding studies at pH 7.8. For acid-treated IgG, a large increase (by approx. 12-15 degrees C) in thermal stability of the CH2 domain occurs and this domain no longer demonstrates a separate and thermodynamically independent unfolding at 56 degrees C seen for native IgG. The results suggest that stabilization of the CH2 domain in acid-treated IgG arises from stronger, relative to the native protein, interaction of the CH2 domain with adjacent and more stable IgG domain(s). Conformational differences of the two forms of IgG were confirmed at neutral pH by a 4-fold increase of C1q-binding affinity of acid-treated IgG.


Journal of Structural Biology | 2002

Antiferritin VL homodimer binds human spleen ferritin with high specificity

Yvonne Nymalm; Zinaida I. Kravchuk; Tiina Salminen; Alexander A. Chumanevich; Anatoly P. Dubnovitsky; Jussi Kankare; Olli T. Pentikäinen; Jukka V. Lehtonen; Paolo Arosio; Sergey P. Martsev; Mark S. Johnson

The antiferritin variable light domain (VL) dimer binds human spleen ferritin ( approximately 85% L subunits) but with approximately 50-fold lower affinity, K(a)=4 x 10(7) x M(-1), than the parent F11 antibody (K(a)=2.1 x 10(9) x M(-1)). The VL dimer does not recognize either rL (100% L subunits) or rH (100% H subunits) human ferritin, whereas the parent antibody recognizes rL-ferritin. To help explain the differences in ferritin binding affinities and specificities, the crystal structure of the VL domain (2.8A resolution) was determined by molecular replacement and models of the antiferritin VL-VH dimer were made on the basis of antilysozyme antibody D1.3. The domain interface is smaller in the VL dimer but a larger number of interdomain hydrogen bonds may prevent rearrangement on antigen binding. The antigen binding surface of the VL dimer is flatter, lacking a negatively charged pocket found in the VL-VH models, contributed by the CDR3 loop of the VH domain. Loop CDR2 (VL dimer) is located away from the antigen binding site, while the corresponding loop of the VH domain would be located within the antigen binding site. Together these differences lead to 50-fold lower binding affinity in the VL dimer and to more restricted specificity than is seen for the parent antibody.


Protein Engineering Design & Selection | 2004

Fusion of the antiferritin antibody VL domain to barnase results in enhanced solubility and altered pH stability

Sergey P. Martsev; Yaroslav Tsybovsky; Oleg A. Stremovskiy; Sergey G. Odintsov; Taras Balandin; Paolo Arosio; Zinaida I. Kravchuk; Sergey M. Deyev


Biochemistry | 2000

Antiferritin single-chain Fv fragment is a functional protein with properties of a partially structured state: comparison with the completely folded V(L) domain.

Sergey P. Martsev; Alexander A. Chumanevich; Alexander P. Vlasov; Anatoly P. Dubnovitsky; Yaroslav Tsybovsky; Sergey M. Deyev; Anna Cozzi; Paolo Arosio; Zinaida I. Kravchuk


Biochemistry | 2000

Expression, Refolding, and Ferritin-Binding Activity of the Isolated VL-Domain of Monoclonal Antibody F11

Anatoly P. Dubnovitsky; Zinaida I. Kravchuk; Alexander A. Chumanevich; Anna Cozzi; Paolo Arosio; Sergey P. Martsev


Biochemistry | 1996

[Non-native conformational states of immunoglobulins: thermodynamic and functional analysis of rabbit IgG].

Alexander P. Vlasov; Zinaida I. Kravchuk; Sergey P. Martsev


Biochemistry | 2000

Antigen-binding activity of monoclonal antibodies after incubation with organic solvents.

Melnikova Yi; Odintsov Sg; Zinaida I. Kravchuk; Sergey P. Martsev


Protein Engineering | 2001

Truncated aspartate aminotransferase from alkalophilic Bacillus circulans with deletion of N-terminal 32 amino acids is a non-functional monomer in a partially structured state

Zinaida I. Kravchuk; Yaroslav Tsybovsky; Marianne Koivulehto; Alexander P. Vlasov; Alexander A. Chumanevich; Natalia Battchikova; Sergey P. Martsev; Timo Korpela

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Sergey P. Martsev

National Academy of Sciences of Belarus

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Alexander P. Vlasov

National Academy of Sciences of Belarus

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Alexander A. Chumanevich

National Academy of Sciences of Belarus

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Anatoly P. Dubnovitsky

National Academy of Sciences of Belarus

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Yaroslav Tsybovsky

Case Western Reserve University

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Anna Cozzi

Vita-Salute San Raffaele University

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Sergey M. Deyev

Russian Academy of Sciences

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V. V. Grinev

Belarusian State University

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Michael P. Potapnev

Laboratory of Molecular Biology

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