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Featured researches published by Brendan P. Brooke.


Geophysical Research Letters | 2010

Response of coral reefs to climate change: Expansion and demise of the southernmost Pacific coral reef

Colin D. Woodroffe; Brendan P. Brooke; Michelle Linklater; David M. Kennedy; Brian G. Jones; Cameron Buchanan; Richard Mleczko; Quan Hua; Jian-xin Zhao

Received 21 May 2010; revised 20 June 2010; accepted 6 July 2010; published 3 August 2010. [1] Coral reefs track sea level and are particularly sensitive to changes in climate. Reefs are threatened by global warming, with many experiencing increased coral bleaching. Warmer sea surface temperatures might enable reef expansion into mid latitudes. Here we report multibeam sonar and coring that reveal an extensive relict coral reef around Lord Howe Island, which is fringed by the southernmost reef in the Pacific Ocean. The relict reef, in water depths of 25–50 m, flourished in early Holocene and covered an area more than 20 times larger than the modern reef. Radiocarbon and uranium‐series dating indicates that corals grew between 9000 and 7000 years ago. The reef was subsequently drowned, and backstepped to its modern limited extent. This relict reef, with localised re‐establishment of corals in the past three millennia, could become a substrate for reef expansion in response to warmer temperatures, anticipated later this century and beyond, if corals are able to recolonise its surface. Citation: Woodroffe, C. D., B. P. Brooke, M. Linklater, D. M. Kennedy, B. G. Jones, C. Buchanan, R. Mleczko, Q. Hua, and J. Zhao (2010), Response of coral reefs to climate change: Expansion and demise of the southernmost Pacific coral reef, Geophys. Res. Lett., 37, L15602, doi:10.1029/2010GL044067.


International Journal of Geographical Information Science | 2012

Predictive modelling of seabed sediment parameters using multibeam acoustic data: a case study on the Carnarvon Shelf, Western Australia

Zhi Huang; Scott L. Nichol; Justy Siwabessy; James J. Daniell; Brendan P. Brooke

Seabed sediment textural parameters such as mud, sand and gravel content can be useful surrogates for predicting patterns of benthic biodiversity. Multibeam sonar mapping can provide near-complete spatial coverage of high-resolution bathymetry and backscatter data that are useful in predicting sediment parameters. Multibeam acoustic data collected across a ∼1000 km2 area of the Carnarvon Shelf, Western Australia, were used in a predictive modelling approach to map eight seabed sediment parameters. Four machine learning models were used for the predictive modelling: boosted decision tree, random forest decision tree, support vector machine and generalised regression neural network. The results indicate overall satisfactory statistical performance, especially for %Mud, %Sand, Sorting, Skewness and Mean Grain Size. The study also demonstrates that predictive modelling using the combination of machine learning models has provided the ability to generate prediction uncertainty maps. However, the single models were shown to have overall better prediction performance than the combined models. Another important finding was that choosing an appropriate set of explanatory variables, through a manual feature selection process, was a critical step for optimising model performance. In addition, machine learning models were able to identify important explanatory variables, which are useful in identifying underlying environmental processes and checking predictions against the existing knowledge of the study area. The sediment prediction maps obtained in this study provide reliable coverage of key physical variables that will be incorporated into the analysis of covariance of physical and biological data for this area.


Journal of Coastal Research | 2008

Rates of Shoreline Progradation during the Last 1700 Years at Beachmere, Southeastern Queensland, Australia, Based on Optically Stimulated Luminescence Dating of Beach Ridges

Brendan P. Brooke; Roland Lee; Malcolm Cox; Jon Olley; Tim Pietsch

Abstract The optically stimulated luminescence (OSL) dating method was used to determine the geochronology of seven relict beach ridges that sit immediately behind the modern beach at Beachmere, a low-energy sandy coast within Moreton Bay, Queensland. Between 2600 ± 400 and 1700 ± 130 years ago, the shoreline eroded and foreshore sediment was deposited over the older beach deposit. Subsequently, there was a 1500-year period of shoreline progradation: the shoreline advanced 0.16 m/y between 1700 ± 130 and 1140 ± 80 years ago; and 0.41 m/y between 1140 ± 80 and around 200 years ago. Shortly after 690 ± 60 years ago, a series of well-developed regularly spaced beach ridges gave way to an intertidal flat and then deposition of a set of lower amplitude, closely spaced beach ridges. The younger ridges were deposited between 230 ± 40 and 140 ± 50 years ago, at a rate of around 1.06 m/y. During the last several decades, much of the Beachmere shoreline has eroded into these younger relict ridges. Drivers of these changes in shoreline sedimentary regime are yet to be accurately determined; however, it seems likely they are related to switches that occur in the nearshore sand transport pathway. Our results demonstrate the utility of the OSL method for providing insights into coastal change that occurred in the historical and recent geological period. Better understanding the tempo of shoreline change in the recent past is particularly relevant for assessments of vulnerability to erosion of rapidly developing, low-lying sandy coasts such as northern Moreton Bay.


Journal of Coastal Research | 2006

Geomorphological Evolution of Lord Howe Island and Carbonate Production at the Latitudinal limit to Reef Growth

Colin D. Woodroffe; David M. Kennedy; Brendan P. Brooke; Mark E. Dickson

Abstract Lord Howe Island is a volcanic island, rising to over 800 m, draped with Late Quaternary submarine and subaerial carbonate sediments. The island and neighbouring islets lie within a chain of seamounts and is presently at or close to the latitudinal limit to coral reef growth. Lord Howe Island and adjacent Balls Pyramid, composed of the basalts erupted around 6 million years ago, sit near the middle of broad shelves on separate peaks of one major volcanic edifice. The central part of the Lord Howe Island is covered by calcarenite that was deposited primarily as dunes (eolianite), but with isolated beach units. Uranium-series, amino acid racemisation, and thermoluminescence dating indicate that many of these were deposited during marine oxygen isotope stage 5. Eolianite units stratigraphically below the beach deposits are of penultimate interglacial, or in places perhaps older, age. Different suites of erosional landforms are associated with different lithologies. Towering plunging cliffs characterise the resistant Mount Lidgbird Basalt, in some cases fringed with large talus slopes. On less resistant lithologies or where nearshore topography means greater wave force as a result of waves breaking, there are shore platforms. Slumping cliffs abut broad erosional platforms on the poorly lithified calcarenite. A fringing reef on the western side of Lord Howe Island, the southernmost coral reef in the Pacific, is dominated by coral and coralline algae. Carbonate sediments veneering the shelf around the islands contain a more temperate biota. Located at the southern limit of reef-forming seas, but apparently having undergone erosion for much of its history outside of reef seas, Lord Howe Island provides insights into marine planation of volcanic islands close to what has been termed the Darwin Point. It represents the initial stages of fringing reef development on a volcanic island. Middleton and Elizabeth Reefs, north of Lord Howe Island, have the morphology of coral atolls and appear to be gradually subsiding. The Darwinian sequence, fringing reef to atoll, appears particularly compressed in this chain of islands. However, a fossil reef in water depths of around 30 m on the shelf around Lord Howe Island, of unknown age, implies a more complex history.


Marine and Freshwater Research | 2004

The relationship between sediment and water quality, and riverine sediment loads in the wave-dominated estuaries of south-west Western Australia

Lynda Radke; Ian P. Prosser; M. Robb; Brendan P. Brooke; D. Fredericks; Grant Douglas; J. Skemstad

We examine surface sediment and water column total nutrient and chlorophyll a concentrations for 12 estuaries with average water depths <4 m, and calculated sediment loads ranging from 0.2 to 10.8 kg m−2 year−1. Sediment total nitrogen, phosphorus and organic carbon concentrations vary inversely with sediment loads due to: (i) the influx of more mineral-rich sediment into the estuaries; and (ii) increasing sediment sulfidation. Sediment total organic carbon (TOC) : total sulfur (TS) and TS : Fe(II) ratios correlated to sediment loads because enhanced sedimentation increases burial, hence the importance of sulfate reduction in organic matter degradation. Curvilinear relationships were found between a weathering index and organic matter δ13C in sediment, and sediment load. The rising phase of the curve (increasing weathering, lighter isotopic values) at low to intermediate loads relates to soil erosion, whereas regolith or bedrock erosion probably explains the declining phase of the curve (decreasing weathering, heavier isotopic values) at higher sediment loads. The pattern of change for water column total nutrients (nitrogen and phosphorus) with sediment loads is similar to that of the weathering index. Most water quality problems occur in association with soil erosion, and at sediment loads that are intermediate for the estuaries studied. Limited evidence is presented that flushing can moderate the impact of sediment loads upon the estuaries.


International Journal of Digital Earth | 2016

Rapid, high-resolution detection of environmental change over continental scales from satellite data – the Earth Observation Data Cube

Adam Lewis; Leo Lymburner; Matthew B. J. Purss; Brendan P. Brooke; Benjamin J. K. Evans; Alex Ip; Arnold G. Dekker; James R. Irons; Stuart Minchin; Norman Mueller; Simon Oliver; Dale Roberts; Barbara Ryan; Medhavy Thankappan; Robert Woodcock; Lesley Wyborn

ABSTRACT The effort and cost required to convert satellite Earth Observation (EO) data into meaningful geophysical variables has prevented the systematic analysis of all available observations. To overcome these problems, we utilise an integrated High Performance Computing and Data environment to rapidly process, restructure and analyse the Australian Landsat data archive. In this approach, the EO data are assigned to a common grid framework that spans the full geospatial and temporal extent of the observations – the EO Data Cube. This approach is pixel-based and incorporates geometric and spectral calibration and quality assurance of each Earth surface reflectance measurement. We demonstrate the utility of the approach with rapid time-series mapping of surface water across the entire Australian continent using 27 years of continuous, 25 m resolution observations. Our preliminary analysis of the Landsat archive shows how the EO Data Cube can effectively liberate high-resolution EO data from their complex sensor-specific data structures and revolutionise our ability to measure environmental change.


International Journal of Geographical Information Science | 2012

Developing physical surrogates for benthic biodiversity using co-located samples and regression tree models: a conceptual synthesis for a sandy temperate embayment

Zhi Huang; Matthew A. McArthur; Lynda Radke; Tara J. Anderson; Scott L. Nichol; Justy Siwabessy; Brendan P. Brooke

Marine physical and geochemical data can be valuable surrogates for predicting the distributions and assemblages of marine species. This study investigated the bio-environment (surrogacy) relationships in Jervis Bay, a sandy marine embayment in south-eastern Australia. A wide range of co-located physical data were analysed together with biological data, including multibeam bathymetry and backscatter surfaces and derivatives, parameters that describe seabed sediment and water column physical/geochemical characteristics and seabed exposure. Three decision tree models and a robust model selection process were applied. The models for three diversity indices and seven out of eight infaunal species explained 32–79% of the variance. A diverse range of physical surrogates for biodiversity were identified. The surrogates are presented in a conceptual model that identifies the mechanisms that potentially link to biodiversity patterns. While some surrogates may exert direct influence over organisms to exposure and chlorophyll-a, for example, most pointed to complex relationships between multiple biological and physical factors occurring in different process domains/zones. The reliable bio-environment relationships identified from co-located samples and conceptual models enabled a mechanistic understanding of benthic biodiversity patterns in a sandy coastal embayment that may have implications for marine environmental management.


Journal of remote sensing | 2010

Broad-scale geomorphology and benthic habitats of the Perth coastal plain and Rottnest Shelf, Western Australia, identified in a merged topographic and bathymetric digital relief model

Brendan P. Brooke; John Creasey; Mike Sexton

A digital relief model (DRM) of the Swan Coastal Plain and Rottnest Shelf (7400 km2) was built with a range of topographic and high-resolution bathymetric datasets, gridded to a 50 m cell size. The DRM enabled the delineation of relict coastal landforms, benthic habitats and development of a regional morphostratigraphic framework. Well-defined features include: (1) limestone ridges on the coastal plain that sit subparallel to the modern shoreline and were largely formed as coastal dune barriers during or shortly after Quaternary interglacial periods of high sea level; (2) rocky reefs on the inner shelf that rise up to 10 m above the adjacent seafloor, which are remnants of coastal dune barriers that formed when the sea level was 20–30 m lower than present and (3) a discontinuous ridge 3–10 m high along much of the outer shelf, which likely represents a coastal barrier that formed when the sea level was around 60 m lower than present. The DRM provides a useful regional perspective of the distribution and form of these extensive reefs.


Environmental Chemistry | 2010

Delineation of sediment sources to a coastal wetland in the Great Barrier Reef catchment: influence of climate variability and land clearing since European arrival

Grant Douglas; Mio Kuhnen; Lynda Radke; Gary Hancock; Brendan P. Brooke; M. Palmer; Tim Pietsch; Phillip W. Ford; Michael G. Trefry; R. Packett

Environmental context. Undisturbed sediments provide a record to past events in a catchment. In this study we examine changes in sources of sediment and their variation over the past century due to changes in climate and extensive modification of the catchment after European settlement. We also highlight how multiple lines of forensic evidence acquired from the sediments can be used to reconstruct catchment history over a range of timescales. Abstract. Enhanced delivery of sediment and nutrients to the Great Barrier Reef has the potential to profoundly influence ecological processes in this natural icon. Within the Fitzroy River Basin (FRB) of north-eastern Australia, natural impoundments such as Crescent Lagoon provide an invaluable archive of accumulated sediment that can be dated using multiple techniques to reconstruct the history of sediment export. During the last century, net rates of accumulation of sediment remain similar; however, large variations in sediment sources are apparent. A major sedimentary and geochemical discontinuity is present between ~45 to 29 years before present. Within this time interval a redox front is preserved corresponding to a change in organic matter influx; C3 plant detritus derived from the onset of broadscale agriculture within the FRB provided an assimilable carbon source resulting in more reducing conditions within the sediments. Statistical correlations demonstrate a notable correspondence between some sediment fractions supporting the notion of a short-lived disturbance to the sedimentation regime in the 1960–70s.


Environmental Chemistry | 2008

Fitzroy River Basin, Queensland, Australia. III. Identification of sediment sources in the coastal zone

J. Smith; Grant Douglas; Lynda Radke; M. Palmer; Brendan P. Brooke

Environmental context. The Fitzroy River Basin is a major source of suspended sediment and nutrients to the southern Great Barrier Reef lagoon. A reduction in sediment and nutrient loads is necessary to protect coastal reefs and this requires an understanding of the sediment sources. The present geochemical and modelling study provides a quantitative estimate of the spatial and temporal variations in the sources of sediment deposited in the Fitzroy River coastal zone. Abstract. Sediment sources to the Fitzroy River coastal zone have been identified and quantified using an integrated geochemical and modelling approach. The coastal sediments display little geochemical variation as a result of substantial homogenisation during hydrodynamic processes and indicate a sediment composition consistent with derivation from mixed catchment sources. A lack of substantial temporal geochemical variation in the sediment records indicates weathering regimes and hydrodynamic transport have been relatively consistent throughout the Holocene. Despite this apparent geochemical homogeneity, a modelling approach using a Bayesian statistical model revealed changes in catchment sediment sources over time. Variations in the occurrence and intensity of rainfall events in different parts of the catchment as well as land-use changes following European settlement are likely to have had a substantial effect on the relative contributions of the catchment sources delivered to and deposited in the coastal zone. Additionally, large variations in flow events and variable estuary hydrodynamics result in different catchment soil types being delivered and deposited under different conditions. The present study found that basaltic material is the dominant catchment source in the coastal surface sediments with an estimated enrichment of ~3 relative to catchment and estuary abundances. Basaltic soils present as a more recent and extensive, weathered surficial cover are more readily mobilised than other catchment soils and will be transported further within freshwater flood plumes. It is likely that in large flood events, this basaltic material may reach the coral-dominated outer shelf. Improved land management practices to reduce sediment loads can be targeted to the areas supplying the majority of sediment to the coastal zone.

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