Anna Rygula

Visualization of the biochemical markers of atherosclerotic plaque with the use of Raman, IR and AFM.

In this work, we describe a methodology to visualize the biochemical markers of atherosclerotic plaque in cross sections of brachiocephalic arteries (BCA) taken from ApoE/LDLR(-/-) mice. The approach of the visualization of the same area of atherosclerotic plaque with the use of Raman, IR and AFM imaging enables the parallel characterisation of various features of atherosclerotic plaques. This support to the histochemical staining is utilized mainly in studies on mice models of atherosclerotic plaques, where micro and sub-micro resolutions are required. This work presents the methodology of the measurement and visualization of plaque features important for atherosclerosis development and plaques vulnerability analysis. Label-free imaging of cholesterol, cholesteryl esters, remodeled media, heme, internal elastic lamina, fibrous cap and calcification provides additional knowledge to previously presented quantitative measurements of average plaque features. AFM imaging enhanced the results obtained with the use of vibrational microspectroscopies with additional topographical information of the sample. To the best of our knowledge, this is the first work which demonstrates that co-localized measurement of atherosclerotic plaque with Raman, IR and AFM imaging provides a comprehensive insight into the biochemical markers of atherosclerotic plaques, and can be used as an integrated approach to assess vulnerability of the plaque.

Endothelium in Spots – High-Content Imaging of Lipid Rafts Clusters in db/db Mice

Lipid rafts (LRs) are dynamic, sterol- and sphingolipid-enriched nanodomains involved in the regulation of cellular functions and signal transduction, that upon stimuli, via (e.g. association of raft proteins and lipids), may cluster into domains of submicron or micron scale. Up to date, however, lipid raft clusters were observed only under artificially promoted conditions and their formation in vivo has not been confirmed. Using non-destructive approach involving Raman and Atomic Force Microscopy imaging we demonstrated the presence of clustered lipid rafts in endothelium of the aorta of the db/db mice that represent a reliable murine model of type 2 diabetes. The raft clusters in the aorta of diabetic mice were shown to occupy a considerably larger (about 10-fold) area of endothelial cells surface as compared to the control. Observation of pathology-promoted LRs confirms that the cellular increase of lipid content results in clustering of LRs. Clustering of LRs leads to the formation of assemblies with diameters up to 3 micrometers and increased lipid character. This massive clustering of lipid rafts in diabetes may trigger a signaling cascade leading to vascular inflammation.

On two alizarin polymorphs

For centuries alizarin has been used as natural pigment, yet, now it is also used in histochemistry and dermatology, and as a dye for semiconductor solar cells. Here, the crystal structure of the previously known form of alizarin is determined accurately and its new polymorph is discovered. The two polymorphs crystallize into the same monoclinic crystal system. The previously known form is centrosymmetric (P21/c space group) whereas the new one is not (space group Pc). Both crystals are twinned, disordered, and have the molecules packed into the crystal lattices in a comparable way. However the powder patterns of both forms are visibly different. In addition the analysis of the fingerprints of H⋯O intermolecular interactions based on Hirshfeld surfaces also indicates differences in the packing. Yet, these similarities between two forms of alizarin make their vibrational spectra hardly distinguishable.

Vascular diseases investigated ex vivo by using Raman, FT-IR and complementary methods

This work shows the application of vibrational spectroscopy supported by other complementary techniques in analysis of tissues altered by vascular diseases, in particular atherosclerosis. The analysis of atherosclerotic plaque components, as well as label-free imaging of vessels and identification of biochemical markers of endothelial dysfunction are reported. Additionally, the potential of vibrational spectroscopy imaging in following the disease progression (including calcification) and pathological changes in heart valves is described. The presented research shows the effectiveness of techniques used in the biochemical studies of altered tissues and summarizes their capabilities in research on vascular diseases. The scope of the paper is to collect previously published work connected with the application of Raman spectroscopy, FT-IR spectroscopy and complementary methods for the investigation of vascular diseases ex vivo and presenting it in a comprehensive overview.

Live endothelial cells imaged by Scanning Near-field Optical Microscopy (SNOM): capabilities and challenges.

The scanning near-field optical microscopy (SNOM) shows a potential to study details of biological samples, since it provides the optical images of objects with nanometric spatial resolution (50-200 nm) and the topographic information at the same time. The goal of this work is to demonstrate the capabilities of SNOM in transmission configuration to study human endothelial cells and their morphological changes, sometimes very subtle, upon inflammation. Various sample preparations were tested for SNOM measurements and promising results are collected to show: 1) the influence of α tumor necrosis factor (TNF-α) on EA.hy 926 cells (measurements of the fixed cells); 2) high resolution images of various endothelial cell lines, i.e. EA.hy 926 and HLMVEC (investigations of the fixed cells in buffer environment); 3) imaging of live endothelial cells in physiological buffers. The study demonstrate complementarity of the SNOM measurements performed in air and in liquid environments, on fixed as well as on living cells. Furthermore, it is proved that the SNOM is a very useful method for analysis of cellular morphology and topography. Changes in the cell shape and nucleus size, which are the symptoms of inflammatory reaction, were noticed in TNF-α activated EA.hy 926 cells. The cellular structures of submicron size were observed in high resolution optical images of cells from EA.hy 926 and HLMVEC lines.

Multi-methodological insight into the vessel wall cross-section: Raman and AFM imaging combined with immunohistochemical staining

The vascular wall cross-section was submitted to multiparametric analysis with the application of several micro-scale methods: Raman and atomic force microscopy (AFM) imaging as well as immunohistochemical (IHC) staining. Both IHC staining as a standard reference method and Raman imaging allowed for visualization of tissue components such as elastin fibers or cell nuclei, moreover, Raman spectroscopy provided specific biochemical information about sample composition. Application of AFM complemented the chemical information with the data about the topography of the studied sample. Developing such a methodology allows for the multiparameter description of the vessel wall status that could be useful to monitor ex vivo the disease progression and effects of treatment in experimental diabetes, atherosclerosis or hypertension.

Raman, AFM and SNOM high resolution imaging of carotene crystals in a model carrot cell system

Three non-destructive and complementary techniques, Raman imaging, Atomic Force Microscopy and Scanning Near-field Optical Microscopy were used simultaneously to show for the first time chemical and structural differences of carotenoid crystals. Spectroscopic and microscopic scanning probe measurements were applied to the released crystals or to crystals accumulated in a unique, carotenoids rich callus tissue growing in vitro that is considered as a new model system for plant carotenoid research. Three distinct morphological crystal types of various carotenoid composition were identified, a needle-like, rhomboidal and helical. Raman imaging using 532 and 488 nm excitation lines provided evidence that the needle-like and rhomboidal crystals had similar carotenoid composition and that they were composed mainly of β-carotene accompanied by α-carotene. However, the presence of α-carotene was not identified in the helical crystals, which had the characteristic spatial structure. AFM measurements of crystals identified by Raman imaging revealed the crystal topography and showed the needle-like and rhomboidal crystals were planar but they differed in all three dimensions. Combining SNOM and Raman imaging enabled indication of carotenoid rich structures and visualised their distribution in the cell. The morphology of identified subcellular structures was characteristic for crystalline, membraneous and tubular chromoplasts that are plant organelles responsible for carotenoid accumulation in cells.

Chemometric Analysis of Raman and IR Spectra of Natural Dyes

The use of chemometric methods in the analysis of Raman and IR spectra of dyes has opened new possibilities in the areas previously reserved only for chromatographic methods or conventional UV-vis studies. This chapter is focused on the analysis of natural dyes, especially carotenoids, flavonoids, anthraquinones and indigoids presented in biological samples e.g. plants or food. The discussed chemometric methods are implemented both in the qualitative and quantitative determination of colorants with the techniques of vibrational spectroscopy