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Dive into the research topics where David Gygi is active.

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Featured researches published by David Gygi.


Nature | 2015

Cooperative insertion of CO2 in diamine-appended metal-organic frameworks

Thomas M. McDonald; Jarad A. Mason; Xueqian Kong; Eric D. Bloch; David Gygi; Alessandro Dani; Valentina Crocellà; Filippo Giordanino; Samuel O. Odoh; Walter S. Drisdell; Bess Vlaisavljevich; Allison L. Dzubak; Roberta Poloni; Sondre K. Schnell; Nora Planas; Kyuho Lee; Tod A. Pascal; Liwen F. Wan; David Prendergast; Jeffrey B. Neaton; Berend Smit; J. B. Kortright; Laura Gagliardi; Silvia Bordiga; Jeffrey A. Reimer; Jeffrey R. Long

The process of carbon capture and sequestration has been proposed as a method of mitigating the build-up of greenhouse gases in the atmosphere. If implemented, the cost of electricity generated by a fossil fuel-burning power plant would rise substantially, owing to the expense of removing CO2 from the effluent stream. There is therefore an urgent need for more efficient gas separation technologies, such as those potentially offered by advanced solid adsorbents. Here we show that diamine-appended metal-organic frameworks can behave as ‘phase-change’ adsorbents, with unusual step-shaped CO2 adsorption isotherms that shift markedly with temperature. Results from spectroscopic, diffraction and computational studies show that the origin of the sharp adsorption step is an unprecedented cooperative process in which, above a metal-dependent threshold pressure, CO2 molecules insert into metal-amine bonds, inducing a reorganization of the amines into well-ordered chains of ammonium carbamate. As a consequence, large CO2 separation capacities can be achieved with small temperature swings, and regeneration energies appreciably lower than achievable with state-of-the-art aqueous amine solutions become feasible. The results provide a mechanistic framework for designing highly efficient adsorbents for removing CO2 from various gas mixtures, and yield insights into the conservation of Mg2+ within the ribulose-1,5-bisphosphate carboxylase/oxygenase family of enzymes.


Chemical Science | 2014

Comprehensive study of carbon dioxide adsorption in the metal–organic frameworks M2(dobdc) (M = Mg, Mn, Fe, Co, Ni, Cu, Zn)

Wendy L. Queen; Matthew R. Hudson; Eric D. Bloch; Jarad A. Mason; Miguel I. Gonzalez; Jason S. Lee; David Gygi; Joshua D. Howe; Kyuho Lee; Tamim A. Darwish; Michael James; Vanessa K. Peterson; Simon J. Teat; Berend Smit; Jeffrey B. Neaton; Jeffrey R. Long; Craig M. Brown

Analysis of the CO2 adsorption properties of a well-known series of metal–organic frameworks M2(dobdc) (dobdc4− = 2,5-dioxido-1,4-benzenedicarboxylate; M = Mg, Mn, Fe, Co, Ni, Cu, and Zn) is carried out in tandem with in situ structural studies to identify the host–guest interactions that lead to significant differences in isosteric heats of CO2 adsorption. Neutron and X-ray powder diffraction and single crystal X-ray diffraction experiments are used to unveil the site-specific binding properties of CO2 within many of these materials while systematically varying both the amount of CO2 and the temperature. Unlike previous studies, we show that CO2 adsorbed at the metal cations exhibits intramolecular angles with minimal deviations from 180°, a finding that indicates a strongly electrostatic and physisorptive interaction with the framework surface and sheds more light on the ongoing discussion regarding whether CO2 adsorbs in a linear or nonlinear geometry. This has important implications for proposals that have been made to utilize these materials for the activation and chemical conversion of CO2. For the weaker CO2 adsorbents, significant elongation of the metal–O(CO2) distances are observed and diffraction experiments additionally reveal that secondary CO2 adsorption sites, while likely stabilized by the population of the primary adsorption sites, significantly contribute to adsorption behavior at ambient temperature. Density functional theory calculations including van der Waals dispersion quantitatively corroborate and rationalize observations regarding intramolecular CO2 angles and trends in relative geometric properties and heats of adsorption in the M2(dobdc)–CO2 adducts.


Nature | 2015

Cooperative insertion of CO2 in diamineappended metal-organic frameworks

Thomas M. McDonald; Jarad A. Mason; Xueqian Kong; Eric D. Bloch; David Gygi; Alessandro Dani; Valentina Crocellà; Filippo Giordanino; Samuel O. Odoh; Walter S. Drisdell; Bess Vlaisavljevich; Allison L. Dzubak; Roberta Poloni; Sondre K. Schnell; Nora Planas; Kyuho Lee; Tod A. Pascal; Liwen F. Wan; David Prendergast; Jeffrey B. Neaton; Berend Smit; Jeffrey B. Kortright; Laura Gagliardi; Silvia Bordiga; Jeffrey A. Reimer; Jeffrey R. Long

The process of carbon capture and sequestration has been proposed as a method of mitigating the build-up of greenhouse gases in the atmosphere. If implemented, the cost of electricity generated by a fossil fuel-burning power plant would rise substantially, owing to the expense of removing CO2 from the effluent stream. There is therefore an urgent need for more efficient gas separation technologies, such as those potentially offered by advanced solid adsorbents. Here we show that diamine-appended metal-organic frameworks can behave as ‘phase-change’ adsorbents, with unusual step-shaped CO2 adsorption isotherms that shift markedly with temperature. Results from spectroscopic, diffraction and computational studies show that the origin of the sharp adsorption step is an unprecedented cooperative process in which, above a metal-dependent threshold pressure, CO2 molecules insert into metal-amine bonds, inducing a reorganization of the amines into well-ordered chains of ammonium carbamate. As a consequence, large CO2 separation capacities can be achieved with small temperature swings, and regeneration energies appreciably lower than achievable with state-of-the-art aqueous amine solutions become feasible. The results provide a mechanistic framework for designing highly efficient adsorbents for removing CO2 from various gas mixtures, and yield insights into the conservation of Mg2+ within the ribulose-1,5-bisphosphate carboxylase/oxygenase family of enzymes.


Journal of Organic Chemistry | 2017

Scalable Syntheses of 4-Substituted Pyridine–Diimines

David Gygi; Seung Jun Hwang; Daniel G. Nocera

A concise benchtop and scalable synthesis of pyridine-diimine (PDI) ligand frameworks is presented using inexpensive commercial starting materials as opposed to previous syntheses of these ligands, which have confronted long and tedious routes that employ toxic and often difficult to scale pyrophoric reagents. The streamlined synthesis is derived from the facile delivery of 4-functionalized diacetylpyridines from a Minisci reaction using pyruvic acid, silver nitrate, and persulfate. As the PDI ligand scaffold has been adopted for a range of catalytic applications, the ability to modulate the electronic properties of the ligand with facility may be useful for optimizing a variety of catalytic transformations.


Nature | 2016

Cooperative insertion of CO[subscript 2] in diamine-appended metal-organic frameworks

Thomas M. McDonald; Jarad A. Mason; Xueqian Kong; Eric D. Bloch; David Gygi; Alessandro Dani; Valentina Crocellà; Filippo Giordanino; Samuel O. Odoh; Walter S. Drisdell; Bess Vlaisavljevich; Allison L. Dzubak; Roberta Poloni; Sondre K. Schnell; Nora Planas; Kyuho Lee; Tod A. Pascal; Liwen F. Wan; David Prendergast; Jeffrey B. Neaton; Berend Smit; Jeffrey B. Kortright; Laura Gagliardi; Silvia Bordiga; Jeffrey A. Reimer; Jeffrey R. Long; Grenoble ; Turin

The process of carbon capture and sequestration has been proposed as a method of mitigating the build-up of greenhouse gases in the atmosphere. If implemented, the cost of electricity generated by a fossil fuel-burning power plant would rise substantially, owing to the expense of removing CO2 from the effluent stream. There is therefore an urgent need for more efficient gas separation technologies, such as those potentially offered by advanced solid adsorbents. Here we show that diamine-appended metal-organic frameworks can behave as ‘phase-change’ adsorbents, with unusual step-shaped CO2 adsorption isotherms that shift markedly with temperature. Results from spectroscopic, diffraction and computational studies show that the origin of the sharp adsorption step is an unprecedented cooperative process in which, above a metal-dependent threshold pressure, CO2 molecules insert into metal-amine bonds, inducing a reorganization of the amines into well-ordered chains of ammonium carbamate. As a consequence, large CO2 separation capacities can be achieved with small temperature swings, and regeneration energies appreciably lower than achievable with state-of-the-art aqueous amine solutions become feasible. The results provide a mechanistic framework for designing highly efficient adsorbents for removing CO2 from various gas mixtures, and yield insights into the conservation of Mg2+ within the ribulose-1,5-bisphosphate carboxylase/oxygenase family of enzymes.


Chemistry of Materials | 2016

Hydrogen Storage in the Expanded Pore Metal–Organic Frameworks M2(dobpdc) (M = Mg, Mn, Fe, Co, Ni, Zn)

David Gygi; Eric D. Bloch; Jarad A. Mason; Matthew R. Hudson; Miguel I. Gonzalez; Rebecca L. Siegelman; Tamim A. Darwish; Wendy L. Queen; Craig M. Brown; Jeffrey R. Long


ACS Catalysis | 2014

Selective Propene Oligomerization with Nickel(II)-Based Metal–Organic Frameworks

Anton N. Mlinar; Benjamin K. Keitz; David Gygi; Eric D. Bloch; Jeffrey R. Long; Alexis T. Bell


Chemical Science | 2018

Overcoming double-step CO2 adsorption and minimizing water co-adsorption in bulky diamine-appended variants of Mg2(dobpdc)

Phillip J. Milner; Jeffrey Martell; Rebecca L. Siegelman; David Gygi; Simon C. Weston; Jeffrey R. Long


Microporous and Mesoporous Materials | 2015

NMR relaxation and exchange in metal–organic frameworks for surface area screening

Joseph J. Chen; Jarad A. Mason; Eric D. Bloch; David Gygi; Jeffrey R. Long; Jeffrey A. Reimer


Archive | 2018

Overcoming double-step CO2 adsorption and minimizing water co-adsorption in bulky diamine-appended variants of Mg2(dobpdc)† †Electronic supplementary information (ESI) available: Additional experimental details, and full characterization (powder X-ray diffraction, infrared spectra, diamine loadings, dry N2 decomposition profiles, and CO2 adsorption data) for all new adsorbents. CCDC 1577354. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c7sc04266c

Phillip J. Milner; Jeffrey D. Martell; Rebecca L. Siegelman; David Gygi; Simon C. Weston; Jeffrey R. Long

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Eric D. Bloch

Lawrence Berkeley National Laboratory

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Jeffrey R. Long

Lawrence Berkeley National Laboratory

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Jarad A. Mason

University of California

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Wendy L. Queen

École Polytechnique Fédérale de Lausanne

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Berend Smit

École Polytechnique Fédérale de Lausanne

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