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Dive into the research topics where Brian A. Clarke is active.

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Featured researches published by Brian A. Clarke.


Molecular Cell | 2004

The IGF-1/PI3K/Akt Pathway Prevents Expression of Muscle Atrophy-Induced Ubiquitin Ligases by Inhibiting FOXO Transcription Factors

Trevor N. Stitt; Doreen Drujan; Brian A. Clarke; Frank Panaro; Yekatarina Timofeyva; William O. Kline; Michael Gonzalez; George D. Yancopoulos; David J. Glass

Skeletal muscle size depends upon a dynamic balance between anabolic (or hypertrophic) and catabolic (or atrophic) processes. Previously, no link between the molecular mediators of atrophy and hypertrophy had been reported. We demonstrate a hierarchy between the signals which mediate hypertrophy and those which mediate atrophy: the IGF-1/PI3K/Akt pathway, which has been shown to induce hypertrophy, prevents induction of requisite atrophy mediators, namely the muscle-specific ubiquitin ligases MAFbx and MuRF1. Moreover, the mechanism for this inhibition involves Akt-mediated inhibition of the FoxO family of transcription factors; a mutant form of FOXO1, which prevents Akt phosphorylation, thereby prevents Akt-mediated inhibition of MuRF1 and MAFbx upregulation. Our study thus defines a previously uncharacterized function for Akt, which has important therapeutic relevance: Akt is not only capable of activating prosynthetic pathways, as previously demonstrated, but is simultaneously and dominantly able to suppress catabolic pathways, allowing it to prevent glucocorticoid and denervation-induced muscle atrophy.


Nature Cell Biology | 2001

Mediation of IGF-1-induced skeletal myotube hypertrophy by PI(3)K/Akt/mTOR and PI(3)K/Akt/GSK3 pathways

Christian Rommel; Sue C. Bodine; Brian A. Clarke; Roni Rossman; Lorna Nunez; Trevor N. Stitt; George D. Yancopoulos; David J. Glass

Skeletal muscle is composed of multinucleated fibres, formed after the differentiation and fusion of myoblast precursors. Skeletal muscle atrophy and hypertrophy refer to changes in the diameter of these pre-existing muscle fibres. The prevention of atrophy would provide an obvious clinical benefit; insulin-like growth factor 1 (IGF-1) is a promising anti-atrophy agent because of its ability to promote hypertrophy. However, the signalling pathways by which IGF-1 promotes hypertrophy remain unclear, with roles suggested for both the calcineurin/NFAT (nuclear factor of activated T cells) pathway and the PtdIns-3-OH kinase (PI(3)K)/Akt pathway. Here we employ a battery of approaches to examine these pathways during the hypertrophic response of cultured myotubes to IGF-1. We report that Akt promotes hypertrophy by activating downstream signalling pathways previously implicated in activating protein synthesis: the pathways downstream of mammalian target of rapamycin (mTOR) and the pathway activated by phosphorylating and thereby inhibiting glycogen synthase kinase 3 (GSK3). In contrast, in addition to demonstrating that calcineurin does not mediate IGF-1-induced hypertrophy, we show that IGF-1 unexpectedly acts via Akt to antagonize calcineurin signalling during myotube hypertrophy.


Molecular and Cellular Biology | 2013

Genomic and Proteomic Profiling Reveals Reduced Mitochondrial Function and Disruption of the Neuromuscular Junction Driving Rat Sarcopenia

Chikwendu Ibebunjo; Joel M. Chick; Tracee Kendall; John K. Eash; Christine Li; Yunyu Zhang; Chad Vickers; Zhidan Wu; Brian A. Clarke; Jun Shi; Joseph Cruz; Brigitte Fournier; Sophie Brachat; Sabine Gutzwiller; QiCheng Ma; Judit Markovits; Michelle Broome; Michelle Steinkrauss; Elizabeth Skuba; Jean-Rene Galarneau; Steven P. Gygi; David J. Glass

ABSTRACT Molecular mechanisms underlying sarcopenia, the age-related loss of skeletal muscle mass and function, remain unclear. To identify molecular changes that correlated best with sarcopenia and might contribute to its pathogenesis, we determined global gene expression profiles in muscles of rats aged 6, 12, 18, 21, 24, and 27 months. These rats exhibit sarcopenia beginning at 21 months. Correlation of the gene expression versus muscle mass or age changes, and functional annotation analysis identified gene signatures of sarcopenia distinct from gene signatures of aging. Specifically, mitochondrial energy metabolism (e.g., tricarboxylic acid cycle and oxidative phosphorylation) pathway genes were the most downregulated and most significantly correlated with sarcopenia. Also, perturbed were genes/pathways associated with neuromuscular junction patency (providing molecular evidence of sarcopenia-related functional denervation and neuromuscular junction remodeling), protein degradation, and inflammation. Proteomic analysis of samples at 6, 18, and 27 months confirmed the depletion of mitochondrial energy metabolism proteins and neuromuscular junction proteins. Together, these findings suggest that therapeutic approaches that simultaneously stimulate mitochondrogenesis and reduce muscle proteolysis and inflammation have potential for treating sarcopenia.


Cardiovascular Diabetology | 2015

MuRF2 regulates PPARγ1 activity to protect against diabetic cardiomyopathy and enhance weight gain induced by a high fat diet.

Jun He; Megan T. Quintana; Traci L. Parry; Trisha J. Grevengoed; Jonathan C. Schisler; Joseph A. Hill; Cecelia C. Yates; Rudo F. Mapanga; M. Faadiel Essop; William E. Stansfield; James R. Bain; Christopher B. Newgard; Michael J. Muehlbauer; Yipin Han; Brian A. Clarke; Monte S. Willis

BackgroundIn diabetes mellitus the morbidity and mortality of cardiovascular disease is increased and represents an important independent mechanism by which heart disease is exacerbated. The pathogenesis of diabetic cardiomyopathy involves the enhanced activation of PPAR transcription factors, including PPARα, and to a lesser degree PPARβ and PPARγ1. How these transcription factors are regulated in the heart is largely unknown. Recent studies have described post-translational ubiquitination of PPARs as ways in which PPAR activity is inhibited in cancer. However, specific mechanisms in the heart have not previously been described. Recent studies have implicated the muscle-specific ubiquitin ligase muscle ring finger-2 (MuRF2) in inhibiting the nuclear transcription factor SRF. Initial studies of MuRF2−/− hearts revealed enhanced PPAR activity, leading to the hypothesis that MuRF2 regulates PPAR activity by post-translational ubiquitination.MethodsMuRF2−/− mice were challenged with a 26-week 60% fat diet designed to simulate obesity-mediated insulin resistance and diabetic cardiomyopathy. Mice were followed by conscious echocardiography, blood glucose, tissue triglyceride, glycogen levels, immunoblot analysis of intracellular signaling, heart and skeletal muscle morphometrics, and PPARα, PPARβ, and PPARγ1-regulated mRNA expression.ResultsMuRF2 protein levels increase ~20% during the development of diabetic cardiomyopathy induced by high fat diet. Compared to littermate wildtype hearts, MuRF2−/− hearts exhibit an exaggerated diabetic cardiomyopathy, characterized by an early onset systolic dysfunction, larger left ventricular mass, and higher heart weight. MuRF2−/− hearts had significantly increased PPARα- and PPARγ1-regulated gene expression by RT-qPCR, consistent with MuRF2’s regulation of these transcription factors in vivo. Mechanistically, MuRF2 mono-ubiquitinated PPARα and PPARγ1 in vitro, consistent with its non-degradatory role in diabetic cardiomyopathy. However, increasing MuRF2:PPARγ1 (>5:1) beyond physiological levels drove poly-ubiquitin-mediated degradation of PPARγ1 in vitro, indicating large MuRF2 increases may lead to PPAR degradation if found in other disease states.ConclusionsMutations in MuRF2 have been described to contribute to the severity of familial hypertrophic cardiomyopathy. The present study suggests that the lack of MuRF2, as found in these patients, can result in an exaggerated diabetic cardiomyopathy. These studies also identify MuRF2 as the first ubiquitin ligase to regulate cardiac PPARα and PPARγ1 activities in vivo via post-translational modification without degradation.


Science | 2001

Identification of Ubiquitin Ligases Required for Skeletal Muscle Atrophy

Sue C. Bodine; Esther Latres; Susanne Baumhueter; Venus Lai; Lorna Nunez; Brian A. Clarke; William Poueymirou; Frank Panaro; Erqian Na; Kumar Dharmarajan; Zhen-Qiang Pan; David M. Valenzuela; Thomas M. DeChiara; Trevor N. Stitt; George D. Yancopoulos; David J. Glass


Science | 1999

Differentiation Stage-Specific Inhibition of the Raf-MEK-ERK Pathway by Akt

Christian Rommel; Brian A. Clarke; Sven Zimmermann; Lorna Nunez; Roni Rossman; Kristina Reid; Karin Moelling; George D. Yancopoulos; David J. Glass


Cell Metabolism | 2007

The E3 Ligase MuRF1 Degrades Myosin Heavy Chain Protein in Dexamethasone-Treated Skeletal Muscle

Brian A. Clarke; Doreen Drujan; Monte S. Willis; Leon O. Murphy; Richard A. Corpina; Elena Burova; Sergey V. Rakhilin; Trevor N. Stitt; Cam Patterson; Esther Latres; David J. Glass


Journal of Biological Chemistry | 2001

Characterisation of the glycosylation profiles of Alzheimer's beta secretase protein Asp-2 expressed in a variety of cell lines

Joanne Charlwood; Colin Dingwall; Rosalie Matico; Ishrut Hussain; Kyung Johanson; Stephen Moore; David J. Powell; J. Mark Skehel; Steve Ratcliffe; Brian A. Clarke; John J. Trill; Sharon Sweitzer; Patrick Camilleri


Archive | 2006

Myostatin inhibiting fusion polypeptides and therapeutic methods thereof

David J. Glass; Brian A. Clarke


Journal of Biological Chemistry | 2018

Protein kinase A activation inhibits DUX4 gene expression in myotubes from patients with facioscapulohumeral muscular dystrophy

Joseph Cruz; Nicole Hupper; Liz S. Wilson; John Concannon; Yuan Wang; Berndt Oberhauser; Krystyna Patora-Komisarska; Yunyu Zhang; David J. Glass; Anne-Ulrike Trendelenburg; Brian A. Clarke

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George D. Yancopoulos

Beth Israel Deaconess Medical Center

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Monte S. Willis

University of North Carolina at Chapel Hill

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