Betsy M. Karle

Transport of Cryptosporidium parvum Oocysts through Vegetated Buffer Strips and Estimated Filtration Efficiency

ABSTRACT Vegetated buffer strips were evaluated for their ability to remove waterborne Cryptosporidium parvum from surface and shallow subsurface flow during simulated rainfall rates of 15 or 40 mm/h for 4 h. Log10 reductions for spiked C. parvum oocysts ranged from 1.0 to 3.1 per m of vegetated buffer, with buffers set at 5 to 20% slope, 85 to 99% fescue cover, soil textures of either silty clay (19:47:34 sand-silt-clay), loam (45:37:18), or sandy loam (70:25:5), and bulk densities of between 0.6 to 1.7 g/cm3. Vegetated buffers constructed with sandy loam or higher soil bulk densities were less effective at removing waterborne C. parvum (1- to 2-log10 reduction/m) compared to buffers constructed with silty clay or loam or at lower bulk densities (2- to 3-log10 reduction/m). The effect of slope on filtration efficiency was conditional on soil texture and soil bulk density. Based on these results, a vegetated buffer strip comprised of similar soils at a slope of ≤20% and a length of ≥3 m should function to remove ≥99.9% of C. parvum oocysts from agricultural runoff generated during events involving mild to moderate precipitation.

Developing risk models of Cryptosporidium transport in soils from vegetated, tilted soilbox experiments.

Transport of Cryptosporidium parvum through macroporous soils is poorly understood yet critical for assessing the risk of groundwater contamination. We developed a conceptual model of the physics of flow and transport in packed, tilted, and vegetated soilboxes during and immediately after a simulated rainfall event and applied it to 54 experiments implemented with different soils, slopes, and rainfall rates. Using a parsimonious inverse modeling procedure, we show that a significant amount of subsurface outflow from the soilboxes is due to macropore flow. The effective hydraulic properties of the macropore space were obtained by calibration of a simple two-domain flow and transport model that accounts for coupled flow in the matrix and in the macropores of the soils. Using linear mixed-effects analysis, macropore hydraulic properties and oocyst attenuation were shown to be associated with soil bulk density and rainfall rate. Macropore flow was shown to be responsible for bromide and C. parvum transport through the soil into the underlying pore space observed during the 4-h experiments. We confirmed this finding by conducting a pair of saturated soil column studies under homogeneously repacked conditions with no macropores in which no C. parvum transport was observed in the effluent. The linear mixed-effects and logistic regression models developed from the soilbox experiments provide a basis for estimating macropore hydraulic properties and the risk of C. parvum transport through shallow soils from bulk density, precipitation, and total shallow subsurface flow rate. The risk assessment is consistent with the reported occurrence of oocysts in springs or groundwater from fractured or karstic rocks protected only by shallow overlying soils.

Survey of dairy housing and manure management practices in California.

In 2007, a descriptive survey was mailed to all dairies in Glenn (G) and Tulare (T) Counties to identify current and future opportunities of manure management practices on California dairies. The purpose was to provide baseline information for development of outreach curriculum and a decision support tool to quantify potential benefits of various N management options on dairy farms. Such baseline information is valuable to staff regulating dairy facilities (e.g., San Joaquin Valley Unified Air Pollution Control District and Central Valley Regional Water Quality Control Board), dairy trade association representatives, and technology vendors. Response rates for each county were similar at 29.7% (n=19; G) and 26.7% (n=88; T). Mean milking herd size averaged 570 (range 50 to 3,000) cows in G and 1,800 (range 196 to 9,286) cows in T. Survey data are reported by location due to differences between counties in herd size, housing facilities, and climate. Freestalls are common housing facilities (63.2%, G; 38.6%, T) and separated solids and corral scrapings are commonly used as bedding in freestalls (81.8% G and 79.4% T). The most common methods of manure collection were flushing and scraping (18.8%, G; 44.7%, T), only flushing (43.8%, G; 34.1%, T), or only scraping daily or less frequently than daily (37.5%, G; 20.0%, T). Most dairy farms in G (63.2%) and T (70.5%) used some method of separating solids from liquids. However, mechanical separation systems alone were used by 5.3% G and 11.4% T of dairy farms. Storage or treatment ponds were found on 95.9% of dairies. Respondents identified existing manure management practices and did not indicate any new technologies were in use or being considered for manure management. Survey results were used to describe the 2 predominant manure management pathways of manure collection, storage, treatment, and utilization. Survey results will be used to develop and disseminate targeted information on manure treatment technologies, and on-farm evaluation of implemented technologies related to anaerobic digesters, solid liquid separation, and pond additives.

Survey of management practices related to bovine respiratory disease in preweaned calves on California dairies

In the spring of 2013, a survey of California (CA) dairies was performed to characterize management practices related to bovine respiratory disease in preweaned calves, compare these practices across geographic regions of the state, and determine the principal components that explain the variability in management between herds. The questionnaire consisted of 53 questions divided into 6 sections to assess management practices affecting dairy calves from precalving to weaning. The questionnaire was mailed to 1,523 grade A licensed dairies in CA and 224 responses (14.7%) were collected. Survey response rates were similar over the 3 defined regions of CA: northern CA, northern San Joaquin Valley, and the greater southern CA region. The mean size of respondent herds was 1,423 milking cows. Most dairies reported raising preweaned calves on-site (59.7%). In 93.3% of dairies, preweaned calves were raised in some form of individual housing. Nonsaleable milk was the most frequent liquid diet fed to preweaned heifers (75.2%). Several important differences were identified between calf-raising practices in CA and practices reported in recent nationwide studies, including herd sizes, housing practices, and sources of milk fed to heifers. The differences between the CA and nationwide studies may be explained by differences in herd size. Regional differences within CA were also identified. Compared with the 2 other regions, northern CA dairies were found to have smaller herds, less Holstein cattle, calves remained with dams for longer periods of time after calving, were more likely to be certified organic dairies, and raised their own calves more often. Principal component analysis was performed and identified 11 components composed of 28 variables (questions) that explained 66.5% of the variability in the data. The identified components and questions will contribute to developing a risk assessment tool for bovine respiratory disease in preweaned dairy calves.

Multidrug residues and antimicrobial resistance patterns in waste milk from dairy farms in Central California

Waste milk (WM) is a common source of feed for preweaned calves in US dairy farms. However, limited information is available about characteristics of this product, including concentration of drug residues and potential hazards from antibiotic-resistant bacteria present in the milk. The aims of this cross-sectional study were to (1) identify and measure the concentration of antimicrobial residues in raw WM samples on dairy farms in the Central Valley of California, (2) survey farm management practices for factors associated with the occurrence of specific antimicrobial residues in raw WM, (3) characterize the antimicrobial resistance patterns of E. coli cultured from raw WM samples, and (4) evaluate the potential association between WM quality parameter and risk of identifying drug residues in milk. A single raw bulk tank WM sample was collected from dairy farms located in Californias Central Valley (n = 25). A questionnaire was used to collect information about farm management practices. Waste milk samples were analyzed for a multidrug residue panel using liquid chromatography-tandem mass spectrometry. Bacteria were cultured and antimicrobial resistance was tested using standard techniques; milk quality parameters (fat, protein, lactose, solids-not-fat, somatic cell count, coliform count, and standard plate count) were also measured. Of the 25 samples collected, 15 (60%) contained detectable concentrations of at least 1 antimicrobial. Of the drug residue-positive samples, 44% (11/25) and 16% (4/25) had detectable concentrations of β-lactams and tetracycline, respectively. The most prevalent drug residues were ceftiofur (n = 7, 28%), oxytetracycline (n = 4, 16%), and cephapirin (n = 3, 12%). No significant associations were identified between farm characteristics or management practices and presence of drug residues in WM. In this study, 20% of farms did not pasteurize WM before feeding to calves. Two of the 10 Escherichia coli isolated from WM samples were multidrug resistant. Streptococcus spp. (n = 21, 84%) was the most common genus cultured from WM samples, followed by Staphylococcus spp. (n = 20, 80%) and E.coli (n = 10, 40%). Mycoplasma spp. was cultured from 2 WM samples (n = 2, 8%). The presence of drug residues in WM at concentrations that increase selection of resistant bacteria indicates the need for additional studies targeting on-farm milk treatments to degrade drug residues before feeding to calves. The presence of multidrug-resistant E. coli in WM urges the need for on-farm practices that reduce calf exposure to resistant bacteria, such as pasteurization.

Regional management practices and prevalence of bovine respiratory disease in California's preweaned dairy calves

The objective of this cross-sectional study was to estimate the prevalence of bovine respiratory disease (BRD) in California preweaned dairy calves and identify management practices that are associated with BRD. A convenience sample of 100 dairies in the 3 distinct dairy regions of California was surveyed. Regions evaluated were Northern California (NCA), northern San Joaquin Valley (NSJV), and greater Southern California (GSCA). A questionnaire on calf management practices and demographic information was administered via in-person interviews at each dairy and a random sample of preweaned calves was evaluated using the California BRD scoring system on the same day. Prevalence of BRD varied between the 3 dairy regions: 9.30% in NCA, 4.51% in NSJV, and 7.35% in GSCA. Breed was not associated with BRD prevalence at the statewide level, but differences in prevalence were observed between breeds across the regions with a higher prevalence in NCA for Jerseys and in GSCA for Holsteins, compared with NSJV. Prevalence of BRD was not different between organic and conventional dairies. Colostrum management practices, including heat treatment and feeding colostrum from multiparous cows, varied by region and were associated with lower BRD prevalence. Calves housed in group pens, a practice observed primarily in NCA, had a higher BRD prevalence than those in individual housing. Feeding salable milk was also more common in NCA and was associated with lower BRD prevalence. Ground and road surfaces adjacent to the calf raising area were also variable by region, and paved surfaces were associated with lower BRD prevalence. Management practices associated with BRD varied across the state and may be addressed to inform the adoption and implementation of potentially protective management decisions on California dairies and other regions with similar dairy systems.

Broadleaf weed control in irrigated pasture containing Trifolium repens

Abstract. Increasing lease and purchase costs for irrigated pasture are encouraging producers to use herbicides to control broadleaf weeds and maximise forage production on their current land base, as opposed to seeking out additional pastureland. There are two challenges to using herbicides to control broadleaf weeds in irrigated pasture. One challenge is that producers often encounter weed species for which herbicide information is limited or non-existent. Another challenge is that broadleaf herbicides tend to damage desirable legumes. We evaluated the efficacy of several broadleaf herbicide options for Symphyotrichum divaricatum, a species not previously the subject of research in irrigated pasture. Additionally, we monitored herbicide impacts on desirable legumes, principally Trifolium repens. We also evaluated control of Convolvulus arvensis and Plantago lanceolata, subjects of considerable herbicide research. Our goal was to identify herbicide options that controlled all three weeds while causing the least damage to legumes. Several rates and combinations of dicamba, diflufenzopyr, triclopyr, MCPA, and 2,4-D provided statistically indistinguishable control of C. arvensis and P. lanceolata, with point estimates suggesting 66–88% control in 2011 and 43–86% control in 2012. 2,4-D + triclopyr appeared to provide the best control of P. lanceolata and C. arvensis, with point estimates for high rates indicating nearly 100% control in both years. However, this combination was particularly damaging to legumes. Based on these findings, we recommend 2,4-D + triclopyr where desirable legumes are absent. Where desirable legumes are present, we recommend 2,4-D alone. Whereas 2,4-D alone appeared not to perform as well as 2,4-D + triclopyr at controlling S. divaricatum in 2012, it was less damaging to desirable legumes.