C L de Moor

Refined estimates of South African pelagic fish biomass from hydro-acoustic surveys: quantifying the effects of target strength signal attenuation and receiver saturation

The biomass of small pelagic fish species off the coast of South Africa has been monitored since 1984 using hydro-acoustic survey techniques. These time-series of spawner biomass and recruitment estimates form the basis for management of both the South African sardine Sardinops sagax and anchovy Engraulis encrasicolus resources and are central to the setting of annual total allowable catch levels. However, these survey estimates have, for the most part, been treated as relative indices as there are several biases inherent in acoustic survey methodology that remain difficult to quantify. Advances in acoustic technology together with an improved understanding of the major sources of survey errors have enabled estimation of and correction for biases such as receiver saturation, acoustic signal attenuation and target strength. Incorporation of these corrections over the entire time-series has resulted in an improved accuracy of acoustic survey estimates and substantial changes to the biomass estimates of both species, without jeopardising the requirement that the time-series remains comparable throughout its duration. Furthermore, the resultant decrease in the level of uncertainty associated with these abundance estimates has rendered improved utilisation of these resources possible.

Revised estimates of abundance of South African sardine and anchovy from acoustic surveys adjusting for echosounder saturation in earlier surveys and attenuation effects for sardine

Hydro-acoustic surveys have been used to provide annual estimates of May recruitment and November spawner biomass of the South African sardine Sardinops sagax and anchovy Engraulis encrasicolus resources since 1984. These time-series of abundance estimates form the backbone of the assessment of these resources, and consequently the management of the South African sardine and anchovy is critically dependent on them. Upgrades to survey equipment over time have resulted in recent surveys providing more accurate estimates of abundance, yet in order to maintain comparability across the full time-series, estimates of biomass mimicking the old equipment were used for a number of years. In this paper we develop a method to revise the earlier part of the time-series to correct for receiver saturation in the older generation SIMRAD EK400 and EKS-38 echo sounders and to account for attenuation in dense sardine schools. This is applied to provide a revised time-series of biomass estimates for the South African sardine and anchovy resources with associated variance–covariance matrices. Furthermore, the time-series presented here are based on updated acoustic target strength estimates, making this the most reliable time-series currently available for both resources.

Assessing the South African sardine resource: two stocks rather than one?

Sardine Sardinops sagax distributed off the west and south coasts of South Africa have traditionally been assumed to comprise a single well-mixed stock for assessment and management purposes. New research, however, lends weight to the possibility of two stocks in this region. A precautionary management approach thus needs to consider the impact of management decisions on the hypothesised two individual stocks as well as on the resource as a whole. As a first step in this process, Bayesian assessments of South African sardine are presented, which compare results for the traditional single-stock hypothesis with those that follow from a new two-mixing-stock hypothesis. Recruits from the west stock are assumed to move to and remain part of the south stock in annual pulses of varying size. This movement is estimated to be appreciable, and to take place from a substantially more productive west stock to the south stock. This immigration makes a greater contribution to the south-stock biomass than do years of above-average south-stock recruitment. Importantly, this two-mixing-stock hypothesis is shown to be consistent with the data available. Further alternative sardine stock-structure hypotheses suggested by the most recent data are discussed.

The 2004 re-assessment of the South African sardine and anchovy populations to take account of revisions to earlier data and recent record abundances

Hydroacoustic surveys off the coast of South Africa over the early years of the 21st century indicated that both the sardine Sardinops sagax and anchovy Engraulis encrasicolus populations had simultaneously reached record abundances. The South African pelagic fishery is regulated using an Operational Management Procedure (OMP). The OMP in use at that time had been developed using data from the two populations prior to this rapid and substantial increase in abundances. This paper documents the revised assessments that were urgently required to provide a basis to update the OMP. These assessments resulted in a changed perception of the status and productivity of these populations. In particular, estimates of the stock-recruitment relationships and the extent of variation about them, which play a key role in evaluating risk when developing OMPs, altered substantially from estimates derived from earlier assessments.

A review of the assessments of the major fisheries resources in South Africa

The waters off South Africas coastline boast a rich mix of commercially fished species. Quantitative assessments of these marine resources have developed from simple methods first applied in the 1970s, to models that encompass a wide range of methodologies. The more valuable resources have undergone regular assessments in recent decades, with frequencies closely related to the management approach employed for each fishery. Many of these assessments form the operating models used to simulation-test candidate management procedures. This paper provides a comprehensive review of the assessments of 11 of the most important fisheries resources in South Africa. Some assessments use simple biomass dynamics models, whereas others are a hybrid of age- and length-based models, each designed to model the specific characteristics of the resource and fishery concerned. Many of the assessments have been disaggregated by species/stock and/or area as related multispecies/stock/ distribution hypotheses have arisen. This paper explores the similarities and differences in the data available and the methods applied. The review indicates that, whereas the status of three of these resources cannot be estimated reliably at present, the status of six resources is considered to be reasonable to good, whereas that of abalone Haliotis midae and West Coast rock lobster Jasus lalandii remains poor.

Can anchovy age structure be estimated from length distribution data collected during surveys

Historically, a time-series of proportions-at-age 1 from annual November hydro-acoustic surveys has been used to inform the assessment of, and in particular the choice of appropriate values for juvenile and adult natural mortality for, the South African anchovy Engraulis encrasicolus. However, information from direct ageing is limited and almost two decades old. A new method is developed to estimate the annual proportions of anchovy at age 1 directly from the population length distributions estimated from samples taken during the November surveys. This method involves modelling the annual length distributions of age 1 and age 2+ anchovy. The analysis provides a new time-series of proportions-at-age 1, together with associated standard errors, for input into assessments of the resource. The results also caution against the danger of scientists reading more information into data than is really there.