Ben Macdonald

Climate change, conservation and management: an assessment of the peer-reviewed scientific journal literature

Recent reviews of the conservation literature indicate that significant biases exist in the published literature regarding the regions, ecosystems and species that have been examined by researchers. Despite the global threat of climatic change, similar biases may be occurring within the sub-discipline of climate-change ecology. Here we hope to foster critical thought and discussion by considering the directions taken by conservation researchers when addressing climate change. To form a quantitative basis for our perspective, we assessed 248 papers from the climate change literature that considered the conservation management of biodiversity and ecosystems. We found that roughly half of the studies considered climate change in isolation from other threatening processes. We also found that the majority of surveyed scientific publications were conducted in the temperate forests of Europe and North America. Regions such as Latin America that are rich in biodiversity but may have low adaptive capacity to climate change were not well represented. We caution that such biases in research effort may be distracting our attention away from vulnerable regions, ecosystems and species. Specifically we suggest that the under-representation of research from regions low in adaptive capacity and rich in biodiversity requires international collaboration by those experienced in climate-change research, with researchers from less wealthy nations who are familiar with local issues, ecosystems and species. Furthermore, we caution that the propensity of ecologists to work in essentially unmodified ecosystems may fundamentally hamper our ability to make useful recommendations in a world that is experiencing significant global change.

Species traits predict assemblage dynamics at ephemeral resource patches created by carrion.

Carrion is an ephemeral and spatially patchy resource that supports a diverse subset of species linked to nutrient cycling and the decomposition process. A number of studies have separately documented changes in the diversity of plants, arthropods and vertebrates at individual carcasses, but there are few studies that have examined how functional traits of different groups of organisms underpin their responses to carrion patches. We used a carrion addition experiment to compare changes in composition and functional traits of insect and plant assemblages at carcasses compared with control sites. We found that significant changes in insect assemblage evenness and heterogeneity was associated with species’ dispersal traits, and that plant assemblage responses to subsequent soil nitrogen changes was most apparent among graminoids and exotic species. Beetles at carcasses were twice as large as their counterparts at control sites during the first week of carrion decomposition, and also had higher wing loadings. Plants with high specific leaf area responded faster to the carcass addition, and twice as many species recolonised the centre of carcasses in exotic-dominated grassland compared with carcasses in native-dominated grassland. These results provide an example of how traits of opportunist species enable them to exploit patchy and dynamic resources. This increases our understanding of how carcasses can drive biodiversity dynamics, and has implications for the way carrion might be managed in ecosystems, such as appropriate consideration of spatial and temporal continuity in carrion resources to promote heterogeneity in nutrient cycling and species diversity within landscapes.

Characteristics of the Acidity in Acid Sulfate Soil Drainage Waters, McLeods Creek, Northeastern NSW, Australia

Environmental Context. Acid sulfate soils are found in many low-lying coastal areas, but they can also be encountered in inland areas of Australia and other parts of the world. These soils typically contain iron sulfides, primarily pyrite (FeS2) and mackinawite (FeS), and the products that result from oxidation of these iron minerals. Acidic and metal-rich waters can be produced when the pyrite in soil is oxidized by natural means or accelerated when the soil is drained, which typically occurs when it is developed for agriculture or urban use. In general, acid sulfate soils become a problem when oxidation products are transported from the soil profile into nearby streams and estuaries, which can severely affect the ecology, biodiversity, economic development, and the aesthetics of adjacent waterways. The key contributors to acidity in drainage waters from the site examined are Al3+, AlSO4– and, under particular circumstances, Mn2+ and Fe2+, but the principal species contributing to acidity are strongly time variant and would be expected to vary from site to site. Abstract. Catchments that contain acid sulfate soils can discharge large quantities of acid and dissolved metals into waterways. At McLeods Creek in far northern NSW, Australia, the acidity from the hydrolysis of dissolved metal species, particularly aluminium and iron, contributes to greater than 70% of the total acidity. Therefore, a poor relationship exists between both calculated and titrated acidity and pH because of the dominant influence of these hydrolyzable metal species. Determination of the so-called ‘cold acidity’ by direct titration with NaOH yields results that are difficult to replicate because of the buffering effects of suspended solids, carbon dioxide ingassing, and/or MnII and FeII oxidation in the sample as the titration end-point is approached. Samples that are pre-treated with sulfuric acid and hydrogen peroxide produce results (of ‘hot acidity’) that can be easily replicated and are similar to calculated acidities based on elemental analysis and speciation calculations. The cold acidity values for titrations of 105 water samples from the chosen field site are often higher than hot acidity values as a result of the loss of carbonate acidity during pre-treatment of samples for hot acidity analysis.

Tracking Short-Term Effects of Nitrogen-15 Addition on Nitrous Oxide Fluxes Using Fourier-Transform Infrared Spectroscopy

Synthetic fertilizer N additions to soils have significantly increased atmospheric NO concentrations, and advanced methods are needed to track the amount of applied N that is transformed to NO in the field. We have developed a method for continuous measurement of NO isotopologues (NNO, NNO, NNO, and NNO) following 0.4 and 0.8 g N m of N-labeled substrate as KNO or urea [CO(NH)] using Fourier-transform infrared (FTIR) spectroscopy. We evaluated this method using two 4-wk experimental trials on a coastal floodplain site near Nowra, New South Wales, Australia, which is managed for silage production. We deployed an automated five-chamber system connected to a portable FTIR spectrometer with multipass cell to measure NO isotopologue fluxes. Emissions of all isotopologues were evident immediately following N addition. All isotopologues responded positively to rainfall events, but only for 7 to 10 d following N addition. Cumulative N-NO fluxes (sum of the three N isotopologues) per chamber for the 14 d following N addition ranged from 1.5 to 10.3 mg N m. Approximately 1% (range 0.7-1.9%) of the total amount of N applied was emitted as NO. Repeatability (1σ) for all isotopologue measurements was better than 0.5 nmol mol for 1-min average concentration measurements, and minimum detectable fluxes for each isotopologue were <0.1 ng N m s. The results indicate that the portable FTIR spectroscopic technique can effectively trace transfer of N to the atmosphere as NO after N addition, allowing powerful quantification of NO emissions under field conditions.

Constraining the annual groundwater contribution to the water balance of an agricultural floodplain using radon: the importance of floods

The water balance of drained floodplains is highly dynamic with complex groundwater-surface water interactions operating over varying spatial and temporal scales. Here we hypothesize that the majority of groundwater discharge will follow flood events in a modified wetland. To test this hypothesis, we developed a detailed water balance that quantifies the contribution of groundwater discharge to the annual water budget of an extensively drained agricultural floodplain. A clear relationship between surface water radon measurements and groundwater level indicated alternating connection-disconnection dynamics between the drains and shallow groundwater. This relationship was used to develop a radon mass balance to quantitatively model groundwater discharge continuously throughout the year. Groundwater discharge varied by four orders of magnitude over the study period, with daily average rates ranging from 0 to 27,200 m(3) d(-1), peaking just a few hours after floods receded. Flood events occurred only 12% of the time yet contributed 72-76% of the total groundwater discharge. During flood recession periods, aerial groundwater discharge rates reached up to 325 cm d(-1) which were some of the highest rates ever estimated. We proposed that the high drainage density of this site (12.4 km constructed drains km(-2) catchment area) enhanced groundwater discharge during wet periods due to increased connectivity with the soil. Overall, groundwater discharge contributed 30-80% to the total surface water discharge. This study offers insight into the dynamic behavior of groundwater within an extensively drained floodplain, and the importance of capturing flood events to quantify total groundwater contribution to floodplain water balances.

Available carbon and nitrate increase greenhouse gas emissions from soils affected by salinity

Sea-level rise and saline water intrusion have caused a shortage of fresh water and affected agricultural areas globally. Besides inundation, the salinity could alter soil nitrogen and carbon cycling in coastal soils. To examine the effect of salinity, an incubation experiment was used to investigate soil nitrogen and carbon cycling from an acid sulfate soil and an alluvial soil with and without additional nitrogen and carbon sources. Four levels of saline solution of 0.03, 10, 16 and 21dSm–1 were used to submerge acid sulfate and alluvial soil samples in a 125-mL jar. The experimental jars were incubated in the dark at 25°C. Gas samples were collected over 4 weeks and analysed for nitrous oxide (N2O), carbon dioxide (CO2) and methane (CH4). The results showed that salinity significantly decreased N2O emissions from the acid sulfate soil but did not affect emissions from the alluvial soil. Addition of glucose and nitrate enhanced N2O production in both salt-affected soils. Emissions of CO2 were not different among the salinity treatments, whereas available carbon and nitrate promoted soil respiration. Changes in CH4 fluxes over the 4-week incubation were the same for both soils, and substrate addition did not affect emissions in either soil. The findings indicate that salinity has altered carbon and nitrogen cycles in the acid sulfate soil, and future fertiliser and crop management will need to account for the changed nutrient cycling caused by saline water intrusion and climate change.

Emission factors for estimating fertiliser-induced nitrous oxide emissions from clay soils in Australia’s irrigated cotton industry

As a significant user of nitrogen (N) fertilisers, the Australian cotton industry is a major source of soil-derived nitrous oxide (N2O) emissions. A country-specific (Tier 2) fertiliser-induced emission factor (EF) can be used in national greenhouse gas inventories or in the development of N2O emissions offset methodologies provided the EFs are evidence based. A meta-analysis was performed using eight individual N2O emission studies from Australian cotton studies to estimate EFs. Annual N2O emissions from cotton grown on Vertosols ranged from 0.59kgNha–1 in a 0N control to 1.94kgNha–1 in a treatment receiving 270kgNha–1. Seasonal N2O estimates ranged from 0.51kgNha–1 in a 0N control to 10.64kgNha–1 in response to the addition of 320kgNha–1. A two-component (linear+exponential) statistical model, namely EF (%)=0.29+0.007(e0.037N – 1)/N, capped at 300kgNha–1 describes the N2O emissions from lower N rates better than an exponential model and aligns with an EF of 0.55% using a traditional linear regression model.

Conversion of nitrous oxide to nitrogen by cobalt-substituted myoglobin

Developing technology to decrease greenhouse gas emissions is one of the greatest challenges we face in the 21st century. Nitrous oxide (N2O) is an important greenhouse gas, which is estimated to contribute 6% of the overall global warming effect. Herein we report the use of cobalt substituted heme proteins to reduce N2O to nitrogen (N2). This catalysis was electrochemically driven using methyl viologen or benzyl viologen as electron transfer partners for cobalt myoglobin. Using bulk electrolysis we demonstrated the production of 15N2 from 15N2. This catalysis, however, was noted to be poor, most likely due to oxidative damage to the protein scaffold.

Methane emission from rice cultivation in different agro-ecological zones of the Mekong river delta: seasonal patterns and emission factors for baseline water management

ABSTRACT This study comprises a set of methane emission measurements in rice fields located in the four agro-ecological zones of the Mekong River Delta (MRD), namely the zones with (i) alluvial soils, (ii) salinity intrusion, (iii) deep flood, and (iv) acid sulfate soils. These zones have very distinct bio-physical conditions and cropping cycles that will affect methane emissions in various forms. Our study includes comprehensive mapping of these zones as well as an overview of rice statistics (activity data) at provincial level for each cropping season. Emission data were obtained by the closed chamber method. The available data set comprises 7 sites with 15 cropping seasons. Mean emission rates showed large variations ranging from 0.31 to 9.14 kg CH4 ha−1 d−1. Statistical analysis resulted in weighted means for all zones that we use as zone-specific CH4 emission factors (EFz) in the context of the IPCC Tier 2 approach. The lowest EFz was computed for the saline accounting for 1.14 kg CH4 ha−1 d−1 (confidence interval: 0.60–2.14). The EFz values of the alluvial and acid sulfate zones were 2.39 kg CH4 ha−1 d−1 (2.19–4.13) and 2.78 kg CH4 ha−1 d−1 (2.65–3.76), respectively, which indicated that they were not different from each other derived from their confidence intervals. The deep flood zone, however, required a season-specific, assessment of EFz because emission in the autumn–winter cropping season, corresponding to the wet period, was significantly higher (9.14 kg CH4 ha−1 d−1 (7.08–11.2)) than the other seasons (2.24 kg CH4 ha−1 d−1 (1.59–3.47)). Although these emission factors correspond to baseline water management and do not capture the diversity of farmers’ practices, we see the availability of zone-specific data as an important step for a more detailed assessment of Business as Usual emissions as well as possible mitigation potentials in one of the most important rice growing regions of the world.

Fluxes of greenhouse gases from incubated soils using different lid-closure times

Different sampling times for greenhouse gas measurements have been proposed in many incubation studies. Little is known about effects of closure time on denitrification and nitrification rates from incubation experiments. The objectives of this study were to analyse greenhouse gas (carbon dioxide, methane and nitrous oxide) production from different soils with different times of lid closure and to assess effects of different activation times (defined as additional pre-incubation periods before incubation experiments) on gas emissions from soils. Forty grams of air-dried soil samples (depth 0–10 cm) were incubated in 125-mL jars at 25°C with the addition of glucose and nitrate. The first experiment measured greenhouse gas fluxes at different lid-closure times (40, 80, 120 and 1440 min). The second experiment assessed the effects of different durations of soil activation (0.7, 1.3, 2 and 24 h) on gas emissions. Both were conducted with a completely randomised design, with three replicates per treatment. Our findings showed closure time 2 h may cause an underestimate of greenhouse gas emissions. Lengthening activation times resulted in different emission rates consistent with soil characteristics. To measure gas fluxes based on linear regression would require four or five sampling points and sampling at a 20-min interval over a maximum period of 80 min for estimating gas fluxes from soil. Because pre-incubation time is critical and a driving factor in the measurement of soil-induced gas emissions, a standardised procedure to quantify gas fluxes is needed for application to other soils.