Chris Medcraft

Geometries of H2S⋯MI (M = Cu, Ag, Au) complexes studied by rotational spectroscopy: The effect of the metal atom.

Complexes formed between H2S and each of CuI, AgI, and AuI have been isolated and structurally characterised in the gas phase. The H2S⋯MI complexes (where M is the metal atom) are generated through laser vaporisation of a metal rod in the presence of a low concentration of H2S and CF3I in a buffer gas of argon undergoing supersonic expansion. The microwave spectra of six isotopologues of each of H2S⋯CuI, H2S⋯AgI and three isotopologues of H2S⋯AuI have been measured by chirped-pulse Fourier transform microwave spectroscopy. The spectra are interpreted to determine geometries for the complexes and to establish the values of structural parameters. The complexes have Cs symmetry at equilibrium and have a pyramidal configuration about the sulfur atom. The local C2 axis of the hydrogen sulfide molecule intersects the linear axis defined by the three heavy atoms at an angle, ϕ = 75.00(47)° for M = Cu, ϕ = 78.43(76)° for M = Ag, and ϕ = 71.587(13)° for M = Au. The trend in the molecular geometries is consistent with significant relativistic effects in the gold-containing complex. The force constant describing the interaction between the H2S and MI sub-units is determined from the measured centrifugal distortion constant, ΔJ, of each complex. Nuclear quadrupole coupling constants, χaa(M) and χaa(I) (where M denotes the metal atom), are determined for H2S⋯CuI and H2S⋯AuI for the first time.

High-Resolution Rotational Spectroscopy Study of the Smallest Sugar Dimer: Interplay of Hydrogen Bonds in the Glycolaldehyde Dimer

Molecular recognition of carbohydrates plays an important role in nature. The aggregation of the smallest sugar, glycolaldehyde, was studied in a conformer-selective manner using high-resolution rotational spectroscopy. Two different dimer structures were observed. The most stable conformer reveals C2 -symmetry by forming two intermolecular hydrogen bonds, giving up the strong intramolecular hydrogen bonds of the monomers and thus showing high hydrogen bond selectivity. By analyzing the spectra of the (13) C and (18) O isotopologues of the dimer in natural abundance, we could precisely determine the heavy backbone structure of the dimer. Comparison to the monomer structure and the complex with water provides insight into intermolecular interactions. Despite hydrogen bonding being the dominant interaction, precise predictions from quantum-chemical calculations highly rely on the consideration of dispersion.

Molecular Geometries and Other Properties of H2O⋯AgI and H3N⋯AgI as Characterised by Rotational Spectroscopy and Ab Initio Calculations

The rotational spectra of H3N⋯AgI and H2O⋯AgI have been recorded between 6.5 and 18.5 GHz by chirped-pulse Fourier-transform microwave spectroscopy. The complexes were generated through laser vaporisation of a solid target of silver or silver iodide in the presence of an argon gas pulse containing a low concentration of the Lewis base. The gaseous sample subsequently undergoes supersonic expansion which results in cooling of rotational and vibrational motions such that weakly bound complexes can form within the expanding gas jet. Spectroscopic parameters have been determined for eight isotopologues of H3N⋯AgI and six isotopologues of H2O⋯AgI. Rotational constants, B0; centrifugal distortion constants, DJ, DJK or ΔJ, ΔJK; and the nuclear quadrupole coupling constants, χaa(I) and χbb(I) - χcc(I) are reported. H3N⋯AgI is shown to adopt a geometry that has C3v symmetry. The geometry of H2O⋯AgI is Cs at equilibrium but with a low barrier to inversion such that the vibrational wavefunction for the v = 0 state has C2v symmetry. Trends in the nuclear quadrupole coupling constant of the iodine nucleus, χaa(I), of L⋯AgI complexes are examined, where L is varied across the series (L = Ar, H3N, H2O, H2S, H3P, or CO). The results of experiments are reported alongside those of ab initio calculations at the CCSD(T)(F12*)/AVXZ level (X = T, Q).

Halogen bonding properties of 4-iodopyrazole and 4-bromopyrazole explored by rotational spectroscopy and ab initio calculations

The combination of halogen- and hydrogen-bonding capabilities possessed by 4-bromopyrazole and 4-iodopyrazole has led to them being described as magic bullets for biochemical structure determination. Laser vaporisation was used to introduce each of these 4-halopyrazoles into an argon gas sample undergoing supersonic expansion prior to the recording of the rotational spectra of these molecules by chirped-pulse Fourier transform microwave spectroscopy. Data were obtained for four isotopologues of 4-bromopyrazole and two isotopologues of 4-iodopyrazole. Isotopic substitutions were achieved at the hydrogens attached to the pyrrolic nitrogen atoms of both 4-halopyrazoles and at the bromine atom of 4-bromopyrazole. The experimentally determined nuclear quadrupole coupling constants, χaa(X) and χbb(X)-χcc(X), of the halogen atoms (where X is the halogen atom) of each molecule are compared with the results of the ab initio calculations and those for a range of other halogen-containing molecules. It is concluded that each of 4-bromopyrazole and 4-iodopyrazole will form halogen bonds that are broadly comparable in strength to those formed by CH3X and CF3X.

ROTATIONAL SPECTRA AND NUCLEAR QUADRUPOLE COUPLING CONSTANTS OF 4-HALOPYRAZOLES C3N2H3X (X = Br, I)

The microwave spectra of the heteroaromatic molecules 4-bromopyrazole and 4-iodopyrazole have been recorded for the first time, along with their N-deuterated isotopologues. These species have recently been found to be useful in structural determination of proteins due to their ability to attach at a variety of binding sites.a The nuclear quadrupole coupling constants have been fitted, and these have been used to determine the nature of the C-X bond, and related to the strength of the halogen bonds formed by the molecules.