Charles A. Schutte

Groundwater controls ecological zonation of salt marsh macrophytes

Ecological zonation of salt marsh macrophytes is strongly influenced by hydrologic factors, but these factors are poorly understood. We examined groundwater flow patterns through surficial sediments in two saltmarshes in the southeastern United States to quantify hydrologic differences between distinct ecological zones. Both sites included tall- or medium-form Spartina alterniflora near the creek bank; short-form Spartina alterniflora in the mid-marsh; salt flats and Salicornia virginica in the high marsh; and Juncus roemarianus in brackish-to-fresh areas adjacent to uplands. Both sites had relatively small, sandy uplands and similar stratigraphy consisting of marsh muds overlying a deeper sand layer. We found significant hydrologic differences between the four ecological zones. In the zones colonized by S. alterniflora, the vertical flow direction oscillated with semi-diurnal tides. Net flow (14-day average) through the tall S. alterniflora zones was downward, whereas the short S. alterniflora zones included significant periods of net upward groundwater flow. An examination of tidal efficiency at these sites suggested that the net flow patterns rather than tidal damping controlled the width of the tall S. alterniflora zone. In contrast to the S. alterniflora zones, hypersaline zones populated by S. virginica were characterized by sustained periods (days) of continuous upward flow of saline water during neap tides. The fresher zone populated by J. roemarianus showed physical flow patterns that were similar to the hypersaline zones, but the upwelling porewaters were fresh rather than saline. These flow patterns were influenced by the hydrogeologic framework of the marshes, particularly differences in hydraulic head between the upland water table and the tidal creeks. We observed increases in hydraulic head of approximately 40 cm from the creek to the upland in the sand layers below both marshes, which is consistent with previous observations that sandy aquifers below fine-grained marsh soils act as conduits for flow from uplands to tidal creeks. This hydrologic framework supports relatively good drainage near the creek, increased waterlogging in the mid-marsh, and the development of hypersalinity adjacent to the freshwater upland. These hydrologic differences in turn support distinct ecological zones.

Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria

Strain HIMB100 is a planktonic marine bacterium in the class Alphaproteobacteria. This strain is of interest because it is one of the first known isolates from a globally ubiquitous clade of marine bacteria known as SAR116 within the family Rhodospirillaceae. Here we describe preliminary features of the organism, together with the draft genome sequence and annotation. This is the second genome sequence of a member of the SAR116 clade. The 2,458,945 bp genome contains 2,334 protein-coding and 42 RNA genes.

What time scales are important for monitoring tidally influenced submarine groundwater discharge? Insights from a salt marsh

Submarine groundwater discharge (SGD) varies significantly across time scales ranging from hours to years, but studies that allow quantitative comparisons between different time scales are few. Most of these studies have focused on beach settings, where the combined variations in fresh and saline SGD can be difficult to interpret. We calculated variations in saline SGD based on a 1 year record of hydraulic head in a salt marsh, where we could isolate variations in saline, tidally driven SGD. Observed SGD varied by an order of magnitude over the course of the year. Groundwater discharge was proportional to tidal amplitude and varied by at least a factor of 2 between spring and neap tides. Monthly average SGD was inversely proportional to average sea level; it increased by nearly a factor of 2 as sea level declined by ∼50 cm from late summer to late winter. This variation was far larger than that predicted by analytic models, owing to the flat topography and inundation of the marsh platform. The effect of short-term (days) variations in sea level associated with wind events and storms was small in comparison. SGD is probably proportional to tidal amplitude in nearly all coastal settings, including beaches. Seasonal variations in sea level may not affect the volume of SGD as significantly in coastal settings where the slope of the intertidal zone is relatively constant, but such variations have the potential to strongly affect the composition of SGD.

Intense nitrogen cycling in permeable intertidal sediment revealed by a nitrous oxide hot spot

Approximately 40% of the total global rate of nitrogen fixation is the result of human activities, and most of this anthropogenic nitrogen is used to fertilize agricultural fields. Approximately 23% of the applied agricultural nitrogen is delivered to the coastal zone, often reducing water quality and driving eutrophication. Nitrogen cycling in coastal sediments can mitigate eutrophication by removing bioavailable nitrogen. However, some of these processes generate nitrous oxide, a potent greenhouse gas, as a by-product. Here we report the discovery of a nitrous oxide production hot spot in shallow barrier island sands. Nitrous oxide concentrations, production and consumption rates, vertical diffusion fluxes, and flux to the atmosphere were measured across triplicate depth profiles. Using a mass balance approach, rates of net nitrous oxide production were estimated to be 40 µmol m−2 d−1. This production was driven by a hot spot of nitrate consumption that removed bioavailable nitrogen from the coastal environment at a rate of 10 mmol m−2 d−1, a rate that is comparable with the highest rates of denitrification reported for coastal sediments.