Daniel R. Cooley

The impact of ozone on assimilate partitioning in plants: a review.

Numerous studies have shown that ozone (O(3)) reduces plant growth and changes assimilate partitioning. The pattern of such changes varies with species, but trends suggest a comprehensive model. O(3) generally reduces the amount of dry matter in the whole plant. In plants which have not flowered or set fruit, and at low O(3) levels, the remaining available assimilate is generally diverted to leaves and stems at the expense of roots and crowns. As the plant matures, flowers and develops seeds, these sinks receive a relatively high proportion of the available assimilate. O(3) may reduce the number of flowers or seeds, but the remaining seeds often have a total dry matter accumulation comparable to that in non-stressed plants. At higher O(3) levels, assimilate accumulation is greatly depressed, and partitioning changes are not as obvious. However, it is significant that the storage organs of plants-those organs which supply energy for new growth in perennial plants such as trees-are the organs most affected by O(3)-induced partitioning changes when O(3) concentrations are in the range commonly observed in polluted ambient air.

Diversity and Biogeography of Sooty Blotch and Flyspeck Fungi on Apple in the Eastern and Midwestern United States

Sooty blotch and flyspeck (SBFS) fungi on apple fruit were sampled from nine orchards in four midwestern U.S. states during 2000 and 30 orchards in 10 eastern U.S. states during 2005 in order to estimate taxonomic diversity and discern patterns of geographic distribution. Forty apple fruit per orchard were arbitrarily sampled and colonies of each mycelial phenotype were counted on each apple. Representative colonies were isolated, cultures were purified, and DNA was extracted. For representative isolates, the internal transcribed spacer (ITS) and large subunit (LSU) regions of ribosomal DNA were amplified and sequenced. In total, 60 SBFS putative species were identified based on ITS sequences and morphological characteristics; 30 of these were discovered in the 2005 survey. Modified Kochs postulates were fulfilled for all 60 species in an Iowa orchard; colonies resulting from inoculation of apple fruit were matched to the original isolates on the basis of mycelial type and ITS sequence. Parsimony analysis for LSU sequences from both surveys revealed that 58 putative SBFS species were members of the Dothideomycetes, 52 were members of the Capnodiales, and 36 were members of the Mycosphaerellaceae. The number of SBFS species per orchard varied from 2 to 15. Number of SBFS species and values of the Margalef and Shannon indexes were significantly (P < 0.05) lower in 21 orchards that had received conventional fungicide sprays during the fruit maturation period than in 14 unsprayed orchards. Several SBFS species, including Schizothyrium pomi, Peltaster fructicola, and Pseudocercosporella sp. RH1, were nearly ubiquitous, whereas other species, such as Stomiopeltis sp. RS5.2, Phialophora sessilis, and Geastrumia polystigmatis, were found only within restricted geographic regions. The results document that the SBFS complex is far more taxonomically diverse than previously recognized and provide strong evidence that SBFS species differ in geographic distribution. To achieve more efficient management of SBFS, it may be necessary to understand the environmental biology of key SBFS species in each geographic region.

A New View of Sooty Blotch and Flyspeck

Sooty blotch and flyspeck (SBFS) fungi colonize the surface wax layer of the fruit of apple, pear, persimmon, banana, orange, papaya, and several other cultivated tree and vine crops. In addition to colonizing cultivated fruit crops, SBFS fungi also grow on the surfaces of stems, twigs, leaves, and fruit of a wide range of wild plants. The disease occurs worldwide in regions with moist growing seasons. SBFS is regarded as a serious disease by fruit growers and plant pathologists because it can cause substantial economic damage. The smudges and stipples of SBFS often result in downgrading of fruit from premium fresh-market grade to processing use. This review describes the major shifts that have occurred during the past decade in understanding the genetic diversity of the SBFS complex, clarifying its biogeography and environmental biology, and developing improved management strategies.

Summer Pruning as a Method for Reducing Flyspeck Disease on Apple Fruit

Summer pruning of apples, as opposed to the conventional commercial practice of dormant pruning, consistently reduced the incidence of flyspeck on apple fruit by approximately 50% in each of 2 years in trees where no fungicides were applied. In commercial orchard blocks using fungicides, summer pruning also produced a slight but significant decrease in disease severity. There appear to be at least two mechanisms contributing to decreased flyspeck incidence and severity in summer-pruned apple trees. Summer pruning resulted in a small change in the apple canopy microclimate, decreasing the hours of relative humidity >95% in the canopy by 63% and increasing the evaporative potential. Summer pruning also resulted in improved spray deposition in the upper two-thirds of the tree canopy when applications were made with an airblast sprayer.

Second-level integrated pest management in commercial apple orchards

As historical background helpful to understanding current concepts and practices of apple pest management, we review the origin and rise of key pests of apple in North America and the evolution of approaches to their management, culminating with the concept of integrated pest management (IPM). We propose four levels of integration of orchard pest management practices. First-level IPM integrates chemically based and biologically based management tactics for a single class of pests, such as arthropods, diseases, weeds or vertebrates. Second-level IPM, the focus of our effort here, integrates multiple management tactics across all classes of pests. We describe components of second-level IPM for Massachusetts apple orchards, which are threatened each year by an exceptionally broad range of injurious pests. We illustrate the tentative advantages and shortcomings of second-level IPM using 1993 data from six commercial orchard test blocks. Our predominant approach was to use chemically based tactics for controlling arthropods, diseases and weeds early in the growing season, and afterwards to rely exclusively (for insects) or largely (for other pests) on biologically based tactics, such as cultural, behavioral, and biological controls. Compared with nearby first-level IPM blocks, insecticide use in 1993 was reduced substantially (about 30%), with only slightly more insect injury to fruit and little difference in populations of foliar insect pests. The results for mite pests and diseases were less encouraging although summer pruning significantly reduced disease injury caused by flyspeck. We discuss how second-level IPM poses special biological or operational challenges to apple pest management practitioners. The concept has merit, but refinements are necessary before it can be recommended broadly to commercial apple growers in Massachusetts as an economical and reliable alternative to first-level IPM.

Ozone effects on growth and assimilate partitioning in alfalfa, Medicago sativa L.

Alfalfa (Medicago sativa L.) were exposed to O(3) concentrations varying between 118 x 10(-6) microg cm(-3) (0.06 ppm) and 157 x 10(-6) microg cm(-3) (0.08 ppm) for 6 h per day 5 days per week for several weeks. Typical plants were sacrificed weekly, and growth parameters were measured. O(3) reduced overall growth, relative growth rates and unit leaf rates in alfalfa before it was cut, indicating that O(3) had reduced photosynthesis. However, after the alfalfa was cut, these same parameters indicated that in some cases, O(3)-stressed plants had greater photosynthetic rates than controls during regrowth. O(3) also altered dry matter partitioning. Roots were most affected, followed by leaves and stems, respectively. In general, O(3) reduced photosynthate production and reduced the proportion of photosynthate partitioned to roots relative to leaves and stems. This could reduce starch reserves in alfalfa, and be detrimental to stand longevity. However, the post-cutting study indicated that at least some alfalfa cultivars may be able to acclimate to O(3)-stress, though plants did not fully recover from pre-cutting differences.

Disease-management components of advanced integrated pest management in apple orchards

Reducing fungicide use in commercial apple orchards is particularly problematic, although success would positively effect other aspects of orchard ecology, primarily arthropod management, and may alleviate ecological and food-safety concerns. Methods for reducing fungicides were tested in the context of advanced integrated pest management (IPM), in which arthropod pests are managed with minimal use of pesticides following the petal-fall stage of apple growth. The potential ascospore dose (PAD) method for predicting inoculum density of Venturia inaequalis, which causes apple scab, was used in conjunction with ascospore-maturity evaluation and ergosterol-biosynthesis-inhibiting fungicides to manage scab in advanced IPM blocks. In 78% of the cases studied, PAD indicated growers should delay the first fungicide application, but growers actually followed this recommendation in only half of these cases. Where growers followed the recommendation, they applied significantly less fungicide, saving an average of over one application during the primary apple scab season, a 26% reduction. A combination of summer pruning and limited captan use was recommended for management of flyspeck (caused by Schizothyrium pomi) and sooty blotch (caused by three associated fungi). Growers generally followed the advanced IPM recommendations, and during the summer applied 34% less fungicide in the advanced IPM blocks. The program showed that growers could achieve significant fungicide reductions in apples using these methods, although it also indicated that they were sometimes reticent to implement them.

Maturation of Thyriothecia of Schizothyrium pomi on the Reservoir Host Rubus allegheniensis

Flyspeck disease caused by the Ascomycete fungus Schizothyrium pomi is a major component of a summer disease complex that has become an increasing problem on apple in the northeastern United States. This study describes the development of thyriothecia of S. pomi on one of its major reservoir hosts, wild blackberry, and suggests that temperature drives thyriothecium maturation. An empirical model relating thyriothecium maturity to degree-days from apple leaf budbreak in Massachusetts had a high coefficient of determination, R2 = 0.90. Ninety percent of thyriothecia matured between 540 and 1,625 degree-days from the budbreak biofix. S. pomi produced one generation of asci per year on blackberry. This discrete maturation period occurred well before signs of disease developed on apple fruit and before production of conidia. Considering that fungicide applications for scab management in commercial apple orchards also will protect fruit from flyspeck during early fruit development, it is unlikely that ascospores produced on reservoir hosts directly infect fruit. Instead, they probably initiate infections in reservoir hosts adjacent to commercial orchards, which produce conidia that are the inoculum which infects apple fruit in commercial production.

Effectiveness of Odor-Baited Trap Trees for Plum Curculio (Coleoptera: Curculionidae) Monitoring in Commercial Apple Orchards in the Northeast

ABSTRACT The plum curculio, Conotrachelus nenuphar (Herbst), is a key pest of pome and stone fruit in eastern and central North America. For effective management of this insect pest in commercial apple (Malus spp.) orchards in the northeastern United States and Canada, one of the greatest challenges has been to determine the need for and timing of insecticide applications that will protect apple fruit from injury by adults. In a 2004–2005 study, we assessed the efficacy and economic viability of a reduced-risk integrated pest management strategy involving an odor-baited trap tree approach to determine need for and timing of insecticide use against plum curculio based on appearance of fresh egg-laying scars. Evaluations took place in commercial apple orchards in seven northeastern U.S. states. More specifically, we compared the trap-tree approach with three calendar-driven whole-block sprays and with heat-unit accumulation models that predict how long insecticide should be applied to orchard trees to prevent injury by plum curculio late in the season. Trap tree plots received a whole-plot insecticide spray by the time of petal fall, and succeeding sprays (if needed) were applied to peripheral-row trees only, depending on a threshold of one fresh plum curculio egg-laying scar out of 25 fruit sampled from a single trap tree. In both years, level of plum curculio injury to fruit sampled from perimeter-row, the most interior-row trees and whole-plot injury in trap tree plots did not differ significantly from that recorded in plots subject to conventional management or in plots managed using the heat-unit accumulation approach. The amount of insecticide used in trap tree plots was reduced at least by 43% compared with plots managed with the conventional approach. Advantages and potential pitfalls of the bio-based trap tree approach to plum curculio monitoring in apple orchards are discussed.

Prevalence of Myclobutanil Resistance and Difenoconazole Insensitivity in Populations of Venturia inaequalis

Demethylation inhibitors (DMIs) are a class of single-site fungicides with high levels of protective and curative efficacy against Venturia inaequalis, the causal agent of apple scab. To determine the prevalence of resistance to the DMI fungicide myclobutanil, 3,987 single-lesion conidial V. inaequalis isolates from 141 commercial, research, and baseline orchard populations were examined throughout New England, the mid-Atlantic, and the Midwest from 2004 to 2013. Of these orchard populations, 63% had practical resistance, 13% had reduced sensitivity, and 24% were sensitive to myclobutanil. A sensitivity baseline for the recently introduced DMI fungicide difenoconazole was established to make comparisons with myclobutanil sensitivity in orchard populations. The mean effective concentration of difenoconazole at which mycelial growth was inhibited by 50% (EC50) was determined to be 0.002 μg ml-1 for 44 baseline isolates of V. inaequalis. From 2010 to 2013, 1,012 isolates of V. inaequalis from 37 of the 141 orchard populations above were screened for sensitivity to difenoconazole. In all, 1 orchard population had reduced sensitivity to difenoconazole, while the remaining 36 orchard populations were sensitive to the fungicide. In field experiments, difenoconazole demonstrated high levels of apple scab control on mature apple fruit, despite the fact that the population of V. inaequalis had practical resistance to difenoconazole. Although our results indicate widespread resistance to myclobutanil but not difenoconazole, due to the propensity for cross-sensitivity among DMI fungicides, growers with myclobutanil resistance should be cautious when using difenoconazole for disease management.