Achim Guckenberger
University of Bayreuth
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Publication
Featured researches published by Achim Guckenberger.
Physical Review E | 2016
Abdallah Daddi-Moussa-Ider; Achim Guckenberger; Stephan Gekle
The physical approach of a small particle (virus, medical drug) to the cell membrane represents the crucial first step before active internalization and is governed by thermal diffusion. Using a fully analytical theory we show that the stretching and bending of the elastic membrane by the approaching particle induces a memory in the system, which leads to anomalous diffusion, even though the particle is immersed in a purely Newtonian liquid. For typical cell membranes the transient subdiffusive regime extends beyond 10 ms and can enhance residence times and possibly binding rates up to 50%. Our analytical predictions are validated by numerical simulations.
Journal of Physics: Condensed Matter | 2017
Achim Guckenberger; Stephan Gekle
Cell membranes are vital to shield a cells interior from the environment. At the same time they determine to a large extent the cells mechanical resistance to external forces. In recent years there has been considerable interest in the accurate computational modeling of such membranes, driven mainly by the amazing variety of shapes that red blood cells and model systems such as vesicles can assume in external flows. Given that the typical height of a membrane is only a few nanometers while the surface of the cell extends over many micrometers, physical modeling approaches mostly consider the interface as a two-dimensional elastic continuum. Here we review recent modeling efforts focusing on one of the computationally most intricate components, namely the membranes bending resistance. We start with a short background on the most widely used bending model due to Helfrich. While the Helfrich bending energy by itself is an extremely simple model equation, the computation of the resulting forces is far from trivial. At the heart of these difficulties lies the fact that the forces involve second order derivatives of the local surface curvature which by itself is the second derivative of the membrane geometry. We systematically derive and compare the different routes to obtain bending forces from the Helfrich energy, namely the variational approach and the thin-shell theory. While both routes lead to mathematically identical expressions, so-called linear bending models are shown to reproduce only the leading order term while higher orders differ. The main part of the review contains a description of various computational strategies which we classify into three categories: the force, the strong and the weak formulation. We finally give some examples for the application of these strategies in actual simulations.
Physics of Fluids | 2016
Abdallah Daddi-Moussa-Ider; Achim Guckenberger; Stephan Gekle
We study the motion of a solid particle immersed in a Newtonian fluid and confined between two parallel elastic membranes possessing shear and bending rigidity. The hydrodynamic mobility depends on the frequency of the particle motion due to the elastic energy stored in the membrane. Unlike the single-membrane case, a coupling between shearing and bending exists. The commonly used approximation of superposing two single-membrane contributions is found to give reasonable results only for motions in the parallel, but not in the perpendicular direction. We also compute analytically the membrane deformation resulting from the motion of the particle, showing that the presence of the second membrane reduces deformation. Using the fluctuation-dissipation theorem we compute the Brownian motion of the particle, finding a long-lasting subdiffusive regime at intermediate time scales. We finally assess the accuracy of the employed point-particle approximation via boundary-integral simulations for a truly extended particle. They are found to be in excellent agreement with the analytical predictions.
New Journal of Physics | 2015
Badr Kaoui; Achim Guckenberger; Alexei Krekhov; Falko Ziebert; Walter Zimmermann
A new class of pattern forming systems is identified and investigated: anisotropic systems that are spatially inhomogeneous along the direction perpendicular to the preferred one. By studying the generic amplitude equation of this new class and a model equation, we show that branched stripe patterns emerge, which for a given parameter set are stable within a band of different wavenumbers and different numbers of branching points (defects). Moreover, the branched patterns and unbranched ones (defect-free stripes) coexist over a finite parameter range. We propose two systems where this generic scenario can be found experimentally, surface wrinkling on elastic substrates and electroconvection in nematic liquid crystals, and relate them to the findings from the amplitude equation.
Computer Physics Communications | 2016
Achim Guckenberger; Marcel P. Schraml; Paul G. Chen; Marc Leonetti; Stephan Gekle
Soft Matter | 2018
Achim Guckenberger; Alexander Kihm; Thomas John; Christian Wagner; Stephan Gekle
Applied Physics Letters | 2017
S. Quint; A. F. Christ; Achim Guckenberger; S. Himbert; Lars Kaestner; Stephan Gekle; Christian Wagner
Journal of Fluid Mechanics | 2018
Achim Guckenberger; Stephan Gekle
arXiv: Biological Physics | 2016
Achim Guckenberger; Stephan Gekle
Archive | 2016
Abdallah Daddi-Moussa-Ider; Achim Guckenberger; Stephan Gekle