Charles S. Hopkinson

The changing carbon cycle of the coastal ocean

The carbon cycle of the coastal ocean is a dynamic component of the global carbon budget. But the diverse sources and sinks of carbon and their complex interactions in these waters remain poorly understood. Here we discuss the sources, exchanges and fates of carbon in the coastal ocean and how anthropogenic activities have altered the carbon cycle. Recent evidence suggests that the coastal ocean may have become a net sink for atmospheric carbon dioxide during post-industrial times. Continued human pressures in coastal zones will probably have an important impact on the future evolution of the coastal oceans carbon budget.

Microbial Biogeography along an Estuarine Salinity Gradient: Combined Influences of Bacterial Growth and Residence Time

ABSTRACT Shifts in bacterioplankton community composition along the salinity gradient of the Parker River estuary and Plum Island Sound, in northeastern Massachusetts, were related to residence time and bacterial community doubling time in spring, summer, and fall seasons. Bacterial community composition was characterized with denaturing gradient gel electrophoresis (DGGE) of PCR-amplified 16S ribosomal DNA. Average community doubling time was calculated from bacterial production ([14C]leucine incorporation) and bacterial abundance (direct counts). Freshwater and marine populations advected into the estuary represented a large fraction of the bacterioplankton community in all seasons. However, a unique estuarine community formed at intermediate salinities in summer and fall, when average doubling time was much shorter than water residence time, but not in spring, when doubling time was similar to residence time. Sequencing of DNA in DGGE bands demonstrated that most bands represented single phylotypes and that matching bands from different samples represented identical phylotypes. Most river and coastal ocean bacterioplankton were members of common freshwater and marine phylogenetic clusters within the phyla Proteobacteria, Bacteroidetes, and Actinobacteria. Estuarine bacterioplankton also belonged to these phyla but were related to clones and isolates from several different environments, including marine water columns, freshwater sediments, and soil.

Nitrogen Pollution in the Northeastern United States: Sources, Effects, and Management Options

Abstract The northeastern United States receives elevated inputs of anthropogenic nitrogen (N) largely from net imports of food and atmospheric deposition, with lesser inputs from fertilizer, net feed imports, and N fixation associated with leguminous crops. Ecological consequences of elevated N inputs to the Northeast include tropospheric ozone formation, ozone damage to plants, the alteration of forest N cycles, acidification of surface waters, and eutrophication in coastal waters. We used two models, PnET-BGC and WATERSN, to evaluate management strategies for reducing N inputs to forests and estuaries, respectively. Calculations with PnET-BGC suggest that aggressive reductions in N emissions alone will not result in marked improvements in the acid–base status of forest streams. WATERSN calculations showed that management scenarios targeting removal of N by wastewater treatment produce larger reductions in estuarine N loading than scenarios involving reductions in agricultural inputs or atmospheric emissions. Because N pollution involves multiple sources, management strategies targeting all major pollution sources will result in the greatest ecological benefits.

The changing landscape: ecosystem responses to urbanization and pollution across climatic and societal gradients

Urbanization, an important driver of climate change and pollution, alters both biotic and abiotic ecosystem properties within, surrounding, and even at great distances from urban areas. As a result, research challenges and environmental problems must be tackled at local, regional, and global scales. Ecosystem responses to land change are complex and interacting, occurring on all spatial and temporal scales as a consequence of connectivity of resources, energy, and information among social, physical, and biological systems. We propose six hypotheses about local to continental effects of urbanization and pollution, and an operational research approach to test them. This approach focuses on analysis of “megapolitan” areas that have emerged across North America, but also includes diverse wildland-to-urban gradients and spatially continuous coverage of land change. Concerted and coordinated monitoring of land change and accompanying ecosystem responses, coupled with simulation models, will permit robust foreca...

Linking Ecology and Economics for Ecosystem Management

Abstract This article outlines an approach, based on ecosystem services, for assessing the trade-offs inherent in managing humans embedded in ecological systems. Evaluating these trade-offs requires an understanding of the biophysical magnitudes of the changes in ecosystem services that result from human actions, and of the impact of these changes on human welfare. We summarize the state of the art of ecosystem services–based management and the information needs for applying it. Three case studies of Long Term Ecological Research (LTER) sites—coastal, urban, and agricultural—illustrate the usefulness, information needs, quantification possibilities, and methods for this approach. One example of the application of this approach, with rigorously established service changes and valuations taken from the literature, is used to illustrate the potential for full economic valuation of several agricultural landscape management options, including managing for water quality, biodiversity, and crop productivity.

Relationship between river size and nutrient removal

[1] We present a conceptual approach for evaluating the biological and hydrological controls of nutrient removal in different sized rivers within an entire river network. We emphasize a per unit area biological parameter, the nutrient uptake velocity (nf), which is mathematically independent of river size in benthic dominated systems. Standardization of biological parameters from previous river network models to nf reveals the nature of river size dependant biological activity in these models. We explore how geomorphic, hydraulic, and biological factors control the distribution of nutrient removal in an idealized river network, finding that larger rivers within a basin potentially exert considerable influence over nutrient exports. Citation: Wollheim, W. M.,

Terrestrial inputs of organic matter to coastal ecosystems: An intercomparison of chemical characteristics and bioavailability

Dissolved and particulate organic matter (DOM and POM) collected from rivers or groundwater feeding five estuaries along the east and west coasts of the USA were characterized with a variety of biogeochemical techniques and related to bioavailability to estuarine microbes. Surface water was sampled from the Columbia, Satilla, Susquehanna and Parker Rivers and groundwater was sampled from the Childs River. Several geochemical descriptors (percent organic matter of suspended particulate matter, C/N, lignin phenol content, ratio of vanillic acid to vanillin) suggested an ordering of the systems with respect to POM lability: Satilla < Parker < Columbia < Susquehanna.DOC concentrations in these systems ranged from <100 μM for the Columbia River to >2000 μM for the Satilla River. Elemental analysis of DOM concentrates (>1000 D) was used to predict organic matter composition and to calculate degree of substrate reduction using two different modeling approaches. Models predicted aliphatic carbon ranging between 43 and 60% and aromatic carbon between 26 and 36%, with aliphatic content lowest in the Satilla and highest in the Columbia River. The degree of substrate reduction of the organic matter concentrates followed a pattern similar to that for aliphatic C, being lowest in the Satilla (3.5) and highest in the Columbia (4.0). Extracellular enzyme activity varied broadly across the systems, but again ordered sites in the same way as did aliphatic content and degree of substrate reduction. Bacterial growth rates ranged from 1.3 ug mg-1 d-1 DOC in the Satilla to 1.7 ug mg-1 d-1 DOC in the Parker River. Bioassays confirmed patterns of dissolved organic matter lability predicted by the chemical models. Between 67% to 75% of the variation in bacterial growth could be explained by differences in organic matter composition.

Efficient export of carbon to the deep ocean through dissolved organic matter

Oceanic dissolved organic carbon (DOC) constitutes one of the largest pools of reduced carbon in the biosphere. Estimated DOC export from the surface ocean represents 20% of total organic carbon flux to the deep ocean, which constitutes a primary control on atmospheric carbon dioxide levels. DOC is the carbon component of dissolved organic matter (DOM) and an accurate quantification of DOM pools, fluxes and their controls is therefore critical to understanding oceanic carbon cycling. DOC export is directly coupled with dissolved organic nitrogen and phosphorus export. However, the C:N:P stoichiometry (by atoms) of DOM dynamics is poorly understood. Here we study the stoichiometry of the DOM pool and of DOM decomposition in continental shelf, continental slope and central ocean gyre environments. We find that DOM is remineralized and produced with a C:N:P stoichiometry of 199:20:1 that is substantially lower than for bulk pools (typically >775:54:1), but greater than for particulate organic matter (106:16:1—the Redfield ratio). Thus for a given mass of new N and P introduced into surface water, more DOC can be exported than would occur at the Redfield ratio. This may contribute to the excess respiration estimated to occur in the interior ocean. Our results place an explicit constraint on global carbon export and elemental balance via advective pathways.

The Relationships Among Man's Activities in Watersheds and Estuaries: A Model of Runoff Effects on Patterns of Estuarine Community Metabolism

Activities of man in rivers and their watersheds have altered enormously the timing, magnitude, and nature of inputs of materials to estuaries. Despite an awareness of large-scale, long-term changes in river-estuarine watersheds, we do not fully understand the consequences to estuarine ecosystems of these activities. Deforestation, urbanization, and agriculturalization have changed the timing and nature of material inputs to estuaries. Conversion of land from forest to almost any other land use promotes overland flow of storm runoff; increases the timing, rate and magnitude of runoff; and increases sediment, organic matter, and inorganic nutrient export. It has been estimated that total organic carbon levels in rivers have increased by a factor of 3–5 over natural levels. Man’s activities have also changed the magnitude of particulate organic carbon relative to dissolved organic carbon export and the lability of the organic matter. Historically, rivers and streams had different features than they do today. Two of man’s activities that have had pronounced effects on the timing and quality of river water are channelization and damming. Agricultural drainage systems, channelized and deepened streams, and leveeing and prevention of overbank flooding have had the combined effect of increasing the amplitude and rate of storm runoff, increasing sediment load, increasing nutrient delivery downstream, and decreasing riparian wetland productivity. Dams on the other hand have altered natural discharge patterns and altered the downstream transfer of sediments, organic matter, and nutrients. Patterns of estuarine community metabolism are sensitive to variations, in the timing, magnitude, and quality of material inputs from watersheds. The autotrophic-heterotrophic nature of an estuary is determined by three primary factors: the ratio of inorganic to organic matter inputs, water residence time, and the overall lability of allochthonous organic matter inputs. A simulation model is used to explore the effects of man’s activities in watersheds on the spatial patterns of production and respiration in a generalized estuarine system. Examined are the effects of variations in the ratios of inorganic and organic nitrogen loading, the residence time of water in the estuary, the degradability of allochthonous organic matter, and the ratio of dissolved to particulate organic matter inputs. Simulations suggest that the autotrophic-heterotrophic balance in estuaries is more sensitive to variations in organic matter loading than inorganic nutrient loading. Water residence time and flocculation-sedimentation of organic matter are two physical factors that most effect simulated spatial patterns of metabolism in estuaries.

Decomposition of dissolved organic matter from the continental margin

Decomposition of dissolved organic carbon, nitrogen and phosphorus (DOC, DON, DOP) was measured for surface and bottom waters of the middle Atlantic bight (MAB) and deep slope water adjacent to the MAB on two occasions in March and August 1996. We used standard bottle incubation techniques to measure the decrease in dissolved organic matter (DOM) concentrations over a 180-day interval. Generally DOM concentrations in the MAB were elevated (125mM DOC, 10.2mM DON and 0.30mM DOP) relative to the surface ocean and deep slope water (46.7mM DOC, 2.76mM DON, 0.03mM DOP). On average the C:N:P ratio of shelf DOM (431:36:1) was substantially higher than the Redfield ratio, but not nearly as high for that of deep slope water (2700:215:1). Decomposition time course data were fit to a three-pool (very labile, labile, and recalcitrant pools) multi-G model using a Marquardt fitting routine. The threepool model was superior to a simple exponential decay model assuming a single pool of DOM. We observed no significant changes in concentration of DOM in deep-water samples, attesting to the old age of this material, its recalcitrant nature, and the cleanliness of our technique for measuring decomposition. There were major differences in the relative amount of very labile, labile and recalcitrant fractions of shelf-water DOC, DON and DOP as a result of preferential remineralization of P over N and N over C. Averaged over stations, the decomposable portion of the bulk DOC, DON and DOP pools increased from 30% to 40% to 81% for C, N and P. There was a wide range in decay coefficients for the very labile and labile DOM pools: average decay coefficient for the very labile pool was 0.219 d � 1 , and 0.018 d � 1 for the labile pool. Average half-lives calculated from the decay coefficients were 4, 12 and 8 days for the very labile DOC, DON and DOP pools, and 54, 113 and 90 days for the labile DOC, DON and DOP pools. On the basis of pool turnover times relative to shelf-water residence time (B100 days) we conclude that autochthonous algal production is the source of the very labile DOM pools. Its rate of production is sufficient to sustain estimated rates of bacteria C demand in continental margins. Our results for the MAB indicate that while substantial amounts of DOM are remineralized in the same time frame as shelf-water residence time, there is substantial DOM remaining that is depleted in N and P relative to C. Strong concentration gradients in DOM occur between shelf and ocean waters and between surface and deeper waters. Coupled with appropriate vertical and horizontal advective and eddy diffusive transports, DOM export from the MAB and other shelf systems may be a significant component of ocean C dynamics. r 2002 Elsevier Science Ltd. All rights reserved.