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Featured researches published by Bader Siddiki.


Biochemical and Biophysical Research Communications | 1990

Molecular cloning of cDNAs derived from a novel human intestinal mucin gene

James R. Gum; James W. Hicks; Dallas M. Swallow; Robert L. Lagace; James C. Byrd; Derek T. A. Lamport; Bader Siddiki; Young S. Kim

A human small intestinal lambda gt11 cDNA library was screened with antibodies to deglycosylated small intestinal mucin. Four partial cDNA clones were isolated that define a novel human mucin gene. These include two partial cDNA clones, SIB 124 and SIB 139, that contain 51 nucleotide tandem repeats which encode a seventeen amino acid repetitive peptide with a consensus sequence of HSTPSFTSSITTTETTS. SIB 139 hybridized to messages produced by small intestine, colon, colonic tumors and also by high mucin variant LS174T colon cancer cells. The gene from which cDNAs SIB 124 and SIB 139 are derived (proposed name MUC 3) maps to chromosome 7, distinct from other known human mucin genes.


Cancer | 1993

Immunohistochemical study of mucin carbohydrates and core proteins in human pancreatic tumors

Masahiko Osako; Suguru Yonezawa; Bader Siddiki; Jian Huang; Jenny J. L. Ho; Young S. Kim; Eiichi Sato

Background. Pancreatic cancer has a poor prognosis, and early diagnosis of carcinoma and discrimination between malignant and benign conditions are difficult. Many pancreatic cancer‐associated antigens, such as CA 19‐9, DU‐PAN‐2, YPan‐1, and SPan‐1, have been studied. However, expression of Tn, sialosyl‐Tn, and T antigens in tissues of different types of pancreatic neoplasms has not been investigated systematically. Moreover, little is known about the distribution of different types of apomucins in the pancreas.


Human Pathology | 1997

MUC2 gene expression is found in noninvasive tumors but not in invasive tumors of the pancreas and liver: Its close relationship with prognosis of the patients☆

Suguru Yonezawa; Kazunobu Sueyoshi; Mitsuharu Nomoto; Hiroshi Kitamura; Kohji Nagata; Yoshiko Arimura; Sadao Tanaka; Michael A. Hollingsworth; Bader Siddiki; Young S. Kim; Eiichi Sato

We have previously reported that MUC2 apomucin was highly expressed in noninvasive tumors of the pancreas (intraductal papillary tumor [IdPT]) and liver (bile duct cystadenocarcinoma [BdCC]), which show more favorable outcomes than invasive carcinomas. In contrast, MUC2 was rarely expressed in invasive carcinomas of the pancreas (invasive ductal carcinoma [IDC]) and the liver (invasive cholangiocarcinoma [ICC]). In the present study, we examined localization of MUC2 messenger RNA (MUC2 mRNA) by using a complementary DNA (cDNA) probe for the MUC2 tandem repeat for in situ hybridization (pHAM1). Localization of MUC2 apomucin was determined by using an antibody directed against MUC2 apomucin (anti-MRP) for immunohistochemistry study. Eleven IdPTs and 10 IDCs of the pancreas, and 8 BdCC and 8 ICCs of the liver were examined. Nine (82%) of 11 IdPTs showed positive expression of MUC2 mRNA in the neoplastic cells, whereas none (0%) of the IDCs showed expression of MUC2 mRNA. Six (75%) of the 8 BdCCs showed positive expression of MUC2 mRNA in the neoplastic cells, whereas none (0%) of the 8 ICCs showed expression of MUC2 mRNA. The localization of MUC2 mRNA and that of MUC2 apomucin usually coincided, although a few cases (1 IDC, 1 BdCC, and 1 ICC) showed focal expression of MUC2 apomucin despite the absence of detectable MUC2 mRNA. These results indicate that the expression of MUC2 apomucin in IdPTs and BdCCs correlates with expression of MUC2 mRNA. In both patient groups with pancreatic tumors and hepatic tumors, patients with positive MUC2 mRNA expression in the tumors showed significantly better survival than those with negative MUC2 mRNA expression in the tumors. The production of MUC2, an abundant extracellular mucin, by most IdPTs and BdCCs may be correlated with tumors that display lower levels of invasion and metastasis.


European Journal of Cancer | 1997

Mucins secreted by cell lines derived from colorectal mucinous carcinoma and adenocarcinoma

M. Cho; Rajvir Dahiya; S.R. Choi; Bader Siddiki; M.M. Yeh; Marvin H. Sleisenger; Y.S. Kirn

Mucinous (colloid) carcinoma and well- to moderately-differentiated adenocarcinoma of the colon differ in the pattern and the amount of mucin secretion and perhaps in their behaviour and clinical outcome. To ascertain why these differences exist and to elucidate the mechanisms of tumour progression, we examined two model human cell lines derived from colorectal mucinous carcinoma (C1a) and moderately differentiated adenocarcinoma (HM3) which show typical pathological and mucin staining patterns of the respective type of carcinomas to nude mouse tumour xenografts. Specifically, we sought to determine if there were quantitative and qualitative differences in mucin synthesis, in mucin gene expression and in biological properties between the two model cell lines. Northern blot analysis showed that MUC2 mRNA levels were significantly higher in C1a cells compared with HM3 cells, while those of MUC3, -5 and -6 mRNA were lower. C1a cells secreted approximately five times more radiolabelled apomucin and 1.5 times more glycosylated apomucin than HM3 cells. When the carbohydrate side-chain length of secreted mucins by these cell lines were examined by beta-elimination followed by P4 column chromatography, C1a mucins had mostly short carbohydrate side-chains, while HM3 cells had predominantly longer side-chains. Western blot analysis of the cell homogenate showed higher expression of MUC2 apomucin and mucin-associated carbohydrate antigens, such as T, Tn and sialyl Tn, with decreased sialyl Le(x) expression in C1a cells compared with HM3. Immunohistochemical analysis of 35 colorectal adenocarcinoma and 25 mucinous colorectal carcinoma tissues also demonstrated increased MUC2 apomucin, T, Tn and sialyl Tn antigens in the mucinous cancer specimens. Examination of the biological properties of these cell lines showed that C1a cells had significantly higher in vitro invasive activity in assays of invasion and collagenase activity and significantly lower E-selectin binding and liver colonisation activities in nude mice. These results indicate that colorectal mucinous carcinoma cells differ considerably from colorectal adenocarcinoma cells, both qualitatively and quantitatively, in the pattern of mucin gene expression and in the synthesis and secretion of mucin. In addition, biological studies showed that mucinous carcinoma cells have a greater degree of invasiveness, but less liver colonising activity. These results suggest that the biological and mucin characteristics of mucinous carcinoma cells contribute to extensive local invasion through tissue stroma as the predominant mechanism of tumour progression, while the biological and mucin characteristics of well- to moderately-differentiated colorectal adenocarcinoma contribute to progression via distant metastasis formation.


European Journal of Cancer | 1996

Alteration in mucin gene expression and biological properties of HT29 colon cancer cell subpopulations

H. Kitamura; M. Cho; B.H. Lee; J.R. Gum; Bader Siddiki; S.B. Ho; N.W. Toribara; T. Lesuffleur; A. Zweibaum; Y. Kitamura; S. Yonezawa; Young S. Kim

Previous studies from our laboratory have shown that HT29 cells selected by adaptation to methotrexate (HT29-MTX) express mature mucins that differ in their immunoreactivity to antibodies against gastric mucin and in the level of one of two major gastric mucin MUC5AC (MUC5) mRNA compared with parental HT29 cells. In this study, we examined the expression of another major gastric mucin, MUC6 mRNA, as well as that of MUC2, -3 and -5 mRNAs in HT29-MTX cells. We also examined their relationship to mucin-related antigen expression and biological properties of the cells such as adhesion to matrigel and E-selectin and in vitro invasiveness, liver colonising activity and degree of differentiation of nude mouse xenograft. Slot blot and Northern analysis revealed markedly increased levels of MUC5 mRNA but no change in MUC6 mRNA level in HT29-MTX cells compared with parental HT29 cells which express barely detectable levels of MUC6 mRNA. A nuclear run-on study showed that MUC5 mRNA was up-regulated at the transcriptional level. The marked increase in MUC5 mRNA was associated with a significant increase in the expression of human gastric mucin and apomucin antigens in HT29-MTX cells. When the adhesive capacity of two cell lines was compared, HT29-MTX cells showed significantly lower adhesion to E-selectin consistent with their lower expression of sialyl Le(x) and sialyl Le(a) antigens compared with HT29 cells. HT29-MTX cells also showed lower adhesive capacity to matrigel than HT29 cells. Interestingly, HT29-MTX cells exhibited significantly decreased liver colonisation capacity in nude mice following splenic vein injection. Furthermore, nude mouse xenograft tumours produced by HT29-MTX cells exhibited a significantly greater degree of differentiation, consisting of mucin-secreting glands than those produced by HT29 cells. In conclusion, these results indicate a shift of predominantly colonic-type mucins to the gastric type, specifically the surface epithelial cell type (MUC5) but not the mucous neck cell or antral gland type (MUC6) in HT29-MTX cells and strongly suggest that altered regulation of mucin genes and the degree of differentiation in cancer cells may be responsible for the altered biological behaviour of these cells.


International Journal of Cancer | 1997

Expression of mucin-associated tumor antigens is altered by cell density

Yoshito Yamashita; Jenny J. L. Ho; Sandra Cheng; Bader Siddiki; Yong-Suk Chung; Michio Sowa; Young S. Kim

Mucin‐associated sialylated Lewis antigens are implicated in tumor cell metastasis and are used in several tests for pancreatic cancer. Despite their clinical importance, little is known about the structures of the oligosaccharides of pancreatic cancer mucins or about the regulation of their synthesis or of the synthesis of their protein cores. In this study, we examined the effects of culture at high cell density on the expression of these antigens in the SW1990 human pancreatic cancer cell line. Mucins from cells that were 2.5 weeks post‐confluent had increased expression of sialyl‐Lewisa and Lewisx antigens but reduced expression of the DU‐PAN‐2 antigen (NeuAcα2,3Galβ1,3GlcNAc‐Gal‐R) when compared to mucins from 1 day post‐confluent cells. Sialyl‐Lewis antigens differ from the DU‐PAN‐2 antigen by the presence of an additional fucose. Mucins from 2.5‐week cells also had increased binding to lectins specific for fucose, such as AAL and UEA1, with no apparent change in the binding of lectins specific for sialic acids. Metabolically radiolabeled O‐linked oligosaccharides with sialyl‐Lewisa antigenic reactivity eluted from Bio‐Gel P‐10 in the region of sialylated and sulfated oligosaccharides. Oligosaccharides eluted from QAE‐Sephadex (2 mM Tris base) in a pattern suggesting the presence of 1, 2 and 3 or more negative charges per oligosaccharide. Even after desialylation and desulfation, oligosaccharides eluted from Bio‐Gel P‐10 with apparent molecular sizes greater than glucose oligomers of 12 units. Culture of SW1990 cells at high density also increased the steady‐state levels of mRNA for mucins MUC1, 2, 4, 5 and 6. In summary, after prolonged culture at high cell density, SW1990 cells have qualitative changes in their oligosaccharides that may be due to up‐regulation of fucosyltransferases. Int. J. Cancer 72:457–466, 1997.


Journal of Biological Chemistry | 1994

Molecular cloning of human intestinal mucin (MUC2) cDNA : identification of the amino terminus and overall sequence similarity to prepro-Von Willebrand factor

James R. Gum; James W. Hicks; Neil W. Toribara; Bader Siddiki; Young Seok Kim


Journal of Biological Chemistry | 1993

Human gastric mucin. Identification of a unique species by expression cloning.

Neil W. Toribara; Anthony M. Roberton; Samuel B. Ho; Wen Lin Kuo; Elizabeth Gum; James W. Hicks; James R. Gum; James C. Byrd; Bader Siddiki; Young S. Kim


Glycobiology | 1994

Alterations of O-glycan biosynthesis in human colon cancer tissues.

Ji Mao Yang; James C. Byrd; Bader Siddiki; Yong Suk Chung; Masahiro Okuno; Michio Sowa; Young S. Kim; Khushi L. Matta; Inka Brockhausen


Cancer Research | 1995

Association of Sialyl-Lewisa and Sialyl-Lewisx with MUC-1 Apomucin in a Pancreatic Cancer Cell Line

Jenny J. L. Ho; Bader Siddiki; Young S. Kim

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Young S. Kim

University of California

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James C. Byrd

University of Nebraska Medical Center

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James R. Gum

University of California

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James W. Hicks

University of California

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Jenny J. L. Ho

University of California

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Jian Huang

University of California

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