Carol R. Coan

Effects of pH on the exposure of aromatic donor residues in solution topography studies of bovine trypsin by charge transfer

Abstract Fully exposed aromatic amino acid side chains on the surface of proteins can act as donors in the formation of π D −π A ∗ charge transfer complexes with the acceptor 1-methyl-3-carbamidopyridinium chloride (1-methylnicotinamide chloride) (Hinman et al ., 1974). A study of the surface aromatic donor residues of native trypsin in the pH range 3 to 9 indicates that two of the four tryptophan and about five of the ten tyrosine residues are sufficiently exposed to bind MNCl † and give rise to characteristic charge transfer absorption spectra. Between about pH 4 and pH 8, there is an increase in the overall charge transfer absorbance of the system that parallels the pH activity profile of the enzyme. An analysis of the charge transfer properties of the complex at both ends of the pH curve indicates that the observed change is due to an increase in the Trp-MNCl association constant of one of the two exposed tryptophan residues. A similar investigation of the pancreatic trypsin inhibitor-trypsin complex revealed a single available tryptophan residue whose association constant did not change with pH. Other chemical and physical evidence strongly suggests that access to the indole ring of Trp215 is blocked by the bound inhibitor molecule in the inhibitor-trypsin complex, thus implicating Trp215 as the residue with the pH-dependent association constant. If this interpretation is correct, the observed changes in the charge transfer properties of Trp215, whose peptide bond forms a part of the specificity pocket of the enzyme (Krieger et al. , 1974), could serve to monitor conformational rearrangements or flexibility in the region of the enzyme that is directly concerned with the binding of substrates. The implications of the charge transfer study are discussed in terms of the crystal structure models for diisopropylphosphorofluoridate and benzamidine-inhibited trypsins, and are compared with results obtained by other solution techniques used for probing tertiary structure.