Barbara George-Jaeggli

Drought adaptation of stay-green sorghum is associated with canopy development, leaf anatomy, root growth, and water uptake

Summary The positive effects of stay-green quantitative trait loci on grain yield of sorghum under post-anthesis drought are emergent consequences of their effects on water-use patterns, resulting from changes in pre-anthesis canopy size.

Stay-green alleles individually enhance grain yield in sorghum under drought by modifying canopy development and water uptake patterns

Stay-green is an integrated drought adaptation trait characterized by a distinct green leaf phenotype during grain filling under terminal drought. We used sorghum (Sorghum bicolor), a repository of drought adaptation mechanisms, to elucidate the physiological and genetic mechanisms underpinning stay-green. Near-isogenic sorghum lines (cv RTx7000) were characterized in a series of field and managed-environment trials (seven experiments and 14 environments) to determine the influence of four individual stay-green (Stg1-4) quantitative trait loci (QTLs) on canopy development, water use and grain yield under post-anthesis drought. The Stg QTL decreased tillering and the size of upper leaves, which reduced canopy size at anthesis. This reduction in transpirational leaf area conserved soil water before anthesis for use during grain filling. Increased water uptake during grain filling of Stg near-isogenic lines (NILs) relative to RTx7000 resulted in higher post-anthesis biomass production, grain number and yield. Importantly, there was no consistent yield penalty associated with the Stg QTL in the irrigated control. These results establish a link between the role of the Stg QTL in modifying canopy development and the subsequent impact on crop water use patterns and grain yield under terminal drought.

Multi-Spectral Imaging from an Unmanned Aerial Vehicle Enables the Assessment of Seasonal Leaf Area Dynamics of Sorghum Breeding Lines

Genetic improvement in sorghum breeding programs requires the assessment of adaptation traits in small-plot breeding trials across multiple environments. Many of these phenotypic assessments are made by manual measurement or visual scoring, both of which are time consuming and expensive. This limits trial size and the potential for genetic gain. In addition, these methods are typically restricted to point estimates of particular traits, such as leaf senescence or flowering and do not capture the dynamic nature of crop growth. In water-limited environments in particular, information on leaf area development over time would provide valuable insight into water use and adaptation to water scarcity during specific phenological stages of crop development. Current methods to estimate plant leaf area index (LAI) involve destructive sampling and are not practical in breeding. Unmanned aerial vehicles (UAV) and proximal-sensing technologies open new opportunities to assess these traits multiple times in large small-plot trials. We analyzed vegetation-specific crop indices obtained from a narrowband multi-spectral camera on board a UAV platform flown over a small pilot trial with 30 plots (10 genotypes randomized within 3 blocks). Due to variable emergence we were able to assess the utility of these vegetation indices to estimate canopy cover and LAI over a large range of plant densities. We found good correlations between the Normalized Difference Vegetation Index (NDVI) and the Enhanced Vegetation Index (EVI) with plant number per plot, canopy cover and LAI both during the vegetative growth phase (pre-anthesis) and at maximum canopy cover shortly after anthesis. We also analyzed the utility of time-sequence data to assess the senescence pattern of sorghum genotypes known as fast (senescent) or slow senescing (stay-green) types. The Normalized Difference Red Edge (NDRE) index which estimates leaf chlorophyll content was most useful in characterizing the leaf area dynamics/senescence patterns of contrasting genotypes. These methods to monitor dynamics of green and senesced leaf area are suitable for out-scaling to enhance phenotyping of additional crop canopy characteristics and likely crop yield responses among genotypes across large fields and multiple dates.

Novel Grain Weight Loci Revealed in a Cross between Cultivated and Wild Sorghum

Quantitative trait loci for thousand grain weight were mapped in a cross between domesticated and wild sorghum. The majority of thousand grain weight quantitative trait loci were negatively associated with grain number. Novel large‐effect thousand grain weight quantitative trait loci possibly related to sorghum domestication were identified. Candidate genes with domestication signal were identified within the large‐effect quantitative trait loci.

Effect of Soil Moisture Regimes on Growth and Seed Production of Two Australian Biotypes of Sisymbrium thellungii O. E. Schulz

Sisymbrium thellungii O. E. Schulz is an emerging problematic weed in the northern grain region of Australia. Several different biotypes exist in this region but not all biotypes exhibit the same growth and reproduction behavior. This might be due to local adaptation to the different agro-ecosystems, however, information on this aspect is limited. To determine whether adaptation to water stress was a factor in biotype demographic growth and reproduction behavior, we evaluated the physiological and biochemical responses of two Australian S. thellungii biotypes, selected from high (Dalby) and medium (St. George) rainfall areas, to different pot soil moisture levels corresponding to 100, 75, 50, and 25% of soil water holding capacity (WHC). Averaged across moisture levels, the St. George biotype (medium rainfall area) had 89% greater biomass and produced 321% more seeds than the Dalby biotype. The St. George biotype was less affected by increased levels of water stress than the Dalby biotype. The Dalby biotype produced 4,787 seeds plant-1 at 100% WHC and only 28 seeds plant-1 at 25% WHC. On the other hand, the St. George biotype produced 4,061 seeds plant-1 at 25% WHC and its seed production at 100% WHC was 9,834 seeds plant-1. On a per leaf area basis and averaged across all moisture levels, the St. George had significantly lower net carbon assimilation compared with the Dalby biotype, accompanied by a trend for lower stomatal conductance, which might indicate an adaptation to water stress. Across the moisture levels, the St. George biotype had higher phenolics and total soluble sugar, but free proline content was higher in the Dalby biotype compared with the St. George biotype. Like total soluble sugar, proline content increased with water stress in both biotypes, but it increased to a greater extent in the Dalby biotype, particularly at the 25% of WHC. Branching, flowering and maturity occurred earlier in the St. George biotype compared with the Dalby biotype, indicating relatively faster growth of the St. George biotype, which again seems to be an adaptation to water-limited environments. In conclusion, the St. George biotype of S. thellungii had higher reproductive capacity than the Dalby biotype across all the moisture regimes, which suggests greater invasiveness. Overall, the large size and rapid growth of the S. thellungii population from the medium rainfall area, together with its physiological response to water stress and its ability to maintain seed production in dry conditions, may enable this biotype to become widespread in Australia.