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Dive into the research topics where Anil Koklu is active.

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Featured researches published by Anil Koklu.


Biomicrofluidics | 2016

Platinum black electrodeposited thread based electrodes for dielectrophoretic assembly of microparticles

Renny Edwin Fernandez; Anil Koklu; Amin Mansoorifar; Ali Beskok

We report dielectrophoretic (DEP) assembly of biological cells and microparticles using platinum-black electrodeposited conductive textile fiber. The three-dimensional conductive structures with high aspect ratios were found to facilitate high electric field regions, as revealed by scanning electron microscope characterization. The effective conducting area (Aeff) and its stability of thread electrodes were estimated using electrochemical methods. Potential of platinum black electrodeposited thread as 3-D electrodes for creating high gradient electrical field for dielectrophoretic assembly of microspheres and Saccharomyces cerevisiae (yeast cells) into 1D and two-dimensional structures over long ranges under the application of low voltages (4-10 Vpp) has been demonstrated. The formation of highly ordered pearl chains of microparticles using thread electrodes when subjected to dielectrophoresis (DEP) has been discussed in detail.


IEEE Transactions on Nanobioscience | 2015

Flexible Bioimpedance Sensor for Label-Free Detection of Cell Viability and Biomass

Renny Edwin Fernandez; Elise Lebiga; Anil Koklu; Ahmet C. Sabuncu; Ali Beskok

We introduce a flexible microfluidic bioimpedance sensor that is capable of detecting biomass and cell viability variations in a cell suspension. The sensor is developed on indium tin oxide (ITO) coated polyethylene terephthalate (PET) substrate and is devoid of gold, silicon, PDMS, or glass. In conjugation with a custom built PCB read-out module, the impedance characteristics of a cell suspension can be measured within one minute of sample introduction using liquid volumes less than 5 μL. The portable sensor system occupies very little bench space and has the potential to be developed as a disposable electrical bioimpedance probe for rapid detection of dielectric variations in a biological suspension. The sensor is designed to generate a differential impedance spectra exclusive to a cell suspension with a dual-electrode-pair system. The potential of the sensor to discriminate between live and heat treated Saccharomyces cerevisiae is demonstrated in this study. The disposable sensor along with the distance variation technique is touted to be an inexpensive alternative to some of the existing online disposable biomass detection probes and electrochemical sensors.


Iet Nanobiotechnology | 2016

Electrothermal flow on electrodes arrays at physiological conductivities

Anil Koklu; Osman Tansel; Hakan Oksuzoglu; Ahmet C. Sabuncu

AC electrothermal (ET) flow is inevitable for microfluidic systems dissipating electric energy in a conducting medium. Therefore, many practical applications of biomicrofluidics are prone to ET flow. Here, a series of observations are reported on ET flow in a microfluidic chamber that houses three electrode pairs. The observations indicate that the variations in liquid conductivity and channel height critically impact the structure and magnitude of the flow field. Observations indicate that after a critical conductivity a global ET flow is present in the chamber, while at lower conductivities a vortex is present at every electrode edge. In addition, no ET flow is observed when the chamber height is kept below a critical value at physiological conductivity (∼1.5 S/m). The experimental observations are compared with the numerical simulations of ET flow. The validity of the assumptions made in the current AC ET flow theory is also discussed in the light of the experimental data. The observations can be critical while designing microfluidic systems that involve power dissipation in conductive fluids.


Electrophoresis | 2017

Dielectrophoresis assisted loading and unloading of microwells for impedance spectroscopy

Amin Mansoorifar; Anil Koklu; Ahmet C. Sabuncu; Ali Beskok

Dielectric spectroscopy (DS) is a noninvasive, label‐free, fast, and promising technique for measuring dielectric properties of biological cells in real time. We demonstrate a microchip that consists of electro‐activated microwell arrays for positive dielectrophoresis assisted cell capture, DS measurements, and negative dielectrophoresis driven cell unloading; thus, providing a high‐throughput cell analysis platform. To the best of our knowledge, this is the first microfluidic chip that combines electro‐activated microwells and DS to analyze biological cells. Device performance is tested using Saccharomyces cerevisiae (yeast) cells. DEP response of yeast cells is determined by measuring their Clausius–Mossotti factor using biophysical models in parallel plate microelectrode geometry. This information is used to determine the excitation frequency to load and unload wells. Effect of yeast cells on the measured impedance spectrum was examined both experimentally and numerically. Good match between the numerical and experimental results establishes the potential use of the microchip device for extracting subcellular properties of biological cells in a rapid and nonexpensive manner.


Electrophoresis | 2017

Enhancement of dielectrophoresis using fractal gold nanostructured electrodes

Anil Koklu; Ahmet C. Sabuncu; Ali Beskok

Dielectrophoretic motions of Saccharomyces cerevisiae (yeast) cells and colloidal gold are investigated using electrochemically modified electrodes exhibiting fractal topology. Electrodeposition of gold on electrodes generated repeated patterns with a fern‐leaf type self‐similarity. A particle tracking algorithm is used to extract dielectrophoretic particle velocities using fractal and planar electrodes in two different medium conductivities. The results show increased dielectrophoretic force when using fractal electrodes. Strong negative dielectrophoresis of yeast cells in high‐conductivity media (1.5 S/m) is observed using fractal electrodes, while no significant motion is present using planar electrodes. Electrical impedance at the electrode/electrolyte interface is measured using impedance spectroscopy technique. Stronger electrode polarization (EP) effects are reported for planar electrodes. Decreased EP in fractal electrodes is considered as a reason for enhanced dielectrophoretic response.


Analytical Chemistry | 2017

Self-Similar Interfacial Impedance of Electrodes in High Conductivity Media

Anil Koklu; Amin Mansoorifar; Ali Beskok

Electrode polarization (EP) happening due to accumulation of ions at the electrode/electrolyte interface is an inevitable phenomenon while measuring impedance spectrum in high conductivity buffers and at low RF spectrum. Well-characterized time scales elucidating the EP effect are important for the rational design of microfluidic devices and impedance sensors. In this Article, interfacial impedance at the electrode/electrolyte interface is investigated considering channel height and Debye length effects on characteristic time scale in a binary electrolyte solution using parallel plate electrode configuration. Experimental results reveal self-similarity of normalized electrical impedance as a function of the normalized frequency. The experimental results also match with numerical solutions obtained by finite element simulation of unsteady fully coupled Poisson-Nernst-Planck (PNP) equations. Furthermore, fractal shaped gold nanostructured electrodes are examined, and it has been proven that electric double layer (EDL) formed on porous electrode surfaces acts as a thick EDL and modifications to the characteristic time scale is necessary for porous electrodes. Finally, a constant phase element (CPE) model is proposed to account for the self-similar impedance spectrum, which can be used for different channel heights and solution conductivities.


Electrophoresis | 2018

Effects of electrode size and surface morphology on electrode polarization in physiological buffers

Anil Koklu; Amin Mansoorifar; Ali Beskok

Electrode polarization (EP) is inevitable in high conductivity buffers at low AC frequencies due to the accumulation of free charges at the electrode/electrolyte interface. Electrode miniaturization increases EP effect on impedance measurements. In this paper, six gold planar (GP) electrodes having different diameters ( 100μm≤ϕ≤4000μm ) were used to investigate the size effect on EP with parallel plate electrode geometry. GP electrode surface was electrochemically deposited with gold nanostructures (GNs) to minimize the EP effect. Equivalent circuit model was used to attain electrode/electrolyte interfacial impedance. Constant phase element model was used to analyze the relation between the size and morphology of electrodes on EP. The surface morphology of gold nanostructured electrodes was examined using SEM, and the influence of different applied potential on the growth of GNs was elucidated with Nernst equilibrium condition. Surface roughness and wettability characteristics were examined performing surface roughness and contact angle measurements, respectively. The improvement of GNs deposited electrode performance was investigated by analytically generated Jurkat cell suspension spectra. The results show that the error in estimating the subcellular properties can be drastically reduced by using GNs deposited electrodes.


Analytical Chemistry | 2018

Electrical Impedance Measurements of Biological Cells in Response to External Stimuli

Amin Mansoorifar; Anil Koklu; Shihong Ma; Ganesh V. Raj; Ali Beskok

Dielectric spectroscopy (DS) is a noninvasive technique for real-time measurements of the impedance spectra of biological cells. DS enables characterization of cellular dielectric properties such as membrane capacitance and cytoplasmic conductivity. We have developed a lab-on-a-chip device that uses an electro-activated microwells array for capturing, DS measurements, and unloading of biological cells. Impedance measurements were conducted at 0.2 V in the 10 kHz to 40 MHz range with 6 s time resolution. An equivalent circuit model was developed to extract the cell membrane capacitance and cell cytoplasmic conductivity from the impedance spectra. A human prostate cancer cell line, PC-3, was used to evaluate the device performance. Suspension of PC-3 cells in low conductivity buffers (LCB) enhanced their dielectrophoretic trapping and impedance response. We report the time course of the variations in dielectric properties of PC-3 cells suspended in LCB and their response to sudden pH change from a pH of 7.3 to a pH of 5.8. Importantly, we demonstrated that our device enabled real-time measurements of dielectric properties of live cancer cells and allowed the assessment of the cellular response to variations in buffer conductivity and pH. These data support further development of this device toward single cell measurements.


Electrochimica Acta | 2016

Rough Gold Electrodes for Decreasing Impedance at the Electrolyte/Electrode Interface

Anil Koklu; Ahmet C. Sabuncu; Ali Beskok


Microfluidics and Nanofluidics | 2017

Pressure-driven water flow through hydrophilic alumina nanomembranes

Anil Koklu; Jianing Li; Sevinç S. Sengör; Ali Beskok

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Ali Beskok

Southern Methodist University

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Ahmet C. Sabuncu

Southern Methodist University

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Amin Mansoorifar

Southern Methodist University

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Renny Edwin Fernandez

Southern Methodist University

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Elise Lebiga

Southern Methodist University

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Ganesh V. Raj

University of Texas Southwestern Medical Center

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Jianing Li

Southern Methodist University

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Sevinç S. Sengör

Southern Methodist University

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Shihong Ma

University of Texas Southwestern Medical Center

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Osman Tansel

Istanbul Technical University

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