Clemens H. M. Kocken
Radboud University Nijmegen
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Featured researches published by Clemens H. M. Kocken.
Molecular and Biochemical Parasitology | 1993
Clemens H. M. Kocken; Josephine Jansen; Anita M. Kaan; Pieter J.A. Beckers; T. Ponnudurai; David C. Kaslow; Ruud N.H. Konings; John G.G. Schoenmakers
The gene encoding the gametocyte/gamete-specific membrane protein Pfs48/45 of Plasmodium falciparum has been cloned. The Pfs48/45 gene is a non-interrupted, single copy gene that codes for a hydrophobic, non-repetitive protein of 448 amino acid residues containing a putative signal peptide at the N-terminus, a hydrophobic C-terminus and 7 potential N-glycosylation sites. Antibodies directed against a Pfs48/45-glutathione-S-transferase fusion protein reacted with both the 45-kDa and 48-kDa proteins of gametocytes. When Pfs48/45 is expressed in the baculovirus-insect cell system the recombinant Pfs48/45 protein is targeted and exposed to the insect cell surface in such a configuration that it is recognized by transmission-blocking anti-45/48-kDa monoclonal antibodies.
Molecular and Biochemical Parasitology | 1991
Inge I.M.D. Moelans; Jacques F. Meis; Clemens H. M. Kocken; Ruud N.H. Konings; John G.G. Schoenmakers
A Plasmodium falciparum cDNA clone was isolated of which the insert is transcribed at high rates as a 1.4-kb mRNA in the sexual stages of the malaria parasite. The cDNA clone contains a copy of a non-interrupted gene which codes for a protein of 157 amino acids (Mr = 16607). This 16-kDa protein does not contain repetitive sequences and is characterised by a putative N-terminal signal sequence, a hydrophobic membrane anchor sequence and a highly hydrophilic C-terminal region suggesting that it is an integral membrane protein. Rabbit antisera raised against a synthetic peptide covering amino acids 31-47 of the 16-kDa protein and against recombinant fusion proteins recognised the 16-kDa antigen in protein extracts of gametocytes, macrogamete/zygotes and sporozoites by Western blot analysis. The rabbit antisera also reacted with gametes, gametocytes and sporozoites in a standard immunofluorescence assay. By immunoelectron microscopy using the protein A-gold method the 16-kDa protein could be clearly visualised on the surface of macrogametes and sporozoites, whereas the antigen was not detectable in the asexual erythrocytic stages of the parasite. The 16-kDa antigen of P. falciparum therefore might have the potential to elicit a dual protective immune response against the sporozoite and sexual stage parasites.
Antimicrobial Agents and Chemotherapy | 2014
Anne-Marie Zeeman; Sandra M. van Amsterdam; Case W. McNamara; Annemarie Voorberg-van der Wel; Els J. Klooster; Alexander van den Berg; Edmond J. Remarque; David Plouffe; Geert-Jan van Gemert; Adrian J. F. Luty; Robert W. Sauerwein; Kerstin Gagaring; Rachel Borboa; Zhong Chen; Kelli Kuhen; Richard Glynne; Arnab K. Chatterjee; Advait Nagle; Jason Roland; Elizabeth A. Winzeler; Didier Leroy; Brice Campo; Thierry T. Diagana; Bryan K. S. Yeung; Alan W. Thomas; Clemens H. M. Kocken
ABSTRACT Preventing relapses of Plasmodium vivax malaria through a radical cure depends on use of the 8-aminoquinoline primaquine, which is associated with safety and compliance issues. For future malaria eradication strategies, new, safer radical curative compounds that efficiently kill dormant liver stages (hypnozoites) will be essential. A new compound with potential radical cure activity was identified using a low-throughput assay of in vitro-cultured hypnozoite forms of Plasmodium cynomolgi (an excellent and accessible model for Plasmodium vivax). In this assay, primary rhesus hepatocytes are infected with P. cynomolgi sporozoites, and exoerythrocytic development is monitored in the presence of compounds. Liver stage cultures are fixed after 6 days and stained with anti-Hsp70 antibodies, and the relative proportions of small (hypnozoite) and large (schizont) forms relative to the untreated controls are determined. This assay was used to screen a series of 18 known antimalarials and 14 new non-8-aminoquinolines (preselected for blood and/or liver stage activity) in three-point 10-fold dilutions (0.1, 1, and 10 μM final concentrations). A novel compound, designated KAI407 showed an activity profile similar to that of primaquine (PQ), efficiently killing the earliest stages of the parasites that become either primary hepatic schizonts or hypnozoites (50% inhibitory concentration [IC50] for hypnozoites, KAI407, 0.69 μM, and PQ, 0.84 μM; for developing liver stages, KAI407, 0.64 μM, and PQ, 0.37 μM). When given as causal prophylaxis, a single oral dose of 100 mg/kg of body weight prevented blood stage parasitemia in mice. From these results, we conclude that KAI407 may represent a new compound class for P. vivax malaria prophylaxis and potentially a radical cure.
Parasite Immunology | 1998
Richard L.B. Milek; Will Roeffen; Clemens H. M. Kocken; Josephine Jansen; Anita M. Kaan; Wijnand Eling; Robert W. Sauerwein; Ruud N.H. Konings
A precondition for the development of a transmission blocking vaccine based on the sexual stage‐specific surface antigen Pfs48/45 of Plasmodium falciparum is its heterologous synthesis in a native state. Here we describe the production of recombinant Pfs48/45 in Escherichia coli. Two recombinant proteins, of which one is a glutathione‐S‐transferase fusion protein, were produced. Enzyme‐linked immunosorbent assays showed that at least a subfraction of the recombinant proteins had a conformation capable of binding transmission blocking monoclonal antibodies. However, despite the fact that both proteins were very immunogenic, they did not induce transmission blocking immunity in mice or rabbits. Immunological studies with congenic mouse strains demonstrated that immune responses could be boosted with gametocyte extracts and were not restricted to a particular class II major histocompatibility complex haplotype.
Bioinformatics | 2009
Rasa Jurgelenaite; Tjeerd M. H. Dijkstra; Clemens H. M. Kocken; Tom Heskes
MOTIVATION To date, there is little knowledge about one of the processes fundamental to the biology of Plasmodium falciparum, gene regulation including transcriptional control. We use noisy threshold models to identify regulatory sequence elements explaining membership to a gene expression cluster where each cluster consists of genes active during the part of the developmental cycle inside a red blood cell. Our approach is both able to capture the combinatorial nature of gene regulation and to incorporate uncertainty about the functionality of putative regulatory sequence elements. RESULTS We find a characteristic pattern where the most common motifs tend to be absent upstream of genes active in the first half of the cycle and present upstream of genes active in the second half. We find no evidence that motifs score, orientation, location and multiplicity improves prediction of gene expression. Through comparative genome analysis, we find a list of potential transcription factors and their associated motifs. SUPPLEMENTARY INFORMATION Supplementary data are available at Bioinformatics online.
Molecular and Biochemical Parasitology | 1995
Clemens H. M. Kocken; Richard L.B. Milek; Ton H.W. Lensen; David C. Kaslow; John G.G. Schoenmakers; Ruud N.H. Konings
Antimicrobial Agents and Chemotherapy | 2016
Anne-Marie Zeeman; Suresh B. Lakshminarayana; Nicole van der Werff; Els J. Klooster; Annemarie Voorberg-van der Wel; Ravinder Reddy Kondreddi; Christophe Bodenreider; Oliver Simon; Robert W. Sauerwein; Bryan K. S. Yeung; Thierry T. Diagana; Clemens H. M. Kocken
Archive | 2001
Clemens H. M. Kocken; Alan W. Thomas; Michael John Blackman; Chrislaine Withers-Martinez; Anthony Arthur Holder
Malaria Journal | 2016
Mahamadou A. Thera; Drissa Coulibaly; Abdoulaye K. Kone; Ando Guindo; Karim Traore; Abdourhamane H. Sall; Issa Diarra; Modibo Daou; Idrissa Traore; Youssouf Tolo; Mady Sissoko; Amadou Niangaly; Charles Arama; Mounirou Baby; Bourema Kouriba; Mahamadou S Sissoko; Issaka Sagara; Ousmane Boubacar Touré; Amagana Dolo; Dapa A. Diallo; Edmond J. Remarque; Roma Chilengi; Ramadhani A. Noor; Sanie S. S. Sesay; Alan W. Thomas; Clemens H. M. Kocken; Bart W. Faber; Egeruan B. Imoukhuede; Odile Leroy; Ogobara K. Doumbo
Archive | 2005
Graham A. Bentley; Brigitte Vulliez-Le-Normand; Juan Carlos Pizarro; Michael John Blackman; Christine R. Collins; Clemens H. M. Kocken; Alan W. Thomas; Sébastien Igonet; Grazyna Faure-Kuzminska; Marie-Madeleine Riottot