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Dive into the research topics where Andy VanLoocke is active.

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Featured researches published by Andy VanLoocke.


Gcb Bioenergy | 2010

The impacts of Miscanthus×giganteus production on the Midwest US hydrologic cycle

Andy VanLoocke; Carl J. Bernacchi; Tracy E. Twine

Perennial grasses are being considered as candidates for biofuel feedstocks to provide an alternative energy source to fossil fuels. Miscanthus×giganteus (miscanthus), in particular, is a grass that is predicted to provide more energy per sown area than corn ethanol and reduce net carbon dioxide emissions by increasing the storage of carbon belowground. Miscanthus uses more water than Zea mays (maize), mainly as a result of a longer growing season and higher productivity. Conversion of current land use for miscanthus production will likely disrupt regional hydrologic cycles, yet the magnitude, timing, and spatial distribution of effects are unknown. Here, we show the effects of five different scenarios of miscanthus production on the simulated Midwest US hydrologic cycle. Given the same historic precipitation observations, our ecosystem model simulation results show that on an annual basis miscanthus uses more water than the ecosystems it will likely replace. The actual timing and magnitude of increased water loss to the atmosphere depends on location; however, substantial increases only occur when miscanthus fraction cover exceeds 25% in dry regions and 50% in nearly all of the Midwest. Our results delineate where large‐scale land use conversion to perennial biofuel grasses might deplete soil water resources. Given the fact that some watersheds within the Midwest already have depleted water resources, we expect our results to inform decisions on where to grow perennial grasses for biofuel use to ensure sustainability of energy and water resources, and to minimize the potential for deleterious effects to water quantity and quality.


Gcb Bioenergy | 2010

A comparison of canopy evapotranspiration for maize and two perennial grasses identified as potential bioenergy crops.

Andy VanLoocke; Frank G. Dohleman; Carl J. Bernacchi

In the Midwestern US, perennial rhizomatous grasses (PRGs) are considered one of the most promising vegetation types to be used as a cellulosic feedstock for renewable energy production. The potential widespread use of biomass crops for renewable energy production has sparked numerous environmental concerns, including the impacts of land‐use change on the hydrologic cycle. We predicted that total seasonal evapotranspiration (ET) would be higher for PRGs relative to maize resulting from higher leaf area and a prolonged growing season. We further predicted that, compared with maize, higher aboveground biomass associated with PRGs would offset the higher ET and increase water‐use efficiency (WUE) in the context of biomass harvests for liquid biofuel production. To test these predictions, ET was estimated during the 2007 growing season for replicated plots of Miscanthus×giganteus (miscanthus), Panicum virgatum (switchgrass), and Zea mays (maize) using a residual energy balance approach. The combination of a 25% higher mean latent heat flux (λET) and a longer growing season resulted in miscanthus having ca. 55% higher cumulative ET over the growing season compared with maize. Cumulative ET for switchgrass was also higher than maize despite similar seasonal‐mean λET. Based on total harvested aboveground biomass, WUE was ca. 50% higher for maize relative to miscanthus; however, when WUE calculated from only maize grain biomass was compared with WUE calculated from miscanthus harvested aboveground biomass, this difference disappeared. Although WUE between maize and miscanthus differed postsenescence, there were no differences in incremental WUE throughout the growing season. Despite initial predictions, aboveground biomass for switchgrass was less than maize; thus WUE was substantially lower for switchgrass than for either maize scenario. These results indicate that changes in ET due to large‐scale implementation of PRGs in the Midwestern US would likely influence local and regional hydrologic cycles differently than traditional row crops.


Annual Review of Plant Biology | 2016

The Costs of Photorespiration to Food Production Now and in the Future

Berkley J. Walker; Andy VanLoocke; Carl J. Bernacchi; Donald R. Ort

Photorespiration is essential for C3 plants but operates at the massive expense of fixed carbon dioxide and energy. Photorespiration is initiated when the initial enzyme of photosynthesis, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), reacts with oxygen instead of carbon dioxide and produces a toxic compound that is then recycled by photorespiration. Photorespiration can be modeled at the canopy and regional scales to determine its cost under current and future atmospheres. A regional-scale model reveals that photorespiration currently decreases US soybean and wheat yields by 36% and 20%, respectively, and a 5% decrease in the losses due to photorespiration would be worth approximately


Plant Cell and Environment | 2013

Modelling C3 photosynthesis from the chloroplast to the ecosystem

Carl J. Bernacchi; Justin E. Bagley; Shawn P. Serbin; Ursula M. Ruiz-Vera; David M. Rosenthal; Andy VanLoocke

500 million annually in the United States. Furthermore, photorespiration will continue to impact yield under future climates despite increases in carbon dioxide, with models suggesting a 12-55% improvement in gross photosynthesis in the absence of photorespiration, even under climate change scenarios predicting the largest increases in atmospheric carbon dioxide concentration. Although photorespiration is tied to other important metabolic functions, the benefit of improving its efficiency appears to outweigh any potential secondary disadvantages.


Annual Review of Plant Biology | 2015

Terrestrial Ecosystems in a Changing Environment: A Dominant Role for Water

Carl J. Bernacchi; Andy VanLoocke

Globally, photosynthesis accounts for the largest flux of CO₂ from the atmosphere into ecosystems and is the driving process for terrestrial ecosystem function. The importance of accurate predictions of photosynthesis over a range of plant growth conditions led to the development of a C₃ photosynthesis model by Farquhar, von Caemmerer & Berry that has become increasingly important as society places greater pressures on vegetation. The photosynthesis model has played a major role in defining the path towards scientific understanding of photosynthetic carbon uptake and the role of photosynthesis on regulating the earths climate and biogeochemical systems. In this review, we summarize the photosynthesis model, including its continued development and applications. We also review the implications these developments have on quantifying photosynthesis at a wide range of spatial and temporal scales, and discuss the models role in determining photosynthetic responses to changes in environmental conditions. Finally, the review includes a discussion of the larger-scale modelling and remote-sensing applications that rely on the leaf photosynthesis model and are likely to open new scientific avenues to address the increasing challenges to plant productivity over the next century.


PLOS ONE | 2013

Miscanthus establishment and overwintering in the Midwest USA: a regional modeling study of crop residue management on critical minimum soil temperatures.

Christopher J. Kucharik; Andy VanLoocke; John D. Lenters; Melissa Motew

Transpiration--the movement of water from the soil, through plants, and into the atmosphere--is the dominant water flux from the earths terrestrial surface. The evolution of vascular plants, while increasing terrestrial primary productivity, led to higher transpiration rates and widespread alterations in the global climate system. Similarly, anthropogenic influences on transpiration rates are already influencing terrestrial hydrologic cycles, with an even greater potential for changes lying ahead. Intricate linkages among anthropogenic activities, terrestrial productivity, the hydrologic cycle, and global demand for ecosystem services will lead to increased pressures on ecosystem water demands. Here, we focus on identifying the key drivers of ecosystem water use as they relate to plant physiological function, the role of predicted global changes in ecosystem water uses, trade-offs between ecosystem water use and carbon uptake, and knowledge gaps.


New Phytologist | 2012

Rising ozone concentrations decrease soybean evapotranspiration and water use efficiency whilst increasing canopy temperature

Andy VanLoocke; Amy M. Betzelberger; Elizabeth A. Ainsworth; Carl J. Bernacchi

Miscanthus is an intriguing cellulosic bioenergy feedstock because its aboveground productivity is high for low amounts of agrochemical inputs, but soil temperatures below −3.5°C could threaten successful cultivation in temperate regions. We used a combination of observed soil temperatures and the Agro-IBIS model to investigate how strategic residue management could reduce the risk of rhizome threatening soil temperatures. This objective was addressed using a historical (1978–2007) reconstruction of extreme minimum 10 cm soil temperatures experienced across the Midwest US and model sensitivity studies that quantified the impact of crop residue on soil temperatures. At observation sites and for simulations that had bare soil, two critical soil temperature thresholds (50% rhizome winterkill at −3.5°C and −6.0°C for different Miscanthus genotypes) were reached at rhizome planting depth (10 cm) over large geographic areas. The coldest average annual extreme 10 cm soil temperatures were between −8°C to −11°C across North Dakota, South Dakota, and Minnesota. Large portions of the region experienced 10 cm soil temperatures below −3.5°C in 75% or greater for all years, and portions of North and South Dakota, Minnesota, and Wisconsin experienced soil temperatures below −6.0°C in 50–60% of all years. For simulated management options that established varied thicknesses (1–5 cm) of miscanthus straw following harvest, extreme minimum soil temperatures increased by 2.5°C to 6°C compared to bare soil, with the greatest warming associated with thicker residue layers. While the likelihood of 10 cm soil temperatures reaching −3.5°C was greatly reduced with 2–5 cm of surface residue, portions of the Dakotas, Nebraska, Minnesota, and Wisconsin still experienced temperatures colder than −3.5°C in 50–80% of all years. Nonetheless, strategic residue management could help increase the likelihood of overwintering of miscanthus rhizomes in the first few years after establishment, although low productivity and biomass availability during these early stages could hamper such efforts.


Gcb Bioenergy | 2016

Candidate perennial bioenergy grasses have a higher albedo than annual row crops

Jesse Miller; Andy VanLoocke; Nuria Gomez-Casanovas; Carl J. Bernacchi

• Here, we investigated the effects of increasing concentrations of ozone ([O(3)]) on soybean canopy-scale fluxes of heat and water vapor, as well as water use efficiency (WUE), at the Soybean Free Air Concentration Enrichment (SoyFACE) facility. • Micrometeorological measurements were made to determine the net radiation (R(n)), sensible heat flux (H), soil heat flux (G(0)) and latent heat flux (λET) of a commercial soybean (Glycine max) cultivar (Pioneer 93B15), exposed to a gradient of eight daytime average ozone concentrations ranging from approximately current (c. 40 ppb) to three times current (c. 120 ppb) levels. • As [O(3)] increased, soybean canopy fluxes of λET decreased and H increased, whereas R(n) and G(0) were not altered significantly. Exposure to increased [O(3)] also resulted in warmer canopies, especially during the day. The lower λET decreased season total evapotranspiration (ET) by c. 26%. The [O(3)]-induced relative decline in ET was half that of the relative decline in seed yield, driving a 50% reduction in seasonal WUE. • These results suggest that rising [O(3)] will alter the canopy energy fluxes that drive regional climate and hydrology, and have a negative impact on productivity and WUE, key ecosystem services.


Frontiers in Plant Science | 2017

Photosynthesis, Light Use Efficiency, and Yield of Reduced-Chlorophyll Soybean Mutants in Field Conditions

Rebecca A. Slattery; Andy VanLoocke; Carl J. Bernacchi; Xin-Guang Zhu; Donald R. Ort

The production of perennial cellulosic feedstocks for bioenergy presents the potential to diversify regional economies and the national energy supply, while also serving as climate ‘regulators’ due to a number of biogeochemical and biogeophysical differences relative to row crops. Numerous observational and model‐based approaches have investigated biogeochemical trade‐offs, such as increased carbon sequestration and increased water use, associated with growing cellulosic feedstocks. A less understood aspect is the biogeophysical changes associated with the difference in albedo (α), which could alter the local energy balance and cause local to regional cooling several times larger than that associated with offsetting carbon. Here, we established paired fields of Miscanthus × giganteus (miscanthus) and Panicum virgatum (switchgrass), two of the leading perennial cellulosic feedstock candidates, and traditional annual row crops in the highly productive ‘Corn‐belt’. Our results show that miscanthus did and switchgrass did not have an overall higher α than current row crops, but a strong seasonal pattern existed. Both perennials had consistently higher growing season α than row crops and winter α did not differ. The lack of observed differences in winter α, however, masked an interaction between snow cover and species differences, with the perennial species, compared with the row crops, having a higher α when snow was absent and a much lower α when snow was present. Overall, these changes resulted in an average net reduction in annual absorbed energy of about 5 W m−2 for switchgrass and about 8 W m−2 for miscanthus relative to annual crops. Therefore, the conversion from annual row to perennial crops alters the radiative balance of the surface via changes in α and could lead to regional cooling.


Journal of Experimental Botany | 2016

Expression of cyanobacterial FBP/SBPase in soybean prevents yield depression under future climate conditions

Iris H. Köhler; Ursula M. Ruiz-Vera; Andy VanLoocke; Michell L. Thomey; Tom E. Clemente; Stephen P. Long; Donald R. Ort; Carl J. Bernacchi

Reducing chlorophyll (chl) content may improve the conversion efficiency of absorbed photosynthetically active radiation into biomass and therefore yield in dense monoculture crops by improving light penetration and distribution within the canopy. The effects of reduced chl on leaf and canopy photosynthesis and photosynthetic efficiency were studied in two reportedly robust reduced-chl soybean mutants, Y11y11 and y9y9, in comparison to the wild-type (WT) “Clark” cultivar. Both mutants were characterized during the 2012 growing season whereas only the Y11y11 mutant was characterized during the 2013 growing season. Chl deficiency led to greater rates of leaf-level photosynthesis per absorbed photon early in the growing season when mutant chl content was ∼35% of the WT, but there was no effect on photosynthesis later in the season when mutant leaf chl approached 50% of the WT. Transient benefits of reduced chl at the leaf level did not translate to improvements in canopy-level processes. Reduced pigmentation in these mutants was linked to lower water use efficiency, which may have dampened any photosynthetic benefits of reduced chl, especially since both growing seasons experienced significant drought conditions. These results, while not confirming our hypothesis or an earlier published study in which the Y11y11 mutant significantly outyielded the WT, do demonstrate that soybean significantly overinvests in chl. Despite a >50% chl reduction, there was little negative impact on biomass accumulation or yield, and the small negative effects present were likely due to pleiotropic effects of the mutation. This outcome points to an opportunity to reinvest nitrogen and energy resources that would otherwise be used in pigment-proteins into increasing biochemical photosynthetic capacity, thereby improving canopy photosynthesis and biomass production.

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Justin E. Bagley

Lawrence Berkeley National Laboratory

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Shawn P. Serbin

Brookhaven National Laboratory

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Christopher J. Kucharik

University of Wisconsin-Madison

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Jason Hill

University of Minnesota

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