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Dive into the research topics where Amanda R. Magli is active.

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Featured researches published by Amanda R. Magli.


Blood | 2012

IGHV-unmutated and IGHV-mutated chronic lymphocytic leukemia cells produce activation-induced deaminase protein with a full range of biologic functions

Piers E.M. Patten; Charles C. Chu; Emilia Albesiano; Rajendra N. Damle; Xiao Jie Yan; Dorothy Kim; Lu Zhang; Amanda R. Magli; Jacqueline Barrientos; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Sergio Roa; Patricia K. A. Mongini; Thomas MacCarthy; Matthew D. Scharff; Nicholas Chiorazzi

Clonal evolution occurs during the course of chronic lymphocytic leukemia (CLL) and activation-induced deaminase (AID) could influence this process. However, this possibility has been questioned in CLL because the number of circulating AID mRNA(+) cells is exceedingly low; synthesis of AID protein by blood CLL cells has not been demonstrated; the full range of AID functions is lacking in unmutated CLL (U-CLL), and no prospective analysis linking AID expression and disease severity has been reported. The results of the present study show that circulating CLL cells and those within secondary lymphoid tissues can make AID mRNA and protein. This production is related to cell division because more AID mRNA was detected in recently divided cells and AID protein was limited to the dividing fraction and was up-regulated on induction of cell division. AID protein was functional because AID(+) dividing cells exhibited more double-stranded DNA breaks, IGH class switching, and new IGHV-D-J mutations. Each of these actions was documented in U-CLL and mutated CLL (M-CLL). Furthermore, AID protein was associated with worse patient outcome and adverse cytogenetics. We conclude that the production of fully functional AID protein by U-CLL and M-CLL cells could be involved in clonal evolution of the disease.


Molecular Medicine | 2011

Torque Teno Virus 10 Isolated by Genome Amplification Techniques from a Patient with Concomitant Chronic Lymphocytic Leukemia and Polycythemia Vera

Charles C. Chu; Lu Zhang; Arjun Dhayalan; Briana M. Agagnina; Amanda R. Magli; Gia Fraher; Sebastien Didier; Linda P. Johnson; William J. Kennedy; Rajendra N. Damle; Xiao Jie Yan; Piers E.M. Patten; Saul Teichberg; Prasad Koduru; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Nicholas Chiorazzi

An infectious etiology has been proposed for many human cancers, but rarely have specific agents been identified. One difficulty has been the need to propagate cancer cells in vitro to produce the infectious agent in detectable quantity. We hypothesized that genome amplification from small numbers of cells could be adapted to circumvent this difficulty. A patient with concomitant chronic lymphocytic leukemia (CLL) and polycythemia vera (PV) requiring therapeutic phlebotomy donated a large amount of phlebotomized blood to test this possibility. Using genome amplification methods, we identified a new isolate (BIS8-17) of torque teno virus (TTV) 10. The presence of blood isolate sequence 8–17 (BIS8-17) in the original plasma was confirmed by polymerase chain reaction (PCR), validating the approach, since TTV is a known plasma virus. Subsequent PCR testing of plasmas from additional patients showed that BIS8-17 had a similar incidence (~20%) in CLL (n = 48) or PV (n = 10) compared with healthy controls (n = 52). CLL cells do not harbor BIS8-17; PCR did not detect it in CLL peripheral blood genomic deoxyribonucleic acid (DNA) (n = 20). CLL patient clinical outcome or prognostic markers (immunoglobulin heavy chain variable region [IGHV] mutation, CD38 or zeta-chain associated protein kinase 70kDa [ZAP-70]) did not correlate with BIS8-17 infection. Although not causative to our knowledge, this is the first reported isolation and detection of TTV in either CLL or PV. TTV could serve as a covirus with another infectious agent or TTV variant with rearranged genetic components that contribute to disease pathogenesis. These results prove that this method identifies infectious agents and provides an experimental methodology to test correlation with disease.


Molecular Medicine | 2017

Binding of CLL subset 4 B-cell receptor immunoglobulins to viable human memory B lymphocytes requires a distinctive IGKV somatic mutation.

Rosa Catera; Yan Liu; Chao Gao; Xiao-Jie Yan; Amanda R. Magli; Steven L. Allen; Jonathan E. Kolitz; Kanti R. Rai; Charles C. Chu; Ten Feizi; Kostas Stamatopoulos; Nicholas Chiorazzi

Amino acid replacement mutations in certain chronic lymphocytic leukemia (CLL) stereotyped B cell receptor (BCR) immunoglobulins (IGs) at defined positions within antigen-binding sites strongly imply antigen selection. Prime examples of this are CLL subset 4 BCR IGs using IGHV4-34/IGHD5-18/IGHJ6 and IGKV2-30/IGKJ2 rearrangements. Conspicuously, and unlike most CLL IGs, subset 4 IGs do not bind apoptotic cells. By testing the (auto)antigenic reactivities of subset 4 IGs toward viable lymphoid-lineage cells and specific autoantigens typically bound by IGHV4-34+ IGs, we found that IGs from both subset 4 and non-subset 4 IGHV4-34-expressing CLL cases bound naïve B cells. However, only subset 4 IGs reacted with memory B cells. Furthermore, subset 4 IGs did not bind DNA nor i or I carbohydrate antigens that are common targets of IGHV4-34-utilizing antibodies in systemic lupus erythematosus and cold agglutinin disease, respectively. Notably, we found that subset 4 IG binding to memory B lymphocytes depends on an aspartic acid at position 66 of FR3 in the rearranged IGKV2-30 gene; this amino acid residue is acquired by somatic mutation. Our findings illustrate the importance of positive and negative selection criteria for structural elements in CLL IGs and suggest that autoantigens driving normal B cells to become subset 4 CLL cells differ from those driving IGHV4-34+ B cells in other diseases.


Leukemia | 2016

Cytoplasmic myosin-exposed apoptotic cells appear with caspase-3 activation and enhance CLL cell viability

Xiaoxuan Cui; Lu Zhang; Amanda R. Magli; Rosa Catera; Xiao-Jie Yan; Daniel O. Griffin; Thomas L. Rothstein; Jacqueline Barrientos; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Nicholas Chiorazzi; Charles C. Chu

The degree of chronic lymphocytic leukemia (CLL) B-cell antigen receptor (BCR) binding to myosin-exposed apoptotic cells (MEACs) correlates with worse patient outcomes, suggesting a link to disease activity. Therefore, we studied MEAC formation and the effects of MEAC binding on CLL cells. In cell line studies, both intrinsic (spontaneous or camptothecin-induced) and extrinsic (FasL- or anti-Fas-induced) apoptosis created a high percent of MEACs over time in a process associated with caspase-3 activation, leading to cytoplasmic myosin cleavage and trafficking to cell membranes. The involvement of common apoptosis pathways suggests that most cells can produce MEACs and indeed CLL cells themselves form MEACs. Consistent with the idea that MEAC formation may be a signal to remove dying cells, we found that natural IgM antibodies bind to MEACs. Functionally, co-culture of MEACs with CLL cells, regardless of immunoglobulin heavy-chain variable region gene mutation status, improved leukemic cell viability. Based on inhibitor studies, this improved viability involved BCR signaling molecules. These results support the hypothesis that stimulation of CLL cells with antigen, such as those on MEACs, promotes CLL cell viability, which in turn could lead to progression to worse disease.


Blood | 2010

Somatic Hypermutation In Stereotyped Subset 4 BCRs/mAbs of CLL Patients, Expressing IGHV4-34 gene, Edit Anti-DNA Reactivity

Rosa Catera; Amanda R. Magli; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Charles C. Chu; Kostas Stamatopoulos; Nicholas Chiorazzi


Blood | 2012

CLL Cell Viability Promoted by Myosin Heavy Chain IIA Exposed Apoptotic Cells is BTK-dependent

Charles C. Chu; Lu Zhang; Xiaoxuan Cui; Amanda R. Magli; Xiao-Jie Yan; Jonathan E. Kolitz; Steven L. Allen; Jacqueline C. Barrientos; Kanti R. Rai; Nicholas Chiorazzi


Clinical Lymphoma, Myeloma & Leukemia | 2011

4.14 Activation-Induced Cytidine Deaminase Expression and Function in CLL is an Independent Risk Factor for Poor Patient Outcome

Charles C. Chu; Piers E.M. Patten; Dorothy Kim; Emilia Albesiano; Lu Zhang; Amanda R. Magli; Linda P. Johnson; Xiao-Jie Yan; Rajendra N. Damle; Shabirul Haque; Patricia K. A. Mongini; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Nicholas Chiorazzi


Blood | 2011

Co-Culture of CLL Cells with MEACs (Myosin Heavy Chain IIA Exposed Apoptotic Cells) Promotes Viability of Leukemic Clones

Charles C. Chu; Xiaoxuan Cui; Rosa Catera; Lu Zhang; Amanda R. Magli; Xiao-Jie Yan; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Nicholas Chiorazzi


Journal of Immunology | 2010

Natural antibodies recognize cytoplasmic myosin that is cleaved and transferred to the cell membrane during apoptosis

Xiaoxuan Cui; Lu Zhang; Amanda R. Magli; Rosa Catera; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Nicholas Chiorazzi; Charles C. Chu


Blood | 2010

Some CLL Cells Bind Myosin-Exposed Apoptotic Cells. Exposure of Cytoplasmic Myosin Results From Transfer of Caspase-3 Dependent Cleavage Products to the Outer Cell Membrane

Xiaoxuan Cui; Lu Zhang; Amanda R. Magli; Rosa Catera; Jonathan E. Kolitz; Steven L. Allen; Kanti R. Rai; Nicholas Chiorazzi; Charles C. Chu

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Charles C. Chu

The Feinstein Institute for Medical Research

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Kanti R. Rai

North Shore-LIJ Health System

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Nicholas Chiorazzi

The Feinstein Institute for Medical Research

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Lu Zhang

The Feinstein Institute for Medical Research

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Rosa Catera

North Shore-LIJ Health System

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Xiao-Jie Yan

The Feinstein Institute for Medical Research

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Xiaoxuan Cui

North Shore-LIJ Health System

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Rajendra N. Damle

The Feinstein Institute for Medical Research

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