Charlotte E. Norris

Extraction and Analysis of Microbial Phospholipid Fatty Acids in Soils.

Phospholipid fatty acids (PLFAs) are key components of microbial cell membranes. The analysis of PLFAs extracted from soils can provide information about the overall structure of terrestrial microbial communities. PLFA profiling has been extensively used in a range of ecosystems as a biological index of overall soil quality, and as a quantitative indicator of soil response to land management and other environmental stressors. The standard method presented here outlines four key steps: 1. lipid extraction from soil samples with a single-phase chloroform mixture, 2. fractionation using solid phase extraction columns to isolate phospholipids from other extracted lipids, 3. methanolysis of phospholipids to produce fatty acid methyl esters (FAMEs), and 4. FAME analysis by capillary gas chromatography using a flame ionization detector (GC-FID). Two standards are used, including 1,2-dinonadecanoyl-sn-glycero-3-phosphocholine (PC(19:0/19:0)) to assess the overall recovery of the extraction method, and methyl decanoate (MeC10:0) as an internal standard (ISTD) for the GC analysis.

Tracking Stable Isotope Enrichment in Tree Seedlings with Solid-State NMR Spectroscopy

Enriching plant tissues with 13C and 15N isotopes has provided long-lasting, non-reactive tracers to quantify rates of terrestrial elemental fluxes (e.g., soil organic matter decomposition). However, the molecular location and level of isotope enrichment may differ among plant tissues. This factor is central to the integrity and interpretation of tracer data, but is seldom considered in experiments. We propose a rapid, non-destructive method to quantify molecular isotope allocation using solid-state 13C and 15N nuclear magnetic resonance spectroscopy. With this method, we tracked and quantified the fate of multiple pulses of 13CO2(g) and K 15NO3(l) in boreal tree seedling roots and leaves as a function of time. Results show that initial preferential 13C carbohydrate enrichment in the leaves was followed by redistribution to more complex compounds after seven days. While 13C allocation within the roots was uniform across molecules, 15N results indicate an initial enrichment of amine molecules after two hours.

Carbon and nitrogen in the silt-size fraction and its HCl-hydrolysis residues from coarse-textured Canadian boreal forest soils

Preston, C. M., Norris, C. E., Bernard, G. M., Beilman, D. W., Quideau, S. A. and Wasylishen, R. E. 2014. Carbon and nitrogen in the silt-size fraction and its HCl-hydrolysis residues from coarse-textured Canadian boreal forest soils. Can. J. Soil Sci. 94: 157-168. Improving the capacity to predict changes in soil carbon (C) stocks in the Canadian boreal forest requires better information on the characteristics and age of soil carbon, especially more slowly cycling C in mineral soil. We characterized C in the silt-size fraction, as representative of C stabilized by mineral association, previously isolated in a study of soil profiles of four sandy boreal jack pine sites. Silt-size fraction accounted for 13-31% of the total soil C and 12-51% of the total soil N content. Solid-state 13C nuclear magnetic resonance spectroscopy showed that silt C was mostly dominated by alkyl and O,N-alkyl C, with low proportions of aryl C in most samples. Thus, despite the importance of fire in this region, there was little evidence of storage of pyrogenic C. We used HCl hydrolysis to isolate the oldest C within the silt-size fraction. Consistent with previous studies, this procedure removed 21-74% of C and 74-93% of N, leaving residues composed mainly of alkyl and aryl C. However, it failed to isolate consistently old C; 11 out of 16 samples had recent 14C ages (fraction of modern 14C > 1), although C-horizon samples were older, with Δ14C from -17 to -476‰. Our results indicate relatively young ages for C associated with the silt-size fractions in these sites, for which mineral soil C storage may be primarily limited by good drainage and coarse soil texture, exacerbated by losses due to periodic wildfire.

Assessing structural and functional indicators of soil nitrogen availability in reclaimed forest ecosystems using 15N-labelled aspen litter

Abstract: Landscape-level disturbance is a reality in many parts of the world including the Athabasca oil sands region, Canada, and soils play an essential part in the overall reclamation process. Soils are reconstructed during reclamation to provide a foundation and a nutrient source for the novel ecosystems. However, reclamation is often monitored through structural indicators of soil quality, which may not reflect dynamic ecosystem functions such as nutrient cycling. Our objective was to determine if nutrient cycling was occurring on novel ecosystems and if standard structural measures of soil quality were appropriate indicators. We assessed soil quality and nitrogen cycling in reclaimed, harvested and undisturbed aspen forest sites following the addition of 15N-labelled aspen (Populus tremuloides Michx.) leaf litter to the soil surface. Structural soil quality indicators, including soil moisture and microbial carbon and nitrogen biomass, were higher on the undisturbed site, whereas soil microbial composition differed among sites. Yet, uptake of 15N by microbes and plants, which continued throughout the 52 mo field incubation, was comparable across all sites. These results indicate that differences in structural attributes between disturbed and undisturbed soils do not necessarily translate into differences in soil functioning related to nitrogen cycling. Instead, this case study supports exploring the use of stable isotope tracers to assess dynamic soil function indicators in reclaimed ecosystems. Being able to follow biogeochemical cycling as vegetation becomes established and new forests start to develop following reclamation is key to assessing the long-term sustainability of these novel ecosystems.