Amir Zuker

Modification of flower color and fragrance by antisense suppression of the flavanone 3-hydroxylase gene

Anthocyanins are the major pigments contributing to carnation flowercoloration. Most carnation varieties are sterile and hence molecular breedingis an attractive approach to creating novel colors in this commercially importantcrop. Characterization of anthocyanins in the flowers of the modern carnationcv. Eilat revealed that only the orange pelargonidin accumulates, due to a lackof both flavonoid 3′,5′-hydroxylase and flavonoid3′-hydroxylase activities. To modify flower color in cv. Eilat, we usedantisense suppression to block the expression of a gene encoding flavanone3-hydroxylase, a key step in the anthocyanin pathway. The transgenic plantsexhibited flower color modifications ranging from attenuation to complete lossof their original orange/reddish color. In the latter, only traces ofpelargonidin were detected. Dramatic suppression of flavanone 3-hydroxylaselevel/activity in these transgenes was confirmed by northern blot, RT-PCR andenzymatic assays. The new phenotype has been stable for over 4 years ofvegetative propagation. Moreover, transgenic plants with severe colormodification were more fragrant than control plants. GC-MS headspace analysesrevealed that transgenic anti-f3h flowers emit higherlevels of methyl benzoate. The possible interrelation between pathways leadingto anthocyanin and fragrance production is discussed.

Forest-tree biotechnology: genetic transformation and its application to future forests

The wide use of forest-tree products and the progressive deterioration of natural forests mean that foresters can no longer rely on the exploitation of existing forests. Extensive accelerated-breeding programs are needed for reforestation and to improve existing forest-tree species. Plant genetic-transformation techniques and gene isolation and characterization are no longer serious problems; forest-tree species should be a major target for commercial genetic engineering and molecular breeding. We discuss some problems in forest-tree breeding and summarize developments in the transformation of tree species, including possible applications for improving and introducing novel traits into forest tree-species.

Nontransgenic Genome Modification in Plant Cells

Zinc finger nucleases (ZFNs) are a powerful tool for genome editing in eukaryotic cells. ZFNs have been used for targeted mutagenesis in model and crop species. In animal and human cells, transient ZFN expression is often achieved by direct gene transfer into the target cells. Stable transformation, however, is the preferred method for gene expression in plant species, and ZFN-expressing transgenic plants have been used for recovery of mutants that are likely to be classified as transgenic due to the use of direct gene-transfer methods into the target cells. Here we present an alternative, nontransgenic approach for ZFN delivery and production of mutant plants using a novel Tobacco rattle virus (TRV)-based expression system for indirect transient delivery of ZFNs into a variety of tissues and cells of intact plants. TRV systemically infected its hosts and virus ZFN-mediated targeted mutagenesis could be clearly observed in newly developed infected tissues as measured by activation of a mutated reporter transgene in tobacco (Nicotiana tabacum) and petunia (Petunia hybrida) plants. The ability of TRV to move to developing buds and regenerating tissues enabled recovery of mutated tobacco and petunia plants. Sequence analysis and transmission of the mutations to the next generation confirmed the stability of the ZFN-induced genetic changes. Because TRV is an RNA virus that can infect a wide range of plant species, it provides a viable alternative to the production of ZFN-mediated mutants while avoiding the use of direct plant-transformation methods.

Linalool and linalool oxide production in transgenic carnation flowers expressing the Clarkia breweri linalool synthase gene

Most modern cut-flower cultivars, including those of carnation(Dianthus caryophyllus), lack distinct fragrance.Carnationcv. Eilat flowers produce and emit various fragrance compounds, includingbenzoic acid derivatives and sesquiterpenes, but not monoterpenes. Based onGC-MS analysis, benzoic acid, benzyl benzoate, phenylethyl benzoate, methylbenzoate, cis-3-hexenyl benzoate and β-caryophylleneare the major fragrance compounds, representing ca. 60% of the total volatilesgenerated by these flowers. The level of these compounds increases dramaticallyduring petal development. To evaluate the possibility of producing monoterpenesin carnation cv. Eilat, we generated transgenic plants expressing the linaloolsynthase gene from Clarkia breweri under the regulation ofthe CaMV 35S constitutive promoter. The product of this gene catalyzes theproduction of the monoterpene linalool from geranyl diphosphate. HeadspaceGC-MSanalysis revealed that leaves and flowers of transgenic, but not controlplants,emit linalool and its derivatives, cis- andtrans-linalool oxide. GC-MS analysis of petal extractrevealed the accumulation of trans-linalool oxide but notlinalool. The emission of linalool by the transgenic flowers did not lead todetectable changes in flower scent for human olfaction.

Transgenic Populus tremula: a step-by-step protocol for its Agrobacterium-mediated transformation

In recent years, Populus species have acquired an important place in basic and applied research of woody plants. The practical role of Populus species in world forestry and their importance to research as a woody-plant model have led to increasing interest in tissue-culture and molecular techniques, as well as the development of transformation procedures for this genus. A simple technical procedure is described here step-by-step, for the first time, as a routine method for transforming Populus tremula using a disarmed Agrobacterium tumefaciens hypervirulent strain. The procedure begins with the inoculation of stem explants with bacterial suspension, followed by a short period of co-cultivation on a highly regenerative medium. Transformed shoots are selected on regeneration medium containing antibiotics and the presence of the inserted target genes is checked using a rapid and efficient PCR test. Selected shoots are transferred to a rooting medium, under the same selection pressure, and propagated via stem cuttings. Selected plants can be hardened and transferred to the green-house within 4 months of inoculation. The method has proven efficient for several gene constructs, selection on Kan or Hyg, and three different Agrobacterium strains.

Genome modifications in plant cells by custom-made restriction enzymes.

Genome editing, i.e. the ability to mutagenize, insert, delete and replace sequences, in living cells is a powerful and highly desirable method that could potentially revolutionize plant basic research and applied biotechnology. Indeed, various research groups from academia and industry are in a race to devise methods and develop tools that will enable not only site-specific mutagenesis but also controlled foreign DNA integration and replacement of native and transgene sequences by foreign DNA, in living plant cells. In recent years, much of the progress seen in gene targeting in plant cells has been attributed to the development of zinc finger nucleases and other novel restriction enzymes for use as molecular DNA scissors. The induction of double-strand breaks at specific genomic locations by zinc finger nucleases and other novel restriction enzymes results in a wide variety of genetic changes, which range from gene addition to the replacement, deletion and site-specific mutagenesis of endogenous and heterologous genes in living plant cells. In this review, we discuss the principles and tools for restriction enzyme-mediated gene targeting in plant cells, as well as their current and prospective use for gene targeting in model and crop plants.

Wounding by bombardment yields highly efficient Agrobacterium-mediated transformation of carnation (Dianthus caryophyllus L.)

Highly efficient Agrobacterium-mediated transformation of carnation (Dianthus caryophyllus L.) was obtained by first wounding stem explants via microprojectile bombardment. When this was followed by cocultivation with disarmed Agrobacterium in the dark, the transformation frequency-based on transient GUS expression-increased to over 10-fold that of explants wounded by other means and cocultivated under constant light. Two cycles of regeneration/selection on kanamycin were employed to generate stably transformed carnation plants and eliminate chimeras: first, plantlets were regenerated from inoculated stem explants and then leaves from these plantlets were used to generate transgenes in a second selection cycle of adventitious shoot regeneration. Agrobacterium strain AGLO, carrying the binary vector pCGN7001 containing uidA and nptII genes, was used in the stable transformation experiments. The combination of wounding via bombardment, cocultivation in the dark and two cycles of kanamycin selection yielded an overall transformation efficiency of 1–2 transgenes per 10 stem explants for the three carnation varieties analyzed. Histochemical and molecular analyses of marker genes in T0 and T1 generations confirmed the transgenic nature of the selected plants.

Transformation of carnation by microprojectile bombardment

Abstract Transgenic carnation (Dianthus caryophyllus L.) plants were produced by microprojectile bombardment of highly regenerative stem segments. A two-step regeneration procedure based on the use of two different cytokinins—6-benzylaminopurine and thidiazuron—was employed for the production of adventitious shoots from stem segments. The size of the original stem was found to affect the regeneration efficiency of stem segments: the highest efficiency of adventitious shoot regeneration was obtained with segments originating from stems with two mature leaves, as compared to those with four, six or eight mature leaves. The tissue culture procedure was shown to be suitable for a number of standard and spray cultivars. Bombardment of cultivar “White Sim” stem segments was performed with a plasmid containing uidA and bar genes encoding β-glucuronidase and phosphinothricin-acetyltransferase, respectively. Transformation frequency was determined, based on the transient expression of uidA in stem segments. Following selection in the presence of the herbicide bialaphos, about 70 plantlets per 100 stem segments were recovered. Upon analysis, about 3% of these recovered plantlets exhibited strong stable uidA expression throughout the plant. Presence of the bar gene in plants stably expressing uidA was confirmed by Southern blot analysis.

CHRD, a plant member of the evolutionarily conserved YjgF family, influences photosynthesis and chromoplastogenesis.

Studies on the carotenoid-overaccumulating structures in chromoplasts have led to the characterization of proteins termed plastid lipid-associated proteins (PAPs), involved in the sequestration of hydrophobic compounds. Here we characterize the PAP CHRD, which, based on sequence homology, belongs to a highly conserved group of proteins, YER057c/YjgF/UK114, involved in the regulation of basic and vital cellular processes in bacteria, yeast and animals. Two nuclear genes were characterized in tomato plants: one (LeChrDc) is constitutively expressed in various tissues and the other (LeChrDi) is induced by stress in leaves and is upregulated by developmental cues in floral tissues. Using RNAi and antisense approaches, we show their involvement in biologically significant processes such as photosynthesis. The quantum yield of photosynthetic electron flow in transgenic tomato leaves with suppressed LeChrDi/c expression was 30–50% of their control, non-transgenic counterparts and was ascribed to lower PSI activity. Transgenic flowers with suppressed LeChrDi/c also accumulated up to 30% less carotenoids per unit protein as compared to control plants, indicating an interrelationship between PAPs and floral-specific carotenoid accumulation in chromoplasts. We suggest that CHRD’s role in the angiosperm reproductive unit may be a rather recent evolutionary development; its original function may have been to protect the plant under stress conditions by preserving plastid functionality.

The rolC gene in carnation exhibits cytokinin- and auxin-like activities

The overexpression of the rolC gene of the Ri plasmid of Agrobacterium rhizogenes in transgenic plants alters their development. Few studies have been performed on adventitious shoot or root formation in rolC-transformed plants. In this study we evaluated a possible cytokinin-like and auxin-like effect on shoot and root regeneration from petals and leaves of four lines of rolC-transgenic carnation plants (Dianthus caryophyllus L. cv. White Sim). rolC was found to enhance shoot regeneration, by increasing either the number of shoots per regenerative explant, or the number of shoot-forming explants. Remarkable root regeneration, in a medium with only auxin, was obtained from rolC explants, due to the increased percentage of root-forming explants. Our results show that rolC exhibits both cytokinin-like and auxin-like activities in rolC-transgenic carnation tissues.